RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 RNASE8Q8TDE3 154 aaKnown RBP9.4□□□□□ -0.9
SGCA-201ENST00000262018 IGHV3OR16-12A0A075B7B8 117 aa9.39□□□□□ -0.91
SGCA-201ENST00000262018 A0A087WWL8 130 aa9.39□□□□□ -0.91
SGCA-201ENST00000262018 A8MWV9 139 aa9.39□□□□□ -0.91
SGCA-201ENST00000262018 SUMO4Q6EEV6 95 aa9.39□□□□□ -0.91
SGCA-201ENST00000262018 TMEM263Q8WUH6 116 aaKnown RBP9.39□□□□□ -0.91
SGCA-201ENST00000262018 PAM16Q9Y3D7 125 aa9.39□□□□□ -0.91
SGCA-201ENST00000262018 LRP1BQ9NZR2 4599 aa9.39□□□□□ -0.91
SGCA-201ENST00000262018 TRAV10A0A0B4J240 114 aa9.39□□□□□ -0.91
SGCA-201ENST00000262018 M0R143 59 aa9.39□□□□□ -0.91
SGCA-201ENST00000262018 TCAPO15273 167 aa9.39□□□□□ -0.91
SGCA-201ENST00000262018 ATP5LO75964 103 aa9.39□□□□□ -0.91
SGCA-201ENST00000262018 FCER1GP30273 86 aa9.39□□□□□ -0.91
SGCA-201ENST00000262018 ORMDL2Q53FV1 153 aa9.39□□□□□ -0.91
SGCA-201ENST00000262018 PMCHL2Q9BQD1 86 aa9.39□□□□□ -0.91
SGCA-201ENST00000262018 C2orf88Q9BSF0 95 aa9.39□□□□□ -0.91
SGCA-201ENST00000262018 APOBP04114 4563 aaKnown RBP9.38□□□□□ -0.91
SGCA-201ENST00000262018 SUMO2P61956 95 aaKnown RBP9.38□□□□□ -0.91
SGCA-201ENST00000262018 FAM74A4Q5TZK3 123 aa9.38□□□□□ -0.91
SGCA-201ENST00000262018 UFSP1Q6NVU6 142 aa9.38□□□□□ -0.91
SGCA-201ENST00000262018 Q6ZTC4 211 aa9.38□□□□□ -0.91
SGCA-201ENST00000262018 RPL39LQ96EH5 51 aaKnown RBP9.38□□□□□ -0.91
SGCA-201ENST00000262018 SMIM2Q9BVW6 85 aa9.38□□□□□ -0.91
SGCA-201ENST00000262018 A0A096LNJ9 63 aa9.37□□□□□ -0.91
SGCA-201ENST00000262018 IGLC3P0DOY3 106 aa9.37□□□□□ -0.91
SGCA-201ENST00000262018 Q6ZR54 194 aa9.37□□□□□ -0.91
SGCA-201ENST00000262018 C16orf74Q96GX8 76 aa9.37□□□□□ -0.91
SGCA-201ENST00000262018 MRPS16Q9Y3D3 137 aaKnown RBP9.37□□□□□ -0.91
SGCA-201ENST00000262018 TRBV6-5A0A0K0K1A5 114 aa9.36□□□□□ -0.91
SGCA-201ENST00000262018 F5H697 171 aa9.36□□□□□ -0.91
SGCA-201ENST00000262018 M0QY20 66 aa9.36□□□□□ -0.91
SGCA-201ENST00000262018 RS1O15537 224 aa9.36□□□□□ -0.91
SGCA-201ENST00000262018 MIFP14174 115 aa9.36□□□□□ -0.91
SGCA-201ENST00000262018 DAZ2Q13117 558 aaKnown RBP9.36□□□□□ -0.91
SGCA-201ENST00000262018 LAGE3Q14657 143 aa9.36□□□□□ -0.91
SGCA-201ENST00000262018 ZNF56Q15929 161 aa9.36□□□□□ -0.91
SGCA-201ENST00000262018 IFI27L1Q96BM0 104 aa9.36□□□□□ -0.91
SGCA-201ENST00000262018 MRPL16Q9NX20 251 aaKnown RBP9.36□□□□□ -0.91
SGCA-201ENST00000262018 X6R8D5 127 aa9.36□□□□□ -0.91
SGCA-201ENST00000262018 UBR4Q5T4S7 5183 aa9.36□□□□□ -0.91
SGCA-201ENST00000262018 NACAE9PAV3 2078 aa9.36□□□□□ -0.91
SGCA-201ENST00000262018 PLAC8L1A1L4L8 177 aa9.35□□□□□ -0.91
SGCA-201ENST00000262018 SMIM9A6NGZ8 99 aa9.35□□□□□ -0.91
SGCA-201ENST00000262018 RHODO00212 210 aa9.35□□□□□ -0.91
SGCA-201ENST00000262018 RRN3P1Q2M238 152 aa9.35□□□□□ -0.91
SGCA-201ENST00000262018 C1orf134Q5TEV5 83 aa9.35□□□□□ -0.91
SGCA-201ENST00000262018 CFAP126Q5VTH2 177 aa9.35□□□□□ -0.91
SGCA-201ENST00000262018 LINC00173Q6ZV60 143 aa9.35□□□□□ -0.91
SGCA-201ENST00000262018 POLR2KP53803 58 aaKnown RBP9.34□□□□□ -0.91
SGCA-201ENST00000262018 UBE2DNLQ8IWF7 75 aa9.34□□□□□ -0.91
SGCA-201ENST00000262018 Q8NAQ8 132 aa9.34□□□□□ -0.91
SGCA-201ENST00000262018 INAFM2P0DMQ5 153 aa9.33□□□□□ -0.92
SGCA-201ENST00000262018 HNRNPA3P51991 378 aaKnown RBP9.33□□□□□ -0.92
SGCA-201ENST00000262018 TNP2Q05952 138 aa9.33□□□□□ -0.92
SGCA-201ENST00000262018 ZFP2Q6ZN57 461 aa9.33□□□□□ -0.92
SGCA-201ENST00000262018 DEFB131BA0A096LNP1 70 aa9.32□□□□□ -0.92
SGCA-201ENST00000262018 TRGV1A0A0A0MS02 117 aa9.32□□□□□ -0.92
SGCA-201ENST00000262018 IGHV4-28A0A0C4DH34 117 aa9.32□□□□□ -0.92
SGCA-201ENST00000262018 H7C1H1 209 aa9.32□□□□□ -0.92
SGCA-201ENST00000262018 IGHV3-73A0A0B4J1V6 119 aa9.31□□□□□ -0.92
SGCA-201ENST00000262018 EPM2AB3EWF7 344 aa9.31□□□□□ -0.92
SGCA-201ENST00000262018 VCYO14598 125 aa9.31□□□□□ -0.92
SGCA-201ENST00000262018 Q6ZN92 141 aa9.31□□□□□ -0.92
SGCA-201ENST00000262018 Q6ZTI0 123 aa9.31□□□□□ -0.92
SGCA-201ENST00000262018 NOP10Q9NPE3 64 aaKnown RBP9.31□□□□□ -0.92
SGCA-201ENST00000262018 TRAV4A0A0B4J268 109 aa9.31□□□□□ -0.92
SGCA-201ENST00000262018 TRBV27A0A0K0K1C4 114 aa9.31□□□□□ -0.92
SGCA-201ENST00000262018 SDHAF1A6NFY7 115 aa9.31□□□□□ -0.92
SGCA-201ENST00000262018 IGHV3-53P01767 116 aa9.31□□□□□ -0.92
SGCA-201ENST00000262018 SLC25A34Q6PIV7 304 aa9.31□□□□□ -0.92
SGCA-201ENST00000262018 OR4C5Q8NGB2 326 aa9.31□□□□□ -0.92
SGCA-201ENST00000262018 DNAH5Q8TE73 4624 aa9.3□□□□□ -0.92
SGCA-201ENST00000262018 TRAV12-1A0A0B4J245 112 aa9.3□□□□□ -0.92
SGCA-201ENST00000262018 Q6ZSN1 163 aa9.3□□□□□ -0.92
SGCA-201ENST00000262018 KIR2DL4Q99706 377 aa9.3□□□□□ -0.92
SGCA-201ENST00000262018 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.29□□□□□ -0.92
SGCA-201ENST00000262018 SIVA1O15304 175 aa9.29□□□□□ -0.92
SGCA-201ENST00000262018 DLEU1O43261 78 aa9.29□□□□□ -0.92
SGCA-201ENST00000262018 CIDEAO60543 219 aa9.29□□□□□ -0.92
SGCA-201ENST00000262018 PLNP26678 52 aa9.29□□□□□ -0.92
SGCA-201ENST00000262018 DNAJC30Q96LL9 226 aa9.29□□□□□ -0.92
SGCA-201ENST00000262018 NUDT3O95989 172 aa9.28□□□□□ -0.92
SGCA-201ENST00000262018 COL5A1-AS1Q5SY13 56 aa9.28□□□□□ -0.92
SGCA-201ENST00000262018 NEGR1Q7Z3B1 354 aa9.28□□□□□ -0.92
SGCA-201ENST00000262018 LINC00612Q8N6U2 182 aa9.28□□□□□ -0.92
SGCA-201ENST00000262018 TOMM6Q96B49 74 aa9.28□□□□□ -0.92
SGCA-201ENST00000262018 ZNF479Q96JC4 524 aa9.28□□□□□ -0.92
SGCA-201ENST00000262018 SNHG12Q9BXW3 62 aa9.28□□□□□ -0.92
SGCA-201ENST00000262018 TEX48A0A1B0GUV7 120 aa9.27□□□□□ -0.93
SGCA-201ENST00000262018 COX8AP10176 69 aa9.27□□□□□ -0.93
SGCA-201ENST00000262018 C12orf74Q32Q52 190 aa9.27□□□□□ -0.93
SGCA-201ENST00000262018 PAPPA-AS1Q5QFB9 102 aa9.27□□□□□ -0.93
SGCA-201ENST00000262018 NEXN-AS1Q8NBZ9 246 aa9.27□□□□□ -0.93
SGCA-201ENST00000262018 CELA1Q9UNI1 258 aa9.27□□□□□ -0.93
SGCA-201ENST00000262018 GAGE12BA1L429 117 aa9.26□□□□□ -0.93
SGCA-201ENST00000262018 I3L3M4 83 aa9.26□□□□□ -0.93
SGCA-201ENST00000262018 GAGE7O76087 117 aa9.26□□□□□ -0.93
SGCA-201ENST00000262018 PRSS1P07477 247 aa9.26□□□□□ -0.93
SGCA-201ENST00000262018 NPSP0C0P6 89 aa9.26□□□□□ -0.93
SGCA-201ENST00000262018 GAGE12FP0CL80 117 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms