RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 PMCHL2Q9BQD1 86 aa12.8□□□□□ -0.36
SDF4-201ENST00000263741 hDV102S1A0JD36 115 aa12.79□□□□□ -0.36
SDF4-201ENST00000263741 NXPH4O95158 308 aa12.79□□□□□ -0.36
SDF4-201ENST00000263741 CRYBA4P53673 196 aa12.79□□□□□ -0.36
SDF4-201ENST00000263741 MSRB1Q9NZV6 116 aa12.79□□□□□ -0.36
SDF4-201ENST00000263741 HHLA3Q9XRX5 114 aa12.79□□□□□ -0.36
SDF4-201ENST00000263741 A8MWV9 139 aa12.79□□□□□ -0.36
SDF4-201ENST00000263741 H0Y8G0 127 aa12.79□□□□□ -0.36
SDF4-201ENST00000263741 FAM104BQ5XKR9 115 aa12.79□□□□□ -0.36
SDF4-201ENST00000263741 PRELID3AQ96N28 172 aa12.79□□□□□ -0.36
SDF4-201ENST00000263741 SACSQ9NZJ4 4579 aa12.79□□□□□ -0.36
SDF4-201ENST00000263741 DNAH1Q9P2D7 4330 aa12.78□□□□□ -0.36
SDF4-201ENST00000263741 LOC100131303A0A0U1RQF7 123 aa12.78□□□□□ -0.36
SDF4-201ENST00000263741 D6R8Y8 96 aa12.78□□□□□ -0.36
SDF4-201ENST00000263741 PAX4O43316 350 aa12.78□□□□□ -0.36
SDF4-201ENST00000263741 Q6ZSN1 163 aa12.78□□□□□ -0.36
SDF4-201ENST00000263741 PRO0255Q9UI72 69 aa12.78□□□□□ -0.36
SDF4-201ENST00000263741 LINC00476Q8WZB0 136 aa12.77□□□□□ -0.36
SDF4-201ENST00000263741 LY6G6CO95867 125 aa12.77□□□□□ -0.37
SDF4-201ENST00000263741 PIK3CD-AS1Q5SR53 167 aa12.77□□□□□ -0.37
SDF4-201ENST00000263741 GATA1P15976 413 aaPredicted RBP12.76□□□□□ -0.37
SDF4-201ENST00000263741 PTTG1IPP53801 180 aa12.76□□□□□ -0.37
SDF4-201ENST00000263741 UFSP1Q6NVU6 142 aa12.76□□□□□ -0.37
SDF4-201ENST00000263741 A0A096LPF7 62 aa12.76□□□□□ -0.37
SDF4-201ENST00000263741 CRYGDP07320 174 aa12.76□□□□□ -0.37
SDF4-201ENST00000263741 TCTAP57738 103 aa12.76□□□□□ -0.37
SDF4-201ENST00000263741 SLC25A29Q8N8R3 303 aa12.76□□□□□ -0.37
SDF4-201ENST00000263741 C15orf53Q8NAA6 179 aa12.76□□□□□ -0.37
SDF4-201ENST00000263741 IFI27P40305 119 aaPredicted RBP12.75□□□□□ -0.37
SDF4-201ENST00000263741 C14orf178Q8N769 122 aaPredicted RBP12.75□□□□□ -0.37
SDF4-201ENST00000263741 VPS13DQ5THJ4 4388 aa12.75□□□□□ -0.37
SDF4-201ENST00000263741 LCE6AA0A183 80 aa12.74□□□□□ -0.37
SDF4-201ENST00000263741 HBDP02042 147 aa12.74□□□□□ -0.37
SDF4-201ENST00000263741 AMN1Q8IY45 258 aa12.74□□□□□ -0.37
SDF4-201ENST00000263741 Q9UF83 564 aa12.74□□□□□ -0.37
SDF4-201ENST00000263741 GYPEP15421 78 aa12.74□□□□□ -0.37
SDF4-201ENST00000263741 CKS2P33552 79 aa12.74□□□□□ -0.37
SDF4-201ENST00000263741 UBE2V1Q13404 147 aa12.74□□□□□ -0.37
SDF4-201ENST00000263741 TWIST1Q15672 202 aa12.74□□□□□ -0.37
SDF4-201ENST00000263741 LOC389332A0A1B0GUA5 103 aa12.73□□□□□ -0.37
SDF4-201ENST00000263741 MRPL51Q4U2R6 128 aaKnown RBP12.73□□□□□ -0.37
SDF4-201ENST00000263741 MPV17L2Q567V2 206 aa12.73□□□□□ -0.37
SDF4-201ENST00000263741 AP1S3Q96PC3 154 aa12.73□□□□□ -0.37
SDF4-201ENST00000263741 PPBPP02775 128 aa12.73□□□□□ -0.37
SDF4-201ENST00000263741 COX8AP10176 69 aa12.73□□□□□ -0.37
SDF4-201ENST00000263741 CACNG7P62955 275 aa12.73□□□□□ -0.37
SDF4-201ENST00000263741 ODF1Q14990 250 aa12.73□□□□□ -0.37
SDF4-201ENST00000263741 LGALS9CQ6DKI2 356 aa12.73□□□□□ -0.37
SDF4-201ENST00000263741 ZFP2Q6ZN57 461 aa12.73□□□□□ -0.37
SDF4-201ENST00000263741 H3BNG1 76 aa12.72□□□□□ -0.37
SDF4-201ENST00000263741 K7EQD1 137 aa12.72□□□□□ -0.37
SDF4-201ENST00000263741 RHODO00212 210 aa12.72□□□□□ -0.37
SDF4-201ENST00000263741 P0DMU3 169 aa12.72□□□□□ -0.37
SDF4-201ENST00000263741 FAM231AP0DMU4 169 aa12.72□□□□□ -0.37
SDF4-201ENST00000263741 FAM231CP0DMU5 169 aa12.72□□□□□ -0.37
SDF4-201ENST00000263741 ZNF56Q15929 161 aa12.72□□□□□ -0.37
SDF4-201ENST00000263741 BVES-AS1Q5T3Y7 98 aa12.72□□□□□ -0.37
SDF4-201ENST00000263741 ICOSQ9Y6W8 199 aa12.72□□□□□ -0.37
SDF4-201ENST00000263741 EVI2AP22794 236 aa12.71□□□□□ -0.37
SDF4-201ENST00000263741 CNFNQ9BYD5 112 aa12.71□□□□□ -0.37
SDF4-201ENST00000263741 HYDINQ4G0P3 5121 aa12.71□□□□□ -0.37
SDF4-201ENST00000263741 MGPP08493 103 aa12.71□□□□□ -0.38
SDF4-201ENST00000263741 MAP1LC3AQ9H492 121 aa12.71□□□□□ -0.38
SDF4-201ENST00000263741 KIF25-AS1Q9Y6Z4 181 aa12.71□□□□□ -0.38
SDF4-201ENST00000263741 TRBV6-4A0A1B0GX49 114 aa12.7□□□□□ -0.38
SDF4-201ENST00000263741 RHOHQ15669 191 aa12.7□□□□□ -0.38
SDF4-201ENST00000263741 UBE2DNLQ8IWF7 75 aa12.7□□□□□ -0.38
SDF4-201ENST00000263741 VAMP3Q15836 100 aa12.69□□□□□ -0.38
SDF4-201ENST00000263741 CCL25O15444 150 aa12.69□□□□□ -0.38
SDF4-201ENST00000263741 CIDEAO60543 219 aa12.69□□□□□ -0.38
SDF4-201ENST00000263741 LINC00315P59091 139 aa12.69□□□□□ -0.38
SDF4-201ENST00000263741 A0A096LNJ9 63 aa12.68□□□□□ -0.38
SDF4-201ENST00000263741 F5H697 171 aa12.68□□□□□ -0.38
SDF4-201ENST00000263741 SMIM17P0DL12 118 aa12.68□□□□□ -0.38
SDF4-201ENST00000263741 PRADC1Q9BSG0 188 aa12.68□□□□□ -0.38
SDF4-201ENST00000263741 NCR2O95944 276 aa12.68□□□□□ -0.38
SDF4-201ENST00000263741 NPYP01303 97 aa12.68□□□□□ -0.38
SDF4-201ENST00000263741 ESRGQ1W209 222 aa12.68□□□□□ -0.38
SDF4-201ENST00000263741 IFI27L1Q96BM0 104 aa12.68□□□□□ -0.38
SDF4-201ENST00000263741 LINC00588Q9Y4M8 146 aa12.68□□□□□ -0.38
SDF4-201ENST00000263741 KMT2AQ03164 3969 aa12.67□□□□□ -0.38
SDF4-201ENST00000263741 RYR2Q92736 4967 aa12.67□□□□□ -0.38
SDF4-201ENST00000263741 GAGE12JA6NER3 117 aa12.67□□□□□ -0.38
SDF4-201ENST00000263741 GAGE4Q13068 117 aa12.67□□□□□ -0.38
SDF4-201ENST00000263741 GAGE5Q13069 117 aa12.67□□□□□ -0.38
SDF4-201ENST00000263741 MRPL23Q16540 153 aaKnown RBP12.67□□□□□ -0.38
SDF4-201ENST00000263741 GAGE13Q4V321 117 aa12.67□□□□□ -0.38
SDF4-201ENST00000263741 NXT2Q9NPJ8 142 aaKnown RBP12.67□□□□□ -0.38
SDF4-201ENST00000263741 TP73-AS1Q9UF72 201 aa12.67□□□□□ -0.38
SDF4-201ENST00000263741 RYR3Q15413 4870 aa12.67□□□□□ -0.38
SDF4-201ENST00000263741 SEC11AP67812 179 aa12.66□□□□□ -0.38
SDF4-201ENST00000263741 SMIM15Q7Z3B0 74 aa12.66□□□□□ -0.38
SDF4-201ENST00000263741 TAX1BP3O14907 124 aa12.66□□□□□ -0.38
SDF4-201ENST00000263741 Q6ZVH6 145 aa12.65□□□□□ -0.38
SDF4-201ENST00000263741 DPH3P1Q9H4G8 78 aa12.65□□□□□ -0.38
SDF4-201ENST00000263741 SMKR1H3BMG3 65 aa12.65□□□□□ -0.39
SDF4-201ENST00000263741 CCL18P55774 89 aa12.65□□□□□ -0.39
SDF4-201ENST00000263741 SUMO4Q6EEV6 95 aa12.65□□□□□ -0.39
SDF4-201ENST00000263741 NEGR1Q7Z3B1 354 aa12.65□□□□□ -0.39
SDF4-201ENST00000263741 TRAV26-2A0A0B4J265 109 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms