RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 K7EMT4 169 aa13.2□□□□□ -0.3
TRAF4-201ENST00000262395 UCNP55089 124 aa13.2□□□□□ -0.3
TRAF4-201ENST00000262395 TIMM21Q9BVV7 248 aa13.2□□□□□ -0.3
TRAF4-201ENST00000262395 CENPEQ02224 2701 aa13.2□□□□□ -0.3
TRAF4-201ENST00000262395 TRIAP1O43715 76 aa13.2□□□□□ -0.3
TRAF4-201ENST00000262395 NDUFV3P56181 108 aaKnown RBP13.2□□□□□ -0.3
TRAF4-201ENST00000262395 GAGE12JA6NER3 117 aa13.19□□□□□ -0.3
TRAF4-201ENST00000262395 M0R2P5 195 aa13.19□□□□□ -0.3
TRAF4-201ENST00000262395 GAGE7O76087 117 aa13.19□□□□□ -0.3
TRAF4-201ENST00000262395 GAGE12FP0CL80 117 aa13.19□□□□□ -0.3
TRAF4-201ENST00000262395 GAGE12GP0CL81 117 aa13.19□□□□□ -0.3
TRAF4-201ENST00000262395 GAGE12IP0CL82 117 aa13.19□□□□□ -0.3
TRAF4-201ENST00000262395 CFHR3Q02985 330 aa13.19□□□□□ -0.3
TRAF4-201ENST00000262395 GAGE4Q13068 117 aa13.19□□□□□ -0.3
TRAF4-201ENST00000262395 ATP5J2P56134 94 aa13.19□□□□□ -0.3
TRAF4-201ENST00000262395 LINC01620Q4KN68 170 aa13.19□□□□□ -0.3
TRAF4-201ENST00000262395 DAND5Q8N907 189 aa13.19□□□□□ -0.3
TRAF4-201ENST00000262395 CCL19Q99731 98 aa13.19□□□□□ -0.3
TRAF4-201ENST00000262395 CITED1Q99966 193 aa13.19□□□□□ -0.3
TRAF4-201ENST00000262395 K7EQG2 157 aa13.19□□□□□ -0.3
TRAF4-201ENST00000262395 C10orf105Q8TEF2 133 aa13.19□□□□□ -0.3
TRAF4-201ENST00000262395 FAM104AQ969W3 186 aa13.19□□□□□ -0.3
TRAF4-201ENST00000262395 A0A0B4J2C4 111 aa13.18□□□□□ -0.3
TRAF4-201ENST00000262395 BRI3O95415 125 aa13.18□□□□□ -0.3
TRAF4-201ENST00000262395 NOTCH3Q9UM47 2321 aa13.18□□□□□ -0.3
TRAF4-201ENST00000262395 IGHV3-38A0A0C4DH36 116 aa13.18□□□□□ -0.3
TRAF4-201ENST00000262395 PSMB8P28062 276 aa13.18□□□□□ -0.3
TRAF4-201ENST00000262395 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-201ENST00000262395 IGKV2-29A2NJV5 120 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-201ENST00000262395 MSMBP08118 114 aa13.17□□□□□ -0.3
TRAF4-201ENST00000262395 NRGNQ92686 78 aa13.17□□□□□ -0.3
TRAF4-201ENST00000262395 ATXN8Q156A1 80 aa13.16□□□□□ -0.3
TRAF4-201ENST00000262395 HIST2H2BDQ6DRA6 164 aa13.16□□□□□ -0.3
TRAF4-201ENST00000262395 Q6ZSN1 163 aa13.16□□□□□ -0.3
TRAF4-201ENST00000262395 MAPK1IP1LQ8NDC0 245 aa13.16□□□□□ -0.3
TRAF4-201ENST00000262395 CLEC2BQ92478 149 aa13.16□□□□□ -0.3
TRAF4-201ENST00000262395 LITAFQ99732 161 aa13.16□□□□□ -0.3
TRAF4-201ENST00000262395 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.16□□□□□ -0.3
TRAF4-201ENST00000262395 NDUFA12Q9UI09 145 aa13.16□□□□□ -0.3
TRAF4-201ENST00000262395 IFITM1P13164 125 aa13.15□□□□□ -0.3
TRAF4-201ENST00000262395 DEFB112Q30KQ8 113 aa13.15□□□□□ -0.3
TRAF4-201ENST00000262395 TNFRSF18Q9Y5U5 241 aa13.15□□□□□ -0.3
TRAF4-201ENST00000262395 MXRA5Q9NR99 2828 aa13.14□□□□□ -0.31
TRAF4-201ENST00000262395 A0A0U1RRA0 63 aa13.14□□□□□ -0.31
TRAF4-201ENST00000262395 DEFB136Q30KP8 78 aa13.14□□□□□ -0.31
TRAF4-201ENST00000262395 CFAP46Q8IYW2 2715 aa13.14□□□□□ -0.31
TRAF4-201ENST00000262395 DUX3Q96PT4 197 aa13.13□□□□□ -0.31
TRAF4-201ENST00000262395 C2CD3Q4AC94 2353 aa13.13□□□□□ -0.31
TRAF4-201ENST00000262395 C3orf56Q8N813 242 aa13.13□□□□□ -0.31
TRAF4-201ENST00000262395 DEFB131AP59861 70 aa13.12□□□□□ -0.31
TRAF4-201ENST00000262395 ICOSQ9Y6W8 199 aa13.12□□□□□ -0.31
TRAF4-201ENST00000262395 USP9XQ93008 2570 aaPredicted RBP13.12□□□□□ -0.31
TRAF4-201ENST00000262395 C2orf82Q6UX34 121 aa13.12□□□□□ -0.31
TRAF4-201ENST00000262395 ODF3Q96PU9 254 aa13.12□□□□□ -0.31
TRAF4-201ENST00000262395 TRGV11A0A075B6L2 103 aa13.11□□□□□ -0.31
TRAF4-201ENST00000262395 MRPS36P82909 103 aaKnown RBP13.11□□□□□ -0.31
TRAF4-201ENST00000262395 IGHV1-58A0A0C4DH39 117 aa13.11□□□□□ -0.31
TRAF4-201ENST00000262395 HOXD3P31249 432 aaPredicted RBP13.11□□□□□ -0.31
TRAF4-201ENST00000262395 C18orf65Q6ZTR6 163 aa13.11□□□□□ -0.31
TRAF4-201ENST00000262395 ZNF625Q96I27 306 aaPredicted RBP13.11□□□□□ -0.31
TRAF4-201ENST00000262395 MYO9AB2RTY4 2548 aa13.11□□□□□ -0.31
TRAF4-201ENST00000262395 TRAV8-4A0A0B4J246 113 aa13.1□□□□□ -0.31
TRAF4-201ENST00000262395 C15orf53Q8NAA6 179 aa13.1□□□□□ -0.31
TRAF4-201ENST00000262395 TRBV30A0A0K0K1B3 111 aa13.09□□□□□ -0.31
TRAF4-201ENST00000262395 TRBV10-2A0A0K0K1G8 114 aa13.09□□□□□ -0.31
TRAF4-201ENST00000262395 LINC00467Q9BRT7 94 aa13.09□□□□□ -0.31
TRAF4-201ENST00000262395 H7C423 109 aa13.09□□□□□ -0.31
TRAF4-201ENST00000262395 H3BMM0 161 aa13.09□□□□□ -0.31
TRAF4-201ENST00000262395 UBE2WQ96B02 151 aa13.09□□□□□ -0.31
TRAF4-201ENST00000262395 VSIG2Q96IQ7 327 aa13.09□□□□□ -0.31
TRAF4-201ENST00000262395 FAM110AQ9BQ89 295 aa13.08□□□□□ -0.32
TRAF4-201ENST00000262395 SLURP1P55000 103 aa13.08□□□□□ -0.32
TRAF4-201ENST00000262395 CHCHD7Q9BUK0 85 aa13.08□□□□□ -0.32
TRAF4-201ENST00000262395 RBMY1BA6NDE4 496 aaKnown RBP13.07□□□□□ -0.32
TRAF4-201ENST00000262395 RBMY1EA6NEQ0 496 aaKnown RBP13.07□□□□□ -0.32
TRAF4-201ENST00000262395 RBMY1DP0C7P1 496 aaKnown RBP13.07□□□□□ -0.32
TRAF4-201ENST00000262395 CDKN2A-AS1Q9UH64 79 aa13.07□□□□□ -0.32
TRAF4-201ENST00000262395 MIAQ16674 131 aa13.07□□□□□ -0.32
TRAF4-201ENST00000262395 UBE2D4Q9Y2X8 147 aa13.07□□□□□ -0.32
TRAF4-201ENST00000262395 PYGO1Q9Y3Y4 419 aa13.07□□□□□ -0.32
TRAF4-201ENST00000262395 RPL13AP40429 203 aaKnown RBP13.06□□□□□ -0.32
TRAF4-201ENST00000262395 MEIG1Q5JSS6 88 aa13.06□□□□□ -0.32
TRAF4-201ENST00000262395 WNK1Q9H4A3 2382 aa13.06□□□□□ -0.32
TRAF4-201ENST00000262395 PKD1L2Q7Z442 2459 aa13.06□□□□□ -0.32
TRAF4-201ENST00000262395 MYO18BQ8IUG5 2567 aa13.05□□□□□ -0.32
TRAF4-201ENST00000262395 B4DSR2 109 aa13.05□□□□□ -0.32
TRAF4-201ENST00000262395 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.05□□□□□ -0.32
TRAF4-201ENST00000262395 NDUFA7O95182 113 aa13.04□□□□□ -0.32
TRAF4-201ENST00000262395 ANKRD17O75179 2603 aaKnown RBP13.04□□□□□ -0.32
TRAF4-201ENST00000262395 TINCRA0A1B0GVN0 87 aa13.03□□□□□ -0.32
TRAF4-201ENST00000262395 COX6CP09669 75 aa13.03□□□□□ -0.32
TRAF4-201ENST00000262395 COX6A2Q02221 97 aa13.03□□□□□ -0.32
TRAF4-201ENST00000262395 TMEM61Q8N0U2 210 aa13.03□□□□□ -0.32
TRAF4-201ENST00000262395 LINC01587Q99440 93 aa13.03□□□□□ -0.32
TRAF4-201ENST00000262395 SPANXDQ9BXN6 97 aa13.03□□□□□ -0.32
TRAF4-201ENST00000262395 SPANXCQ9NY87 97 aa13.03□□□□□ -0.32
TRAF4-201ENST00000262395 FBN2P35556 2912 aa13.03□□□□□ -0.32
TRAF4-201ENST00000262395 IGHV3OR16-12A0A075B7B8 117 aa13.02□□□□□ -0.32
TRAF4-201ENST00000262395 M0QXV9 152 aa13.02□□□□□ -0.32
TRAF4-201ENST00000262395 TLN2Q9Y4G6 2542 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms