RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 DPH3Q96FX2 82 aa5.74□□□□□ -1.49
LCN1-201ENST00000263598 IMMP2LQ96T52 175 aa5.74□□□□□ -1.49
LCN1-201ENST00000263598 DPH3P1Q9H4G8 78 aa5.74□□□□□ -1.49
LCN1-201ENST00000263598 NAT8Q9UHE5 227 aa5.74□□□□□ -1.49
LCN1-201ENST00000263598 PANO1I0J062 215 aa5.73□□□□□ -1.49
LCN1-201ENST00000263598 FHITP49789 147 aa5.73□□□□□ -1.49
LCN1-201ENST00000263598 UBE2G2P60604 165 aa5.73□□□□□ -1.49
LCN1-201ENST00000263598 SSTP61278 116 aa5.73□□□□□ -1.49
LCN1-201ENST00000263598 UBE2G1P62253 170 aa5.73□□□□□ -1.49
LCN1-201ENST00000263598 LINC01559Q495D7 138 aa5.73□□□□□ -1.49
LCN1-201ENST00000263598 NEXN-AS1Q8NBZ9 246 aa5.73□□□□□ -1.49
LCN1-201ENST00000263598 ISOC2Q96AB3 205 aa5.73□□□□□ -1.49
LCN1-201ENST00000263598 FMC1Q96HJ9 113 aa5.73□□□□□ -1.49
LCN1-201ENST00000263598 PRR34Q9NV39 138 aa5.73□□□□□ -1.49
LCN1-201ENST00000263598 TRAV9-1A0A075B6T8 112 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 CTXND1A0A1B0GTU2 59 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 LINC00587B1AMM8 73 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 HIST1H2BKO60814 126 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 HIST1H2BJP06899 126 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 HIST1H2BOP23527 126 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 HIST1H2BBP33778 126 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 HIST1H2BDP58876 126 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 HIST1H2BCP62807 126 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 CIRBPQ14011 172 aaKnown RBP5.72□□□□□ -1.49
LCN1-201ENST00000263598 HIST2H2BEQ16778 126 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 ZNF674Q2M3X9 581 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.72□□□□□ -1.49
LCN1-201ENST00000263598 CLPSL2Q6UWE3 100 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 MRPL52Q86TS9 123 aaKnown RBP5.72□□□□□ -1.49
LCN1-201ENST00000263598 LINC00269Q8N2A0 174 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 LINC00469Q8N7U9 141 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 HIST1H2BHQ93079 126 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 RNF185Q96GF1 192 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 HIST1H2BNQ99877 126 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 HIST1H2BMQ99879 126 aa5.72□□□□□ -1.49
LCN1-201ENST00000263598 TRBV25-1A0A075B6N4 114 aa5.71□□□□□ -1.5
LCN1-201ENST00000263598 IGHV3-64A0A075B6Q5 118 aa5.71□□□□□ -1.5
LCN1-201ENST00000263598 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.71□□□□□ -1.5
LCN1-201ENST00000263598 hDV102S1A0JD36 115 aa5.71□□□□□ -1.5
LCN1-201ENST00000263598 TSTD3H0UI37 97 aa5.71□□□□□ -1.5
LCN1-201ENST00000263598 PDE6DO43924 150 aa5.71□□□□□ -1.5
LCN1-201ENST00000263598 CNBPP62633 177 aaKnown RBP5.71□□□□□ -1.5
LCN1-201ENST00000263598 RBX1P62877 108 aa5.71□□□□□ -1.5
LCN1-201ENST00000263598 CCL20P78556 96 aa5.71□□□□□ -1.5
LCN1-201ENST00000263598 MEF2BQ02080 365 aaPredicted RBP5.71□□□□□ -1.5
LCN1-201ENST00000263598 TMEM241Q24JQ0 296 aa5.71□□□□□ -1.5
LCN1-201ENST00000263598 PRR27Q6MZM9 219 aa5.71□□□□□ -1.5
LCN1-201ENST00000263598 HIST3H2BBQ8N257 126 aa5.71□□□□□ -1.5
LCN1-201ENST00000263598 DERL1Q9BUN8 251 aa5.71□□□□□ -1.5
LCN1-201ENST00000263598 AP5S1Q9NUS5 200 aa5.71□□□□□ -1.5
LCN1-201ENST00000263598 TRBV6-1A0A0K0K1D8 114 aa5.7□□□□□ -1.5
LCN1-201ENST00000263598 MAP1LC3B2A6NCE7 125 aa5.7□□□□□ -1.5
LCN1-201ENST00000263598 ZNF727A8MUV8 499 aa5.7□□□□□ -1.5
LCN1-201ENST00000263598 F5H697 171 aa5.7□□□□□ -1.5
LCN1-201ENST00000263598 PHOX2AO14813 284 aa5.7□□□□□ -1.5
LCN1-201ENST00000263598 LTAP01374 205 aa5.7□□□□□ -1.5
LCN1-201ENST00000263598 AKR1C3P42330 323 aa5.7□□□□□ -1.5
LCN1-201ENST00000263598 GAGE6Q13070 117 aa5.7□□□□□ -1.5
LCN1-201ENST00000263598 ZNF726P1Q15940 193 aa5.7□□□□□ -1.5
LCN1-201ENST00000263598 PYY3Q5JQD4 70 aa5.7□□□□□ -1.5
LCN1-201ENST00000263598 KRTAP26-1Q6PEX3 210 aa5.7□□□□□ -1.5
LCN1-201ENST00000263598 NTM-AS1Q6ZSK4 140 aa5.7□□□□□ -1.5
LCN1-201ENST00000263598 C7orf33Q8WU49 177 aa5.7□□□□□ -1.5
LCN1-201ENST00000263598 PACRGQ96M98 296 aaPredicted RBP5.7□□□□□ -1.5
LCN1-201ENST00000263598 MAP1LC3BQ9GZQ8 125 aa5.7□□□□□ -1.5
LCN1-201ENST00000263598 GNG13Q9P2W3 67 aa5.7□□□□□ -1.5
LCN1-201ENST00000263598 PKHD1L1Q86WI1 4243 aa5.7□□□□□ -1.5
LCN1-201ENST00000263598 IGLV10-54A0A075B6I4 117 aa5.69□□□□□ -1.5
LCN1-201ENST00000263598 A0A087WYN8 130 aa5.69□□□□□ -1.5
LCN1-201ENST00000263598 TRAV8-4A0A0B4J246 113 aa5.69□□□□□ -1.5
LCN1-201ENST00000263598 P01737 135 aa5.69□□□□□ -1.5
LCN1-201ENST00000263598 CXCL1P09341 107 aa5.69□□□□□ -1.5
LCN1-201ENST00000263598 SMIM17P0DL12 118 aa5.69□□□□□ -1.5
LCN1-201ENST00000263598 NDUFA6P56556 154 aa5.69□□□□□ -1.5
LCN1-201ENST00000263598 REG3AQ06141 175 aa5.69□□□□□ -1.5
LCN1-201ENST00000263598 JOSD1Q15040 202 aaPredicted RBP5.69□□□□□ -1.5
LCN1-201ENST00000263598 COX19Q49B96 90 aa5.69□□□□□ -1.5
LCN1-201ENST00000263598 SPANXN1Q5VSR9 72 aa5.69□□□□□ -1.5
LCN1-201ENST00000263598 OR10AG1Q8NH19 301 aa5.69□□□□□ -1.5
LCN1-201ENST00000263598 SPACA4Q8TDM5 124 aa5.69□□□□□ -1.5
LCN1-201ENST00000263598 IGHV1-24A0A0C4DH33 117 aa5.68□□□□□ -1.5
LCN1-201ENST00000263598 IFITM10A6NMD0 228 aa5.68□□□□□ -1.5
LCN1-201ENST00000263598 TRGC2P03986 189 aa5.68□□□□□ -1.5
LCN1-201ENST00000263598 TRGC1P0CF51 173 aa5.68□□□□□ -1.5
LCN1-201ENST00000263598 GZMBP10144 247 aa5.68□□□□□ -1.5
LCN1-201ENST00000263598 IQCJQ1A5X6 159 aa5.68□□□□□ -1.5
LCN1-201ENST00000263598 CST9LP1Q5W188 147 aa5.68□□□□□ -1.5
LCN1-201ENST00000263598 SMIM7Q9BQ49 75 aa5.68□□□□□ -1.5
LCN1-201ENST00000263598 RNF213Q63HN8 5207 aa5.68□□□□□ -1.5
LCN1-201ENST00000263598 LRP2P98164 4655 aa5.68□□□□□ -1.5
LCN1-201ENST00000263598 SNAI2O43623 268 aa5.67□□□□□ -1.5
LCN1-201ENST00000263598 OR5AL1P0C617 328 aa5.67□□□□□ -1.5
LCN1-201ENST00000263598 CHTF8P0CG12 524 aa5.67□□□□□ -1.5
LCN1-201ENST00000263598 OR10D4PQ8NGN7 298 aa5.67□□□□□ -1.5
LCN1-201ENST00000263598 TMEM18Q96B42 140 aa5.67□□□□□ -1.5
LCN1-201ENST00000263598 LINC01600Q96MT4 127 aa5.67□□□□□ -1.5
LCN1-201ENST00000263598 PLAC8Q9NZF1 115 aa5.67□□□□□ -1.5
LCN1-201ENST00000263598 TGIF2-C20orf24A0A0A6YYL0 155 aa5.66□□□□□ -1.5
LCN1-201ENST00000263598 MUC21A0A0G2JKD1 596 aa5.66□□□□□ -1.5
LCN1-201ENST00000263598 MUC21A0A140T8X8 626 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms