RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 UBE2D4Q9Y2X8 147 aa6.19□□□□□ -1.42
PTPN3-201ENST00000262539 ORMDL1Q9P0S3 153 aa6.19□□□□□ -1.42
PTPN3-201ENST00000262539 KLK12Q9UKR0 248 aa6.19□□□□□ -1.42
PTPN3-201ENST00000262539 COX7B2Q8TF08 81 aa6.19□□□□□ -1.42
PTPN3-201ENST00000262539 LINC01548A6NM66 108 aa6.18□□□□□ -1.42
PTPN3-201ENST00000262539 SHISA2Q6UWI4 295 aa6.18□□□□□ -1.42
PTPN3-201ENST00000262539 SPATA25Q9BR10 227 aa6.18□□□□□ -1.42
PTPN3-201ENST00000262539 A8MTW9 85 aa6.18□□□□□ -1.42
PTPN3-201ENST00000262539 IGLC3P0DOY3 106 aa6.18□□□□□ -1.42
PTPN3-201ENST00000262539 DAZ2Q13117 558 aaKnown RBP6.18□□□□□ -1.42
PTPN3-201ENST00000262539 DAZ4Q86SG3 579 aaKnown RBP6.18□□□□□ -1.42
PTPN3-201ENST00000262539 TMEM61Q8N0U2 210 aa6.18□□□□□ -1.42
PTPN3-201ENST00000262539 Q9H8V8 135 aa6.18□□□□□ -1.42
PTPN3-201ENST00000262539 DAZ3Q9NR90 486 aaKnown RBP6.18□□□□□ -1.42
PTPN3-201ENST00000262539 IGLL1P15814 213 aa6.18□□□□□ -1.42
PTPN3-201ENST00000262539 WFDC9Q8NEX5 89 aa6.18□□□□□ -1.42
PTPN3-201ENST00000262539 FGF6P10767 208 aa6.18□□□□□ -1.42
PTPN3-201ENST00000262539 DEFB114Q30KQ6 69 aa6.18□□□□□ -1.42
PTPN3-201ENST00000262539 SPANXA1Q9NS26 97 aa6.18□□□□□ -1.42
PTPN3-201ENST00000262539 F8VRH5 84 aa6.17□□□□□ -1.42
PTPN3-201ENST00000262539 IGLV2-18A0A075B6J9 118 aa6.17□□□□□ -1.42
PTPN3-201ENST00000262539 NPYP01303 97 aa6.17□□□□□ -1.42
PTPN3-201ENST00000262539 A0A087WZ39 114 aa6.17□□□□□ -1.42
PTPN3-201ENST00000262539 RS1O15537 224 aa6.17□□□□□ -1.42
PTPN3-201ENST00000262539 CRYGDP07320 174 aa6.17□□□□□ -1.42
PTPN3-201ENST00000262539 CASC2Q6XLA1 102 aa6.17□□□□□ -1.42
PTPN3-201ENST00000262539 PRAC2D3DTV9 90 aa6.16□□□□□ -1.42
PTPN3-201ENST00000262539 PCP4P48539 62 aa6.16□□□□□ -1.42
PTPN3-201ENST00000262539 DCANP1Q8TF63 244 aa6.16□□□□□ -1.42
PTPN3-201ENST00000262539 POLQO75417 2590 aa6.16□□□□□ -1.42
PTPN3-201ENST00000262539 HIGD2BQ4VC39 106 aa6.16□□□□□ -1.42
PTPN3-201ENST00000262539 CARD19Q96LW7 228 aa6.16□□□□□ -1.42
PTPN3-201ENST00000262539 BVES-AS1Q5T3Y7 98 aa6.16□□□□□ -1.42
PTPN3-201ENST00000262539 VSIG2Q96IQ7 327 aa6.16□□□□□ -1.42
PTPN3-201ENST00000262539 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.16□□□□□ -1.42
PTPN3-201ENST00000262539 FHL3Q13643 280 aa6.16□□□□□ -1.42
PTPN3-201ENST00000262539 LY6G6DO95868 133 aa6.16□□□□□ -1.42
PTPN3-201ENST00000262539 IGKV4-1P06312 121 aa6.16□□□□□ -1.42
PTPN3-201ENST00000262539 HIGD1BQ9P298 99 aa6.16□□□□□ -1.42
PTPN3-201ENST00000262539 NOTCH3Q9UM47 2321 aa6.15□□□□□ -1.42
PTPN3-201ENST00000262539 HERV-K104P63124 156 aa6.15□□□□□ -1.42
PTPN3-201ENST00000262539 LINC00322Q6ZN03 302 aaPredicted RBP6.15□□□□□ -1.42
PTPN3-201ENST00000262539 TMEM258P61165 79 aa6.15□□□□□ -1.42
PTPN3-201ENST00000262539 ZNF664Q8N3J9 261 aa6.15□□□□□ -1.42
PTPN3-201ENST00000262539 KIR2DL5BQ8NHK3 375 aa6.15□□□□□ -1.42
PTPN3-201ENST00000262539 DEFB131BA0A096LNP1 70 aa6.15□□□□□ -1.42
PTPN3-201ENST00000262539 LINC01006Q8NI28 216 aa6.15□□□□□ -1.43
PTPN3-201ENST00000262539 C9orf85Q96MD7 179 aa6.15□□□□□ -1.43
PTPN3-201ENST00000262539 GAGE12HA6NDE8 117 aa6.14□□□□□ -1.43
PTPN3-201ENST00000262539 SPAG11BQ08648 103 aa6.14□□□□□ -1.43
PTPN3-201ENST00000262539 DOPEY2Q9Y3R5 2298 aa6.14□□□□□ -1.43
PTPN3-201ENST00000262539 J3QQQ9 107 aa6.14□□□□□ -1.43
PTPN3-201ENST00000262539 MP68P56378 58 aa6.14□□□□□ -1.43
PTPN3-201ENST00000262539 ANKRD39Q53RE8 183 aa6.14□□□□□ -1.43
PTPN3-201ENST00000262539 ZNF80P51504 273 aaPredicted RBP6.14□□□□□ -1.43
PTPN3-201ENST00000262539 UBE2D3P61077 147 aa6.14□□□□□ -1.43
PTPN3-201ENST00000262539 A0A096LNI7 61 aa6.13□□□□□ -1.43
PTPN3-201ENST00000262539 COX8AP10176 69 aa6.13□□□□□ -1.43
PTPN3-201ENST00000262539 TRBV27A0A0K0K1C4 114 aa6.13□□□□□ -1.43
PTPN3-201ENST00000262539 WNK1Q9H4A3 2382 aa6.13□□□□□ -1.43
PTPN3-201ENST00000262539 TRAV26-1A0A087WT03 109 aa6.13□□□□□ -1.43
PTPN3-201ENST00000262539 MAP6D1Q9H9H5 199 aa6.13□□□□□ -1.43
PTPN3-201ENST00000262539 ABCA2Q9BZC7 2435 aa6.13□□□□□ -1.43
PTPN3-201ENST00000262539 CRIP1P50238 77 aa6.13□□□□□ -1.43
PTPN3-201ENST00000262539 PYGO1Q9Y3Y4 419 aa6.13□□□□□ -1.43
PTPN3-201ENST00000262539 A0A1B0GX51 115 aa6.13□□□□□ -1.43
PTPN3-201ENST00000262539 CCL25O15444 150 aa6.13□□□□□ -1.43
PTPN3-201ENST00000262539 FAM19A1Q7Z5A9 133 aa6.13□□□□□ -1.43
PTPN3-201ENST00000262539 HIGD2AQ9BW72 106 aa6.13□□□□□ -1.43
PTPN3-201ENST00000262539 NREPQ16612 68 aa6.12□□□□□ -1.43
PTPN3-201ENST00000262539 Q6ZVH6 145 aa6.12□□□□□ -1.43
PTPN3-201ENST00000262539 TMEM263Q8WUH6 116 aaKnown RBP6.12□□□□□ -1.43
PTPN3-201ENST00000262539 FAM19A4Q96LR4 140 aa6.12□□□□□ -1.43
PTPN3-201ENST00000262539 JMJD1CQ15652 2540 aa6.12□□□□□ -1.43
PTPN3-201ENST00000262539 H7C423 109 aa6.12□□□□□ -1.43
PTPN3-201ENST00000262539 TRBV12-3P01733 135 aa6.12□□□□□ -1.43
PTPN3-201ENST00000262539 BAALC-AS2P0C853 105 aa6.12□□□□□ -1.43
PTPN3-201ENST00000262539 IGLV1-51P01701 117 aa6.11□□□□□ -1.43
PTPN3-201ENST00000262539 C20orf203Q8NBC4 194 aa6.11□□□□□ -1.43
PTPN3-201ENST00000262539 MRPL35Q9NZE8 188 aaKnown RBP6.11□□□□□ -1.43
PTPN3-201ENST00000262539 DIRC1Q969H9 104 aa6.11□□□□□ -1.43
PTPN3-201ENST00000262539 GTSF1LQ9H1H1 148 aa6.11□□□□□ -1.43
PTPN3-201ENST00000262539 TANC2Q9HCD6 1990 aa6.11□□□□□ -1.43
PTPN3-201ENST00000262539 PRRC2AP48634 2157 aaKnown RBP6.11□□□□□ -1.43
PTPN3-201ENST00000262539 KRTAP10-9P60411 292 aa6.11□□□□□ -1.43
PTPN3-201ENST00000262539 RBM3P98179 157 aaKnown RBP6.11□□□□□ -1.43
PTPN3-201ENST00000262539 SND1-IT1Q9HBX3 110 aa6.11□□□□□ -1.43
PTPN3-201ENST00000262539 TRBV7-3A0A075B6L6 115 aa6.11□□□□□ -1.43
PTPN3-201ENST00000262539 POM121L12Q8N7R1 296 aa6.11□□□□□ -1.43
PTPN3-201ENST00000262539 RPL39LQ96EH5 51 aaKnown RBP6.11□□□□□ -1.43
PTPN3-201ENST00000262539 PRO1854Q9UHT4 67 aa6.11□□□□□ -1.43
PTPN3-201ENST00000262539 UNC79Q9P2D8 2635 aa6.11□□□□□ -1.43
PTPN3-201ENST00000262539 FLNBO75369 2602 aaKnown RBP6.11□□□□□ -1.43
PTPN3-201ENST00000262539 POLR2KP53803 58 aaKnown RBP6.11□□□□□ -1.43
PTPN3-201ENST00000262539 PROK1P58294 105 aa6.11□□□□□ -1.43
PTPN3-201ENST00000262539 TRBV20-1A0A075B6N2 111 aa6.1□□□□□ -1.43
PTPN3-201ENST00000262539 PLXNB1O43157 2135 aa6.1□□□□□ -1.43
PTPN3-201ENST00000262539 PRRC2CQ9Y520 2896 aaKnown RBP6.1□□□□□ -1.43
PTPN3-201ENST00000262539 LINC01546A6NGU7 62 aa6.1□□□□□ -1.43
PTPN3-201ENST00000262539 CEND1Q8N111 149 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms