RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 SNURFQ9Y675 71 aa9.09□□□□□ -0.95
SMG6-201ENST00000263073 ZMAT4Q9H898 229 aa9.09□□□□□ -0.95
SMG6-201ENST00000263073 IGKV2-24A0A0C4DH68 120 aa9.09□□□□□ -0.95
SMG6-201ENST00000263073 PIP4P1Q86T03 277 aa9.09□□□□□ -0.95
SMG6-201ENST00000263073 TMEM223A0PJW6 202 aa9.08□□□□□ -0.96
SMG6-201ENST00000263073 C2orf91Q6ZV80 131 aa9.08□□□□□ -0.96
SMG6-201ENST00000263073 TNCP24821 2201 aa9.08□□□□□ -0.96
SMG6-201ENST00000263073 PRM2P04554 102 aa9.08□□□□□ -0.96
SMG6-201ENST00000263073 C22orf34Q6ZV56 151 aa9.08□□□□□ -0.96
SMG6-201ENST00000263073 RNF185Q96GF1 192 aa9.08□□□□□ -0.96
SMG6-201ENST00000263073 MED14OSP0DP75 135 aa9.08□□□□□ -0.96
SMG6-201ENST00000263073 ZNF22P17026 224 aaPredicted RBP9.08□□□□□ -0.96
SMG6-201ENST00000263073 COX7BP24311 80 aa9.08□□□□□ -0.96
SMG6-201ENST00000263073 MAP6D1Q9H9H5 199 aa9.08□□□□□ -0.96
SMG6-201ENST00000263073 C3orf22Q8N5N4 141 aa9.07□□□□□ -0.96
SMG6-201ENST00000263073 SMAD5-AS1Q9Y6J3 95 aa9.07□□□□□ -0.96
SMG6-201ENST00000263073 ADAMTS9Q9P2N4 1935 aa9.07□□□□□ -0.96
SMG6-201ENST00000263073 IGFL2Q6UWQ7 119 aa9.07□□□□□ -0.96
SMG6-201ENST00000263073 DEFB113Q30KQ7 82 aa9.07□□□□□ -0.96
SMG6-201ENST00000263073 C9orf66Q5T8R8 295 aa9.07□□□□□ -0.96
SMG6-201ENST00000263073 ZFAND2AQ8N6M9 145 aa9.07□□□□□ -0.96
SMG6-201ENST00000263073 IGLV4-3A0A075B6K6 122 aa9.06□□□□□ -0.96
SMG6-201ENST00000263073 NCOA6Q14686 2063 aaPredicted RBP9.06□□□□□ -0.96
SMG6-201ENST00000263073 FAM236DA0A1B0GTK5 79 aa9.06□□□□□ -0.96
SMG6-201ENST00000263073 IGKV4-1P06312 121 aa9.06□□□□□ -0.96
SMG6-201ENST00000263073 FAM236CP0DP71 79 aa9.06□□□□□ -0.96
SMG6-201ENST00000263073 GPHB5Q86YW7 130 aa9.06□□□□□ -0.96
SMG6-201ENST00000263073 KIAA1549Q9HCM3 1950 aa9.06□□□□□ -0.96
SMG6-201ENST00000263073 BPY2O14599 106 aa9.06□□□□□ -0.96
SMG6-201ENST00000263073 CLUHP3Q96NS8 147 aa9.06□□□□□ -0.96
SMG6-201ENST00000263073 UQCRQO14949 82 aa9.06□□□□□ -0.96
SMG6-201ENST00000263073 CCL18P55774 89 aa9.06□□□□□ -0.96
SMG6-201ENST00000263073 PRR4Q16378 134 aa9.05□□□□□ -0.96
SMG6-201ENST00000263073 C10orf99Q6UWK7 81 aa9.05□□□□□ -0.96
SMG6-201ENST00000263073 K7EMT4 169 aa9.05□□□□□ -0.96
SMG6-201ENST00000263073 Q6ZS46 218 aa9.05□□□□□ -0.96
SMG6-201ENST00000263073 LINC00526Q96FQ7 95 aa9.05□□□□□ -0.96
SMG6-201ENST00000263073 WFDC10BQ8IUB3 73 aa9.05□□□□□ -0.96
SMG6-201ENST00000263073 LINC00308Q8TCZ7 52 aa9.05□□□□□ -0.96
SMG6-201ENST00000263073 XAGE1AQ9HD64 81 aa9.04□□□□□ -0.96
SMG6-201ENST00000263073 LTBP2Q14767 1821 aa9.04□□□□□ -0.96
SMG6-201ENST00000263073 XGP55808 180 aa9.04□□□□□ -0.96
SMG6-201ENST00000263073 HIGD2AQ9BW72 106 aa9.04□□□□□ -0.96
SMG6-201ENST00000263073 PCNX3Q9H6A9 2034 aa9.04□□□□□ -0.96
SMG6-201ENST00000263073 KIAA1549LQ6ZVL6 1849 aa9.04□□□□□ -0.96
SMG6-201ENST00000263073 EIF4EBP1Q13541 118 aaPredicted RBP9.04□□□□□ -0.96
SMG6-201ENST00000263073 C3orf84H3BNL1 204 aa9.04□□□□□ -0.96
SMG6-201ENST00000263073 C4orf3Q8WVX3 66 aa9.04□□□□□ -0.96
SMG6-201ENST00000263073 REG3AQ06141 175 aa9.03□□□□□ -0.96
SMG6-201ENST00000263073 Q8N976 141 aa9.02□□□□□ -0.97
SMG6-201ENST00000263073 IGLV2-11P01706 119 aa9.02□□□□□ -0.97
SMG6-201ENST00000263073 CHCHD10Q8WYQ3 142 aaPredicted RBP9.01□□□□□ -0.97
SMG6-201ENST00000263073 A6NDX4 124 aa9.01□□□□□ -0.97
SMG6-201ENST00000263073 TRBV10-1A0A0K0K1A3 114 aa9.01□□□□□ -0.97
SMG6-201ENST00000263073 CXCL5P42830 114 aa9.01□□□□□ -0.97
SMG6-201ENST00000263073 J3QKU1 62 aa9.01□□□□□ -0.97
SMG6-201ENST00000263073 C2orf16Q68DN1 1984 aa9.01□□□□□ -0.97
SMG6-201ENST00000263073 PRR9Q5T870 116 aa9.01□□□□□ -0.97
SMG6-201ENST00000263073 POM121L12Q8N7R1 296 aa9.01□□□□□ -0.97
SMG6-201ENST00000263073 NUP210LQ5VU65 1888 aa9□□□□□ -0.97
SMG6-201ENST00000263073 ALPK3Q96L96 1907 aa9□□□□□ -0.97
SMG6-201ENST00000263073 U3KQK5 164 aa9□□□□□ -0.97
SMG6-201ENST00000263073 UTRNP46939 3433 aa9□□□□□ -0.97
SMG6-201ENST00000263073 PRO0255Q9UI72 69 aa9□□□□□ -0.97
SMG6-201ENST00000263073 M0QY20 66 aa9□□□□□ -0.97
SMG6-201ENST00000263073 C1orf158Q8N1D5 194 aa9□□□□□ -0.97
SMG6-201ENST00000263073 C11orf21Q9P2W6 132 aa8.99□□□□□ -0.97
SMG6-201ENST00000263073 MED12LQ86YW9 2145 aa8.99□□□□□ -0.97
SMG6-201ENST00000263073 CFAP126Q5VTH2 177 aa8.99□□□□□ -0.97
SMG6-201ENST00000263073 Q6ZSV7 163 aa8.99□□□□□ -0.97
SMG6-201ENST00000263073 PCDH15Q96QU1 1955 aa8.98□□□□□ -0.97
SMG6-201ENST00000263073 PLXNB1O43157 2135 aa8.98□□□□□ -0.97
SMG6-201ENST00000263073 LOC100131303A0A0U1RQF7 123 aa8.98□□□□□ -0.97
SMG6-201ENST00000263073 ODF3BA8MYP8 253 aa8.98□□□□□ -0.97
SMG6-201ENST00000263073 LINC00694P0DN24 101 aa8.98□□□□□ -0.97
SMG6-201ENST00000263073 C6orf99Q4VX62 202 aa8.98□□□□□ -0.97
SMG6-201ENST00000263073 TRBV30A0A0K0K1B3 111 aa8.98□□□□□ -0.97
SMG6-201ENST00000263073 LRCOL1A6NCL2 159 aa8.98□□□□□ -0.97
SMG6-201ENST00000263073 NDUFA7O95182 113 aa8.98□□□□□ -0.97
SMG6-201ENST00000263073 LINC00310P59036 64 aa8.98□□□□□ -0.97
SMG6-201ENST00000263073 FAM222AQ5U5X8 452 aa8.98□□□□□ -0.97
SMG6-201ENST00000263073 IGKV2-28A0A075B6P5 120 aa8.98□□□□□ -0.97
SMG6-201ENST00000263073 IGKV2D-28P01615 120 aa8.98□□□□□ -0.97
SMG6-201ENST00000263073 NRACQ8N912 160 aa8.98□□□□□ -0.97
SMG6-201ENST00000263073 FAM19A5Q7Z5A7 132 aaPredicted RBP8.97□□□□□ -0.97
SMG6-201ENST00000263073 LINC00482Q8N8I6 264 aa8.97□□□□□ -0.97
SMG6-201ENST00000263073 C19orf84I3L1E1 186 aa8.97□□□□□ -0.97
SMG6-201ENST00000263073 ZFAND3Q9H8U3 227 aa8.97□□□□□ -0.97
SMG6-201ENST00000263073 NDUFC2-KCTD14E9PQ53 114 aa8.97□□□□□ -0.97
SMG6-201ENST00000263073 COL4A4P53420 1690 aaPredicted RBP8.97□□□□□ -0.97
SMG6-201ENST00000263073 TMEM131Q92545 1883 aa8.97□□□□□ -0.97
SMG6-201ENST00000263073 MYCNOSP40205 109 aa8.96□□□□□ -0.97
SMG6-201ENST00000263073 Q8NA96 180 aa8.96□□□□□ -0.97
SMG6-201ENST00000263073 DNAJC9-AS1A6NH13 148 aa8.96□□□□□ -0.97
SMG6-201ENST00000263073 FAM19A1Q7Z5A9 133 aa8.96□□□□□ -0.97
SMG6-201ENST00000263073 H3BQ85 93 aa8.96□□□□□ -0.98
SMG6-201ENST00000263073 H7C423 109 aa8.96□□□□□ -0.98
SMG6-201ENST00000263073 TRBV6-5A0A0K0K1A5 114 aa8.95□□□□□ -0.98
SMG6-201ENST00000263073 HRCT1Q6UXD1 115 aa8.95□□□□□ -0.98
SMG6-201ENST00000263073 WNK1Q9H4A3 2382 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms