RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 C2orf82Q6UX34 121 aa14.79□□□□□ -0.04
CSPG5-201ENST00000264723 PIFOQ8TCI5 191 aa14.79□□□□□ -0.04
CSPG5-201ENST00000264723 K7EQG2 157 aa14.79□□□□□ -0.04
CSPG5-201ENST00000264723 ESM1Q9NQ30 184 aa14.79□□□□□ -0.04
CSPG5-201ENST00000264723 MALP21145 153 aa14.78□□□□□ -0.04
CSPG5-201ENST00000264723 PSMB8P28062 276 aa14.78□□□□□ -0.04
CSPG5-201ENST00000264723 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.77□□□□□ -0.04
CSPG5-201ENST00000264723 SLC25A20O43772 301 aa14.77□□□□□ -0.05
CSPG5-201ENST00000264723 CLPSL2Q6UWE3 100 aa14.77□□□□□ -0.05
CSPG5-201ENST00000264723 NTN5Q8WTR8 489 aaPredicted RBP14.77□□□□□ -0.05
CSPG5-201ENST00000264723 DNAL4O96015 105 aa14.76□□□□□ -0.05
CSPG5-201ENST00000264723 UFSP1Q6NVU6 142 aa14.76□□□□□ -0.05
CSPG5-201ENST00000264723 Q6ZSV7 163 aa14.76□□□□□ -0.05
CSPG5-201ENST00000264723 TSPAN13O95857 204 aa14.76□□□□□ -0.05
CSPG5-201ENST00000264723 C3orf56Q8N813 242 aa14.76□□□□□ -0.05
CSPG5-201ENST00000264723 SMG1Q96Q15 3661 aaKnown RBP14.76□□□□□ -0.05
CSPG5-201ENST00000264723 A8MZ25 164 aa14.75□□□□□ -0.05
CSPG5-201ENST00000264723 F5H768 121 aa14.75□□□□□ -0.05
CSPG5-201ENST00000264723 CFC1BP0CG36 223 aa14.75□□□□□ -0.05
CSPG5-201ENST00000264723 CFC1P0CG37 223 aa14.75□□□□□ -0.05
CSPG5-201ENST00000264723 ANAPC13Q9BS18 74 aa14.75□□□□□ -0.05
CSPG5-201ENST00000264723 FLNAP21333 2647 aaKnown RBP14.75□□□□□ -0.05
CSPG5-201ENST00000264723 IGLV2-18A0A075B6J9 118 aa14.75□□□□□ -0.05
CSPG5-201ENST00000264723 CFAP161Q6P656 301 aa14.75□□□□□ -0.05
CSPG5-201ENST00000264723 C6orf226Q5I0X4 101 aa14.74□□□□□ -0.05
CSPG5-201ENST00000264723 PPDPFLQ8WWR9 84 aa14.74□□□□□ -0.05
CSPG5-201ENST00000264723 COL27A1Q8IZC6 1860 aaPredicted RBP14.74□□□□□ -0.05
CSPG5-201ENST00000264723 A0A0J9YY99 117 aa14.74□□□□□ -0.05
CSPG5-201ENST00000264723 DEFB4AO15263 64 aa14.74□□□□□ -0.05
CSPG5-201ENST00000264723 USP24Q9UPU5 2620 aa14.74□□□□□ -0.05
CSPG5-201ENST00000264723 MAP6D1Q9H9H5 199 aa14.73□□□□□ -0.05
CSPG5-201ENST00000264723 ATXN8Q156A1 80 aa14.73□□□□□ -0.05
CSPG5-201ENST00000264723 MORN3Q6PF18 240 aaPredicted RBP14.73□□□□□ -0.05
CSPG5-201ENST00000264723 C10orf126Q8N4M7 172 aa14.73□□□□□ -0.05
CSPG5-201ENST00000264723 COX8CQ7Z4L0 72 aa14.72□□□□□ -0.05
CSPG5-201ENST00000264723 ZNF702PQ9H963 129 aa14.72□□□□□ -0.05
CSPG5-201ENST00000264723 SPANXB1Q9NS25 103 aaPredicted RBP14.72□□□□□ -0.05
CSPG5-201ENST00000264723 TRBV20-1A0A075B6N2 111 aa14.72□□□□□ -0.05
CSPG5-201ENST00000264723 TRAV8-4A0A0B4J246 113 aa14.72□□□□□ -0.05
CSPG5-201ENST00000264723 DEFB121Q5J5C9 76 aa14.72□□□□□ -0.05
CSPG5-201ENST00000264723 NDUFA11Q86Y39 141 aa14.72□□□□□ -0.05
CSPG5-201ENST00000264723 C20orf203Q8NBC4 194 aa14.72□□□□□ -0.05
CSPG5-201ENST00000264723 COPS9Q8WXC6 57 aa14.72□□□□□ -0.05
CSPG5-201ENST00000264723 TMEM89A2RUT3 159 aa14.72□□□□□ -0.05
CSPG5-201ENST00000264723 PAX4O43316 350 aa14.72□□□□□ -0.05
CSPG5-201ENST00000264723 C4orf3Q8WVX3 66 aa14.71□□□□□ -0.05
CSPG5-201ENST00000264723 TMEM243Q9BU79 118 aa14.71□□□□□ -0.05
CSPG5-201ENST00000264723 ITPR3Q14573 2671 aa14.71□□□□□ -0.05
CSPG5-201ENST00000264723 TCL1BO95988 128 aa14.71□□□□□ -0.05
CSPG5-201ENST00000264723 IGLV1-40P01703 118 aa14.71□□□□□ -0.05
CSPG5-201ENST00000264723 PFN2P35080 140 aa14.71□□□□□ -0.05
CSPG5-201ENST00000264723 GAGE2BQ13066 116 aa14.71□□□□□ -0.05
CSPG5-201ENST00000264723 GAGE2EQ4V326 116 aa14.71□□□□□ -0.05
CSPG5-201ENST00000264723 GAGE2DQ9UEU5 116 aa14.71□□□□□ -0.05
CSPG5-201ENST00000264723 H3BMM0 161 aa14.71□□□□□ -0.05
CSPG5-201ENST00000264723 F8P00451 2351 aa14.71□□□□□ -0.06
CSPG5-201ENST00000264723 TIMM17AQ99595 171 aa14.71□□□□□ -0.06
CSPG5-201ENST00000264723 RHOHQ15669 191 aa14.7□□□□□ -0.06
CSPG5-201ENST00000264723 ZMAT4Q9H898 229 aa14.7□□□□□ -0.06
CSPG5-201ENST00000264723 FOXI1Q12951 378 aa14.7□□□□□ -0.06
CSPG5-201ENST00000264723 DAD1P61803 113 aa14.69□□□□□ -0.06
CSPG5-201ENST00000264723 M0QY20 66 aa14.69□□□□□ -0.06
CSPG5-201ENST00000264723 LEPROTO15243 131 aa14.69□□□□□ -0.06
CSPG5-201ENST00000264723 DEFB114Q30KQ6 69 aa14.69□□□□□ -0.06
CSPG5-201ENST00000264723 PSMG3-AS1Q96PY0 264 aa14.68□□□□□ -0.06
CSPG5-201ENST00000264723 TRBV7-3A0A075B6L6 115 aa14.68□□□□□ -0.06
CSPG5-201ENST00000264723 IGHV4-4A0A075B6R2 117 aa14.68□□□□□ -0.06
CSPG5-201ENST00000264723 IGHV3-30-3P0DP02 117 aa14.68□□□□□ -0.06
CSPG5-201ENST00000264723 ZFAND6Q6FIF0 208 aa14.68□□□□□ -0.06
CSPG5-201ENST00000264723 DCANP1Q8TF63 244 aa14.68□□□□□ -0.06
CSPG5-201ENST00000264723 MED14OSP0DP75 135 aa14.68□□□□□ -0.06
CSPG5-201ENST00000264723 ANKRD29Q8N6D5 301 aa14.68□□□□□ -0.06
CSPG5-201ENST00000264723 SMR3AQ99954 134 aa14.68□□□□□ -0.06
CSPG5-201ENST00000264723 ZNF580Q9UK33 172 aa14.68□□□□□ -0.06
CSPG5-201ENST00000264723 Q9H8V8 135 aa14.67□□□□□ -0.06
CSPG5-201ENST00000264723 POLR2KP53803 58 aaKnown RBP14.66□□□□□ -0.06
CSPG5-201ENST00000264723 WFDC10AQ9H1F0 79 aa14.66□□□□□ -0.06
CSPG5-201ENST00000264723 KLLNB2CW77 178 aa14.65□□□□□ -0.06
CSPG5-201ENST00000264723 FLNCQ14315 2725 aa14.65□□□□□ -0.06
CSPG5-201ENST00000264723 Q6ZTI0 123 aa14.65□□□□□ -0.06
CSPG5-201ENST00000264723 Q6ZUT4 128 aa14.65□□□□□ -0.06
CSPG5-201ENST00000264723 CRYGDP07320 174 aa14.65□□□□□ -0.06
CSPG5-201ENST00000264723 TSPEAR-AS2P59090 65 aa14.64□□□□□ -0.07
CSPG5-201ENST00000264723 NXPH4O95158 308 aa14.64□□□□□ -0.07
CSPG5-201ENST00000264723 ZNF22P17026 224 aaPredicted RBP14.64□□□□□ -0.07
CSPG5-201ENST00000264723 LRRC75A-AS1Q8N1F1 130 aa14.64□□□□□ -0.07
CSPG5-201ENST00000264723 CLEC2BQ92478 149 aa14.64□□□□□ -0.07
CSPG5-201ENST00000264723 CRPP02741 224 aa14.64□□□□□ -0.07
CSPG5-201ENST00000264723 TEN1Q86WV5 123 aa14.64□□□□□ -0.07
CSPG5-201ENST00000264723 HELZ2Q9BYK8 2649 aaKnown RBP14.64□□□□□ -0.07
CSPG5-201ENST00000264723 ATRQ13535 2644 aa14.63□□□□□ -0.07
CSPG5-201ENST00000264723 C5orf38Q86SI9 138 aa14.63□□□□□ -0.07
CSPG5-201ENST00000264723 IGLV4-3A0A075B6K6 122 aa14.63□□□□□ -0.07
CSPG5-201ENST00000264723 SLC25A29Q8N8R3 303 aa14.63□□□□□ -0.07
CSPG5-201ENST00000264723 INAFM1C9JVW0 142 aa14.62□□□□□ -0.07
CSPG5-201ENST00000264723 LGALS9O00182 355 aa14.62□□□□□ -0.07
CSPG5-201ENST00000264723 DEFB135Q30KP9 77 aa14.62□□□□□ -0.07
CSPG5-201ENST00000264723 CARD19Q96LW7 228 aa14.62□□□□□ -0.07
CSPG5-201ENST00000264723 IGIPA6NJ69 53 aa14.61□□□□□ -0.07
CSPG5-201ENST00000264723 SOCS3O14543 225 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms