RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 TRAV8-4A0A0B4J246 113 aa16.68■□□□□ 0.26
MCF2L-201ENST00000261963 H7C2G1 150 aa16.68■□□□□ 0.26
MCF2L-201ENST00000261963 ATXN8Q156A1 80 aa16.68■□□□□ 0.26
MCF2L-201ENST00000261963 UBE2E2Q96LR5 201 aa16.68■□□□□ 0.26
MCF2L-201ENST00000261963 C9orf85Q96MD7 179 aa16.68■□□□□ 0.26
MCF2L-201ENST00000261963 HERV-K104P63124 156 aa16.67■□□□□ 0.26
MCF2L-201ENST00000261963 SHISA2Q6UWI4 295 aa16.67■□□□□ 0.26
MCF2L-201ENST00000261963 MDFICQ9P1T7 246 aa16.67■□□□□ 0.26
MCF2L-201ENST00000261963 CR1P17927 2039 aa16.67■□□□□ 0.26
MCF2L-201ENST00000261963 RPL32P62910 135 aaKnown RBP16.67■□□□□ 0.26
MCF2L-201ENST00000261963 EPG5Q9HCE0 2579 aa16.67■□□□□ 0.26
MCF2L-201ENST00000261963 TEX15Q9BXT5 2789 aa16.66■□□□□ 0.26
MCF2L-201ENST00000261963 A0A0B4J2C4 111 aa16.66■□□□□ 0.26
MCF2L-201ENST00000261963 POLR2KP53803 58 aaKnown RBP16.66■□□□□ 0.26
MCF2L-201ENST00000261963 LINC01620Q4KN68 170 aa16.66■□□□□ 0.26
MCF2L-201ENST00000261963 SMIM20Q8N5G0 67 aa16.66■□□□□ 0.26
MCF2L-201ENST00000261963 RNF152Q8N8N0 203 aa16.66■□□□□ 0.26
MCF2L-201ENST00000261963 EIF4EBP3O60516 100 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-201ENST00000261963 ZNRF2Q8NHG8 242 aa16.66■□□□□ 0.26
MCF2L-201ENST00000261963 RPL13AP40429 203 aaKnown RBP16.65■□□□□ 0.26
MCF2L-201ENST00000261963 SPINK13Q1W4C9 94 aa16.65■□□□□ 0.26
MCF2L-201ENST00000261963 ZNF843Q8N446 348 aa16.65■□□□□ 0.26
MCF2L-201ENST00000261963 SPANXA1Q9NS26 97 aa16.65■□□□□ 0.26
MCF2L-201ENST00000261963 C15orf53Q8NAA6 179 aa16.65■□□□□ 0.26
MCF2L-201ENST00000261963 TIMM17AQ99595 171 aa16.65■□□□□ 0.26
MCF2L-201ENST00000261963 Q1RN00 199 aa16.64■□□□□ 0.25
MCF2L-201ENST00000261963 TEX49A0A1B0GTD5 131 aa16.64■□□□□ 0.25
MCF2L-201ENST00000261963 RPL39P62891 51 aaKnown RBP16.64■□□□□ 0.25
MCF2L-201ENST00000261963 LINC01600Q96MT4 127 aa16.64■□□□□ 0.25
MCF2L-201ENST00000261963 MYO9AB2RTY4 2548 aa16.63■□□□□ 0.25
MCF2L-201ENST00000261963 ZNF876PQ49A33 203 aa16.63■□□□□ 0.25
MCF2L-201ENST00000261963 C18orf65Q6ZTR6 163 aa16.63■□□□□ 0.25
MCF2L-201ENST00000261963 TRAV2A0A0B4J234 112 aa16.62■□□□□ 0.25
MCF2L-201ENST00000261963 DEFB104AQ8WTQ1 72 aa16.62■□□□□ 0.25
MCF2L-201ENST00000261963 PRRC2AP48634 2157 aaKnown RBP16.62■□□□□ 0.25
MCF2L-201ENST00000261963 IGHV1OR15-1A0A075B7D0 117 aa16.62■□□□□ 0.25
MCF2L-201ENST00000261963 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-201ENST00000261963 F5H697 171 aa16.62■□□□□ 0.25
MCF2L-201ENST00000261963 MUSTN1Q8IVN3 82 aa16.62■□□□□ 0.25
MCF2L-201ENST00000261963 AKAP9Q99996 3911 aa16.61■□□□□ 0.25
MCF2L-201ENST00000261963 TRBV10-2A0A0K0K1G8 114 aa16.61■□□□□ 0.25
MCF2L-201ENST00000261963 DEFB113Q30KQ7 82 aa16.61■□□□□ 0.25
MCF2L-201ENST00000261963 ZNF469Q96JG9 3925 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-201ENST00000261963 H3BMM0 161 aa16.6■□□□□ 0.25
MCF2L-201ENST00000261963 VCYO14598 125 aa16.6■□□□□ 0.25
MCF2L-201ENST00000261963 DEFB136Q30KP8 78 aa16.6■□□□□ 0.25
MCF2L-201ENST00000261963 FAM74A4Q5TZK3 123 aa16.6■□□□□ 0.25
MCF2L-201ENST00000261963 UBE2WQ96B02 151 aa16.6■□□□□ 0.25
MCF2L-201ENST00000261963 LEPROTO15243 131 aa16.6■□□□□ 0.25
MCF2L-201ENST00000261963 SLURP1P55000 103 aa16.6■□□□□ 0.25
MCF2L-201ENST00000261963 SDHAF1A6NFY7 115 aa16.59■□□□□ 0.25
MCF2L-201ENST00000261963 TRBV6-5A0A0K0K1A5 114 aa16.59■□□□□ 0.25
MCF2L-201ENST00000261963 Q8N2B8 174 aa16.58■□□□□ 0.24
MCF2L-201ENST00000261963 TRBV27A0A0K0K1C4 114 aa16.57■□□□□ 0.24
MCF2L-201ENST00000261963 M0QY20 66 aa16.57■□□□□ 0.24
MCF2L-201ENST00000261963 TLN2Q9Y4G6 2542 aa16.57■□□□□ 0.24
MCF2L-201ENST00000261963 TMEM223A0PJW6 202 aa16.57■□□□□ 0.24
MCF2L-201ENST00000261963 TRBV30A0A0K0K1B3 111 aa16.56■□□□□ 0.24
MCF2L-201ENST00000261963 RBMY1A1P0DJD3 496 aaKnown RBP16.56■□□□□ 0.24
MCF2L-201ENST00000261963 RBMY1CP0DJD4 496 aa16.56■□□□□ 0.24
MCF2L-201ENST00000261963 RBMY1FQ15415 496 aaKnown RBP16.56■□□□□ 0.24
MCF2L-201ENST00000261963 MRPL23Q16540 153 aaKnown RBP16.56■□□□□ 0.24
MCF2L-201ENST00000261963 Q96MF0 132 aa16.56■□□□□ 0.24
MCF2L-201ENST00000261963 APCP25054 2843 aa16.55■□□□□ 0.24
MCF2L-201ENST00000261963 NBPF19A0A087WUL8 3843 aa16.55■□□□□ 0.24
MCF2L-201ENST00000261963 KNCNA6PVL3 124 aa16.55■□□□□ 0.24
MCF2L-201ENST00000261963 ZNF56Q15929 161 aa16.55■□□□□ 0.24
MCF2L-201ENST00000261963 MEIG1Q5JSS6 88 aa16.55■□□□□ 0.24
MCF2L-201ENST00000261963 LRRC75A-AS1Q8N1F1 130 aa16.55■□□□□ 0.24
MCF2L-201ENST00000261963 C2orf82Q6UX34 121 aa16.55■□□□□ 0.24
MCF2L-201ENST00000261963 TRIAP1O43715 76 aa16.54■□□□□ 0.24
MCF2L-201ENST00000261963 KRTAP1-3Q8IUG1 177 aa16.54■□□□□ 0.24
MCF2L-201ENST00000261963 M0R2P5 195 aa16.53■□□□□ 0.24
MCF2L-201ENST00000261963 DEFB131AP59861 70 aa16.53■□□□□ 0.24
MCF2L-201ENST00000261963 ZNF256Q9Y2P7 627 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-201ENST00000261963 IGHV3-64A0A075B6Q5 118 aa16.52■□□□□ 0.24
MCF2L-201ENST00000261963 DUX3Q96PT4 197 aa16.52■□□□□ 0.24
MCF2L-201ENST00000261963 TRGV11A0A075B6L2 103 aa16.51■□□□□ 0.23
MCF2L-201ENST00000261963 A8MTW9 85 aa16.51■□□□□ 0.23
MCF2L-201ENST00000261963 RBMY1BA6NDE4 496 aaKnown RBP16.5■□□□□ 0.23
MCF2L-201ENST00000261963 RBMY1EA6NEQ0 496 aaKnown RBP16.5■□□□□ 0.23
MCF2L-201ENST00000261963 RBMY1DP0C7P1 496 aaKnown RBP16.5■□□□□ 0.23
MCF2L-201ENST00000261963 H7C423 109 aa16.49■□□□□ 0.23
MCF2L-201ENST00000261963 ZNF22P17026 224 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-201ENST00000261963 TMEM61Q8N0U2 210 aa16.49■□□□□ 0.23
MCF2L-201ENST00000261963 OPRPNQ99935 248 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-201ENST00000261963 H3BT86 120 aa16.49■□□□□ 0.23
MCF2L-201ENST00000261963 HIST2H2BDQ6DRA6 164 aa16.49■□□□□ 0.23
MCF2L-201ENST00000261963 C4orf3Q8WVX3 66 aa16.49■□□□□ 0.23
MCF2L-201ENST00000261963 A0A0J9YXY3 114 aa16.48■□□□□ 0.23
MCF2L-201ENST00000261963 ITPR3Q14573 2671 aa16.48■□□□□ 0.23
MCF2L-201ENST00000261963 SONP18583 2426 aaKnown RBP16.48■□□□□ 0.23
MCF2L-201ENST00000261963 ICOSQ9Y6W8 199 aa16.48■□□□□ 0.23
MCF2L-201ENST00000261963 NSUN5P1Q3KNT7 163 aa16.47■□□□□ 0.23
MCF2L-201ENST00000261963 FAM240AA0A1B0GVK7 77 aa16.47■□□□□ 0.23
MCF2L-201ENST00000261963 COX6CP09669 75 aa16.46■□□□□ 0.23
MCF2L-201ENST00000261963 RHOHQ15669 191 aa16.46■□□□□ 0.23
MCF2L-201ENST00000261963 CHCHD5Q9BSY4 110 aa16.46■□□□□ 0.23
MCF2L-201ENST00000261963 PRM2P04554 102 aa16.46■□□□□ 0.23
MCF2L-201ENST00000261963 HTN1P15515 57 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms