RNA–Protein interactions for RNA: ENST00000261647.9

TTC19-201, Transcript of tetratricopeptide repeat domain 19, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC19, Length 3,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-201ENST00000261647 ID1P41134 155 aa13.81□□□□□ -0.2
TTC19-201ENST00000261647 DUX5Q96PT3 197 aa13.8□□□□□ -0.2
TTC19-201ENST00000261647 TRBV30A0A0K0K1B3 111 aa13.8□□□□□ -0.2
TTC19-201ENST00000261647 IGHV1OR15-1A0A075B7D0 117 aa13.8□□□□□ -0.2
TTC19-201ENST00000261647 M0QXV9 152 aa13.8□□□□□ -0.2
TTC19-201ENST00000261647 RPL13AP40429 203 aaKnown RBP13.8□□□□□ -0.2
TTC19-201ENST00000261647 NCOR2Q9Y618 2525 aa13.79□□□□□ -0.2
TTC19-201ENST00000261647 NACAE9PAV3 2078 aa13.79□□□□□ -0.2
TTC19-201ENST00000261647 IGHV4-61A0A0C4DH41 118 aa13.78□□□□□ -0.2
TTC19-201ENST00000261647 A0A0J9YX75 114 aa13.78□□□□□ -0.2
TTC19-201ENST00000261647 NDUFA12Q9UI09 145 aa13.78□□□□□ -0.2
TTC19-201ENST00000261647 RBMY1A1P0DJD3 496 aaKnown RBP13.77□□□□□ -0.21
TTC19-201ENST00000261647 RBMY1CP0DJD4 496 aa13.77□□□□□ -0.21
TTC19-201ENST00000261647 RBMY1FQ15415 496 aaKnown RBP13.77□□□□□ -0.21
TTC19-201ENST00000261647 CHD8Q9HCK8 2581 aa13.76□□□□□ -0.21
TTC19-201ENST00000261647 A0A0U1RRA0 63 aa13.76□□□□□ -0.21
TTC19-201ENST00000261647 C19orf84I3L1E1 186 aa13.76□□□□□ -0.21
TTC19-201ENST00000261647 IGLV1-40P01703 118 aa13.76□□□□□ -0.21
TTC19-201ENST00000261647 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.75□□□□□ -0.21
TTC19-201ENST00000261647 IGKV2-29A2NJV5 120 aaPredicted RBP13.75□□□□□ -0.21
TTC19-201ENST00000261647 A6NDX4 124 aa13.75□□□□□ -0.21
TTC19-201ENST00000261647 Q6Q795 121 aa13.75□□□□□ -0.21
TTC19-201ENST00000261647 Q6ZSN1 163 aa13.75□□□□□ -0.21
TTC19-201ENST00000261647 IGHV3-38A0A0C4DH36 116 aa13.75□□□□□ -0.21
TTC19-201ENST00000261647 COX6CP09669 75 aa13.75□□□□□ -0.21
TTC19-201ENST00000261647 MRPS36P82909 103 aaKnown RBP13.74□□□□□ -0.21
TTC19-201ENST00000261647 IGHV1-58A0A0C4DH39 117 aa13.74□□□□□ -0.21
TTC19-201ENST00000261647 ZANQ9Y493 2812 aa13.73□□□□□ -0.21
TTC19-201ENST00000261647 TRGV11A0A075B6L2 103 aa13.72□□□□□ -0.21
TTC19-201ENST00000261647 KLRB1Q12918 225 aa13.72□□□□□ -0.21
TTC19-201ENST00000261647 ZNF625Q96I27 306 aaPredicted RBP13.72□□□□□ -0.21
TTC19-201ENST00000261647 FAM110AQ9BQ89 295 aa13.72□□□□□ -0.21
TTC19-201ENST00000261647 SYNJ2BPP57105 145 aa13.72□□□□□ -0.21
TTC19-201ENST00000261647 VSIG2Q96IQ7 327 aa13.72□□□□□ -0.21
TTC19-201ENST00000261647 H3BUA1 57 aa13.71□□□□□ -0.21
TTC19-201ENST00000261647 BRI3O95415 125 aa13.71□□□□□ -0.21
TTC19-201ENST00000261647 MIAQ16674 131 aa13.71□□□□□ -0.21
TTC19-201ENST00000261647 AVPP01185 164 aa13.71□□□□□ -0.22
TTC19-201ENST00000261647 SNRPD3P62318 126 aaKnown RBP13.71□□□□□ -0.22
TTC19-201ENST00000261647 K7EMT4 169 aa13.7□□□□□ -0.22
TTC19-201ENST00000261647 K7EQG2 157 aa13.7□□□□□ -0.22
TTC19-201ENST00000261647 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.7□□□□□ -0.22
TTC19-201ENST00000261647 LST1O00453 97 aa13.69□□□□□ -0.22
TTC19-201ENST00000261647 CFHR3Q02985 330 aa13.69□□□□□ -0.22
TTC19-201ENST00000261647 TMEM61Q8N0U2 210 aa13.69□□□□□ -0.22
TTC19-201ENST00000261647 H3BT86 120 aa13.69□□□□□ -0.22
TTC19-201ENST00000261647 TNFRSF18Q9Y5U5 241 aa13.69□□□□□ -0.22
TTC19-201ENST00000261647 FAM236AA0A1B0GUQ0 79 aa13.69□□□□□ -0.22
TTC19-201ENST00000261647 FAM236BA0A1B0GV22 79 aa13.69□□□□□ -0.22
TTC19-201ENST00000261647 SPANXDQ9BXN6 97 aa13.69□□□□□ -0.22
TTC19-201ENST00000261647 SPANXCQ9NY87 97 aa13.69□□□□□ -0.22
TTC19-201ENST00000261647 CDKN2A-AS1Q9UH64 79 aa13.69□□□□□ -0.22
TTC19-201ENST00000261647 LINC00467Q9BRT7 94 aa13.68□□□□□ -0.22
TTC19-201ENST00000261647 CHCHD7Q9BUK0 85 aa13.68□□□□□ -0.22
TTC19-201ENST00000261647 SPTBN4Q9H254 2564 aa13.68□□□□□ -0.22
TTC19-201ENST00000261647 C2CD3Q4AC94 2353 aa13.68□□□□□ -0.22
TTC19-201ENST00000261647 UTP20O75691 2785 aaKnown RBP13.67□□□□□ -0.22
TTC19-201ENST00000261647 PYGO1Q9Y3Y4 419 aa13.67□□□□□ -0.22
TTC19-201ENST00000261647 LINC01600Q96MT4 127 aa13.67□□□□□ -0.22
TTC19-201ENST00000261647 CITED2Q99967 270 aaPredicted RBP13.66□□□□□ -0.22
TTC19-201ENST00000261647 UBE2D4Q9Y2X8 147 aa13.66□□□□□ -0.22
TTC19-201ENST00000261647 LY6DQ14210 128 aa13.66□□□□□ -0.22
TTC19-201ENST00000261647 PSMB8P28062 276 aa13.66□□□□□ -0.22
TTC19-201ENST00000261647 CFAP161Q6P656 301 aa13.66□□□□□ -0.22
TTC19-201ENST00000261647 COX6A2Q02221 97 aa13.65□□□□□ -0.22
TTC19-201ENST00000261647 NOTCH3Q9UM47 2321 aa13.65□□□□□ -0.22
TTC19-201ENST00000261647 IGHV4-59P01825 116 aa13.64□□□□□ -0.23
TTC19-201ENST00000261647 TINCRA0A1B0GVN0 87 aa13.64□□□□□ -0.23
TTC19-201ENST00000261647 NDUFA7O95182 113 aa13.64□□□□□ -0.23
TTC19-201ENST00000261647 USP9YO00507 2555 aaPredicted RBP13.63□□□□□ -0.23
TTC19-201ENST00000261647 IGHV4-30-2A0A087WSY4 118 aa13.63□□□□□ -0.23
TTC19-201ENST00000261647 HIST2H2BDQ6DRA6 164 aa13.63□□□□□ -0.23
TTC19-201ENST00000261647 Q8N2B8 174 aa13.63□□□□□ -0.23
TTC19-201ENST00000261647 ITPR1Q14643 2758 aa13.63□□□□□ -0.23
TTC19-201ENST00000261647 TMEM101Q96IK0 257 aa13.63□□□□□ -0.23
TTC19-201ENST00000261647 SMCR5Q8TEV8 140 aa13.62□□□□□ -0.23
TTC19-201ENST00000261647 LINC01587Q99440 93 aa13.62□□□□□ -0.23
TTC19-201ENST00000261647 PPDPFQ9H3Y8 114 aa13.62□□□□□ -0.23
TTC19-201ENST00000261647 NBL1P41271 181 aa13.62□□□□□ -0.23
TTC19-201ENST00000261647 MXRA5Q9NR99 2828 aa13.61□□□□□ -0.23
TTC19-201ENST00000261647 RBMY1BA6NDE4 496 aaKnown RBP13.61□□□□□ -0.23
TTC19-201ENST00000261647 RBMY1EA6NEQ0 496 aaKnown RBP13.61□□□□□ -0.23
TTC19-201ENST00000261647 RBMY1DP0C7P1 496 aaKnown RBP13.61□□□□□ -0.23
TTC19-201ENST00000261647 DEFB131AP59861 70 aa13.61□□□□□ -0.23
TTC19-201ENST00000261647 Q9H8V8 135 aa13.6□□□□□ -0.23
TTC19-201ENST00000261647 DEFB136Q30KP8 78 aa13.59□□□□□ -0.23
TTC19-201ENST00000261647 SOSTDC1Q6X4U4 206 aa13.59□□□□□ -0.23
TTC19-201ENST00000261647 PIMREGQ9BSJ6 248 aa13.59□□□□□ -0.23
TTC19-201ENST00000261647 MRPL23Q16540 153 aaKnown RBP13.59□□□□□ -0.23
TTC19-201ENST00000261647 TRBV7-7A0A0K0K1E9 115 aa13.58□□□□□ -0.23
TTC19-201ENST00000261647 FAM240AA0A1B0GVK7 77 aa13.58□□□□□ -0.23
TTC19-201ENST00000261647 C18orf65Q6ZTR6 163 aa13.58□□□□□ -0.23
TTC19-201ENST00000261647 YAE1D1Q9NRH1 226 aa13.58□□□□□ -0.23
TTC19-201ENST00000261647 LINC00308Q8TCZ7 52 aa13.58□□□□□ -0.24
TTC19-201ENST00000261647 DEFB121Q5J5C9 76 aa13.58□□□□□ -0.24
TTC19-201ENST00000261647 C10orf105Q8TEF2 133 aa13.58□□□□□ -0.24
TTC19-201ENST00000261647 HOXD3P31249 432 aaPredicted RBP13.57□□□□□ -0.24
TTC19-201ENST00000261647 DEFB112Q30KQ8 113 aa13.57□□□□□ -0.24
TTC19-201ENST00000261647 KLK5Q9Y337 293 aaPredicted RBP13.57□□□□□ -0.24
TTC19-201ENST00000261647 POLQO75417 2590 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms