RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 LINC00308Q8TCZ7 52 aa9.05□□□□□ -0.96
CHMP2B-201ENST00000263780 CITED2Q99967 270 aaPredicted RBP9.05□□□□□ -0.96
CHMP2B-201ENST00000263780 ANKRD11Q6UB99 2663 aaPredicted RBP9.05□□□□□ -0.96
CHMP2B-201ENST00000263780 CFHR3Q02985 330 aa9.05□□□□□ -0.96
CHMP2B-201ENST00000263780 RNASE13Q5GAN3 156 aaKnown RBP9.04□□□□□ -0.96
CHMP2B-201ENST00000263780 C9orf153Q5TBE3 101 aa9.04□□□□□ -0.96
CHMP2B-201ENST00000263780 DUX5Q96PT3 197 aa9.04□□□□□ -0.96
CHMP2B-201ENST00000263780 PEMTQ9UBM1 199 aa9.04□□□□□ -0.96
CHMP2B-201ENST00000263780 A8MZ25 164 aa9.04□□□□□ -0.96
CHMP2B-201ENST00000263780 INAFM2P0DMQ5 153 aa9.04□□□□□ -0.96
CHMP2B-201ENST00000263780 BLCAPP62952 87 aa9.04□□□□□ -0.96
CHMP2B-201ENST00000263780 DAND5Q8N907 189 aa9.04□□□□□ -0.96
CHMP2B-201ENST00000263780 IGHV3-73A0A0B4J1V6 119 aa9.03□□□□□ -0.96
CHMP2B-201ENST00000263780 A0A1W2PPR1 153 aa9.03□□□□□ -0.96
CHMP2B-201ENST00000263780 EDN2P20800 178 aa9.03□□□□□ -0.96
CHMP2B-201ENST00000263780 HERVK_113P63121 156 aa9.03□□□□□ -0.96
CHMP2B-201ENST00000263780 KLRB1Q12918 225 aa9.03□□□□□ -0.96
CHMP2B-201ENST00000263780 TMEM89A2RUT3 159 aa9.03□□□□□ -0.96
CHMP2B-201ENST00000263780 FAM222AQ5U5X8 452 aa9.03□□□□□ -0.96
CHMP2B-201ENST00000263780 DGAT2L7PQ6IED9 249 aa9.03□□□□□ -0.96
CHMP2B-201ENST00000263780 PPDPFQ9H3Y8 114 aa9.03□□□□□ -0.96
CHMP2B-201ENST00000263780 CDKN2A-AS1Q9UH64 79 aa9.03□□□□□ -0.96
CHMP2B-201ENST00000263780 SPTBN2O15020 2390 aa9.02□□□□□ -0.97
CHMP2B-201ENST00000263780 NDUFA7O95182 113 aa9.02□□□□□ -0.97
CHMP2B-201ENST00000263780 SDIM1Q6ZPB5 146 aa9.02□□□□□ -0.97
CHMP2B-201ENST00000263780 LINC00526Q96FQ7 95 aa9.02□□□□□ -0.97
CHMP2B-201ENST00000263780 MED13LQ71F56 2210 aa9.02□□□□□ -0.97
CHMP2B-201ENST00000263780 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.02□□□□□ -0.97
CHMP2B-201ENST00000263780 IGKV2-29A2NJV5 120 aaPredicted RBP9.02□□□□□ -0.97
CHMP2B-201ENST00000263780 BAALC-AS2P0C853 105 aa9.02□□□□□ -0.97
CHMP2B-201ENST00000263780 ZNF415Q09FC8 603 aa9.02□□□□□ -0.97
CHMP2B-201ENST00000263780 IGLV5-39A0A0G2JS06 123 aa9.01□□□□□ -0.97
CHMP2B-201ENST00000263780 DAZ2Q13117 558 aaKnown RBP9.01□□□□□ -0.97
CHMP2B-201ENST00000263780 DAZ4Q86SG3 579 aaKnown RBP9.01□□□□□ -0.97
CHMP2B-201ENST00000263780 Q9H8V8 135 aa9.01□□□□□ -0.97
CHMP2B-201ENST00000263780 DAZ3Q9NR90 486 aaKnown RBP9.01□□□□□ -0.97
CHMP2B-201ENST00000263780 VPREB3Q9UKI3 123 aa9.01□□□□□ -0.97
CHMP2B-201ENST00000263780 PSMB8P28062 276 aa9.01□□□□□ -0.97
CHMP2B-201ENST00000263780 TMEM95Q3KNT9 176 aa9.01□□□□□ -0.97
CHMP2B-201ENST00000263780 LINC00467Q9BRT7 94 aa9.01□□□□□ -0.97
CHMP2B-201ENST00000263780 PROK1P58294 105 aa9□□□□□ -0.97
CHMP2B-201ENST00000263780 C5orf38Q86SI9 138 aa9□□□□□ -0.97
CHMP2B-201ENST00000263780 OVOL2Q9BRP0 275 aa9□□□□□ -0.97
CHMP2B-201ENST00000263780 GVINP1Q7Z2Y8 2422 aa9□□□□□ -0.97
CHMP2B-201ENST00000263780 PF4P02776 101 aa9□□□□□ -0.97
CHMP2B-201ENST00000263780 IGHV4-38-2P0DP08 117 aa9□□□□□ -0.97
CHMP2B-201ENST00000263780 PIMREGQ9BSJ6 248 aa9□□□□□ -0.97
CHMP2B-201ENST00000263780 BSNQ9UPA5 3926 aa8.99□□□□□ -0.97
CHMP2B-201ENST00000263780 CSMD1Q96PZ7 3565 aa8.99□□□□□ -0.97
CHMP2B-201ENST00000263780 IGHV3-53P01767 116 aa8.99□□□□□ -0.97
CHMP2B-201ENST00000263780 HTN1P15515 57 aa8.99□□□□□ -0.97
CHMP2B-201ENST00000263780 SMCR5Q8TEV8 140 aa8.99□□□□□ -0.97
CHMP2B-201ENST00000263780 FAM19A3Q7Z5A8 133 aa8.98□□□□□ -0.97
CHMP2B-201ENST00000263780 LRBAP50851 2863 aa8.98□□□□□ -0.97
CHMP2B-201ENST00000263780 NRGNQ92686 78 aa8.98□□□□□ -0.97
CHMP2B-201ENST00000263780 TRAV13-2A0A0B4J235 113 aa8.97□□□□□ -0.97
CHMP2B-201ENST00000263780 COX7CP15954 63 aa8.97□□□□□ -0.97
CHMP2B-201ENST00000263780 BEAN1Q3B7T3 259 aa8.97□□□□□ -0.97
CHMP2B-201ENST00000263780 LRRC75A-AS1Q8N1F1 130 aa8.97□□□□□ -0.97
CHMP2B-201ENST00000263780 DCHS2Q6V1P9 2916 aa8.97□□□□□ -0.97
CHMP2B-201ENST00000263780 KNCNA6PVL3 124 aa8.97□□□□□ -0.97
CHMP2B-201ENST00000263780 ATOX1O00244 68 aa8.97□□□□□ -0.97
CHMP2B-201ENST00000263780 A0A1B0GX51 115 aa8.96□□□□□ -0.97
CHMP2B-201ENST00000263780 A8MTW9 85 aa8.96□□□□□ -0.97
CHMP2B-201ENST00000263780 UCNP55089 124 aa8.96□□□□□ -0.97
CHMP2B-201ENST00000263780 HIST2H2BCQ6DN03 193 aa8.96□□□□□ -0.97
CHMP2B-201ENST00000263780 HIST2H2BDQ6DRA6 164 aa8.96□□□□□ -0.97
CHMP2B-201ENST00000263780 PRIMA1Q86XR5 153 aa8.96□□□□□ -0.97
CHMP2B-201ENST00000263780 C3orf56Q8N813 242 aa8.96□□□□□ -0.97
CHMP2B-201ENST00000263780 RBMY1A1P0DJD3 496 aaKnown RBP8.96□□□□□ -0.98
CHMP2B-201ENST00000263780 RBMY1CP0DJD4 496 aa8.96□□□□□ -0.98
CHMP2B-201ENST00000263780 LINC00694P0DN24 101 aa8.96□□□□□ -0.98
CHMP2B-201ENST00000263780 SYNJ2BPP57105 145 aa8.96□□□□□ -0.98
CHMP2B-201ENST00000263780 RBMY1FQ15415 496 aaKnown RBP8.96□□□□□ -0.98
CHMP2B-201ENST00000263780 Q6ZSN1 163 aa8.96□□□□□ -0.98
CHMP2B-201ENST00000263780 SPTBN1Q01082 2364 aaKnown RBP8.96□□□□□ -0.98
CHMP2B-201ENST00000263780 DMXL1Q9Y485 3027 aa8.95□□□□□ -0.98
CHMP2B-201ENST00000263780 LINC00242Q5T6M2 205 aa8.95□□□□□ -0.98
CHMP2B-201ENST00000263780 IGHV3OR16-12A0A075B7B8 117 aa8.95□□□□□ -0.98
CHMP2B-201ENST00000263780 J3KT08 172 aa8.95□□□□□ -0.98
CHMP2B-201ENST00000263780 MALP21145 153 aa8.95□□□□□ -0.98
CHMP2B-201ENST00000263780 COX6A2Q02221 97 aa8.95□□□□□ -0.98
CHMP2B-201ENST00000263780 GAGE2AQ6NT46 116 aa8.95□□□□□ -0.98
CHMP2B-201ENST00000263780 CSDC2Q9Y534 153 aaKnown RBP8.95□□□□□ -0.98
CHMP2B-201ENST00000263780 AKAP13Q12802 2813 aa8.94□□□□□ -0.98
CHMP2B-201ENST00000263780 IGHV3-38A0A0C4DH36 116 aa8.94□□□□□ -0.98
CHMP2B-201ENST00000263780 IGHV4-61A0A0C4DH41 118 aa8.94□□□□□ -0.98
CHMP2B-201ENST00000263780 SMIM1B2RUZ4 78 aa8.94□□□□□ -0.98
CHMP2B-201ENST00000263780 RS1O15537 224 aa8.94□□□□□ -0.98
CHMP2B-201ENST00000263780 CRYGAP11844 174 aa8.94□□□□□ -0.98
CHMP2B-201ENST00000263780 RPL28P46779 137 aaKnown RBP8.94□□□□□ -0.98
CHMP2B-201ENST00000263780 Q8N2B8 174 aa8.94□□□□□ -0.98
CHMP2B-201ENST00000263780 ZNF625Q96I27 306 aaPredicted RBP8.94□□□□□ -0.98
CHMP2B-201ENST00000263780 ATMQ13315 3056 aa8.94□□□□□ -0.98
CHMP2B-201ENST00000263780 TLN1Q9Y490 2541 aaKnown RBP8.94□□□□□ -0.98
CHMP2B-201ENST00000263780 SOSTDC1Q6X4U4 206 aa8.94□□□□□ -0.98
CHMP2B-201ENST00000263780 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.94□□□□□ -0.98
CHMP2B-201ENST00000263780 A0A0U1RRA0 63 aa8.93□□□□□ -0.98
CHMP2B-201ENST00000263780 DEFB131AP59861 70 aa8.93□□□□□ -0.98
CHMP2B-201ENST00000263780 RPS28P62857 69 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms