RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 TNRC6BQ9UPQ9 1833 aaKnown RBP6.36□□□□□ -1.39
SNCAIP-201ENST00000261367 BRWD1-AS2P59051 145 aa6.36□□□□□ -1.39
SNCAIP-201ENST00000261367 HIGD2BQ4VC39 106 aa6.36□□□□□ -1.39
SNCAIP-201ENST00000261367 LINC01546A6NGU7 62 aa6.36□□□□□ -1.39
SNCAIP-201ENST00000261367 ENHOQ6UWT2 76 aa6.36□□□□□ -1.39
SNCAIP-201ENST00000261367 IGLV2-11P01706 119 aa6.35□□□□□ -1.39
SNCAIP-201ENST00000261367 WIPF1O43516 503 aa6.35□□□□□ -1.39
SNCAIP-201ENST00000261367 CTSGP08311 255 aa6.35□□□□□ -1.39
SNCAIP-201ENST00000261367 NRACQ8N912 160 aa6.35□□□□□ -1.39
SNCAIP-201ENST00000261367 COL27A1Q8IZC6 1860 aaPredicted RBP6.35□□□□□ -1.39
SNCAIP-201ENST00000261367 ADAMTS9Q9P2N4 1935 aa6.35□□□□□ -1.39
SNCAIP-201ENST00000261367 PTPRQQ9UMZ3 2332 aa6.35□□□□□ -1.39
SNCAIP-201ENST00000261367 OVOL3O00110 214 aa6.35□□□□□ -1.39
SNCAIP-201ENST00000261367 COX8CQ7Z4L0 72 aa6.35□□□□□ -1.39
SNCAIP-201ENST00000261367 AJUBAQ96IF1 538 aa6.35□□□□□ -1.39
SNCAIP-201ENST00000261367 PRO0461Q9UI25 63 aa6.35□□□□□ -1.39
SNCAIP-201ENST00000261367 GTF3C1Q12789 2109 aa6.35□□□□□ -1.39
SNCAIP-201ENST00000261367 IGHV4OR15-8A0A075B7B6 117 aa6.35□□□□□ -1.39
SNCAIP-201ENST00000261367 A0A087WW49 117 aa6.35□□□□□ -1.39
SNCAIP-201ENST00000261367 DSCR9P59020 149 aa6.35□□□□□ -1.39
SNCAIP-201ENST00000261367 PIK3CD-AS1Q5SR53 167 aa6.35□□□□□ -1.39
SNCAIP-201ENST00000261367 SPINK13Q1W4C9 94 aa6.34□□□□□ -1.39
SNCAIP-201ENST00000261367 NKAPP1Q8N9T2 125 aa6.34□□□□□ -1.39
SNCAIP-201ENST00000261367 TRBV27A0A0K0K1C4 114 aa6.34□□□□□ -1.39
SNCAIP-201ENST00000261367 F8WDY8 70 aa6.34□□□□□ -1.39
SNCAIP-201ENST00000261367 MIFP14174 115 aa6.34□□□□□ -1.39
SNCAIP-201ENST00000261367 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.34□□□□□ -1.39
SNCAIP-201ENST00000261367 PATE3B3GLJ2 98 aa6.34□□□□□ -1.39
SNCAIP-201ENST00000261367 DEFB104AQ8WTQ1 72 aa6.34□□□□□ -1.39
SNCAIP-201ENST00000261367 ZNRD1Q9P1U0 126 aa6.34□□□□□ -1.39
SNCAIP-201ENST00000261367 KLK9Q9UKQ9 250 aa6.34□□□□□ -1.39
SNCAIP-201ENST00000261367 INTS1Q8N201 2190 aaKnown RBP6.34□□□□□ -1.4
SNCAIP-201ENST00000261367 IBA57-AS1B1ANH7 110 aa6.34□□□□□ -1.4
SNCAIP-201ENST00000261367 J3QKU1 62 aa6.34□□□□□ -1.4
SNCAIP-201ENST00000261367 K7EMT4 169 aa6.34□□□□□ -1.4
SNCAIP-201ENST00000261367 NDUFS5O43920 106 aa6.34□□□□□ -1.4
SNCAIP-201ENST00000261367 PRB4P10163 310 aaPredicted RBP6.34□□□□□ -1.4
SNCAIP-201ENST00000261367 PIEZO2Q9H5I5 2752 aa6.34□□□□□ -1.4
SNCAIP-201ENST00000261367 LRRK2Q5S007 2527 aa6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 TRBV10-1A0A0K0K1A3 114 aa6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 IGKV2-29A2NJV5 120 aaPredicted RBP6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 CCKP06307 115 aa6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 MUC7Q8TAX7 377 aa6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 ASH1LQ9NR48 2969 aaKnown RBP6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 DIAPH2-AS1Q14236 149 aa6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 Q6ZQT7 251 aa6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 FAM19A3Q7Z5A8 133 aa6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 CADP27708 2225 aa6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 NBASA2RRP1 2371 aa6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 CGB3P0DN86 165 aa6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 CGB7P0DN87 165 aa6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 PMAIP1Q13794 54 aa6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 DPH3Q96FX2 82 aa6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 ZNF561-AS1K7EIQ3 104 aa6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 CCL19Q99731 98 aa6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 Q9HAA7 133 aa6.33□□□□□ -1.4
SNCAIP-201ENST00000261367 COL12A1Q99715 3063 aa6.32□□□□□ -1.4
SNCAIP-201ENST00000261367 A0A0G2JNJ9 132 aa6.32□□□□□ -1.4
SNCAIP-201ENST00000261367 K7EQD1 137 aa6.32□□□□□ -1.4
SNCAIP-201ENST00000261367 BPY2O14599 106 aa6.32□□□□□ -1.4
SNCAIP-201ENST00000261367 MIR7-3HGQ8N6C7 128 aa6.32□□□□□ -1.4
SNCAIP-201ENST00000261367 DIRC1Q969H9 104 aa6.32□□□□□ -1.4
SNCAIP-201ENST00000261367 Q9UFV3 132 aa6.32□□□□□ -1.4
SNCAIP-201ENST00000261367 BSNQ9UPA5 3926 aa6.32□□□□□ -1.4
SNCAIP-201ENST00000261367 CRIP1P50238 77 aa6.32□□□□□ -1.4
SNCAIP-201ENST00000261367 SPTSSBQ8NFR3 76 aa6.32□□□□□ -1.4
SNCAIP-201ENST00000261367 IGLV4-3A0A075B6K6 122 aa6.32□□□□□ -1.4
SNCAIP-201ENST00000261367 XCL1P47992 114 aa6.32□□□□□ -1.4
SNCAIP-201ENST00000261367 XCL2Q9UBD3 114 aa6.32□□□□□ -1.4
SNCAIP-201ENST00000261367 USF3Q68DE3 2245 aa6.32□□□□□ -1.4
SNCAIP-201ENST00000261367 HOXB4P17483 251 aaPredicted RBP6.31□□□□□ -1.4
SNCAIP-201ENST00000261367 PTPN13Q12923 2485 aa6.31□□□□□ -1.4
SNCAIP-201ENST00000261367 ZNF80P51504 273 aaPredicted RBP6.31□□□□□ -1.4
SNCAIP-201ENST00000261367 DEFB131AP59861 70 aa6.31□□□□□ -1.4
SNCAIP-201ENST00000261367 PIP4P2Q8N4L2 257 aa6.31□□□□□ -1.4
SNCAIP-201ENST00000261367 GATA3P23771 443 aa6.31□□□□□ -1.4
SNCAIP-201ENST00000261367 LINC01560Q8TB33 94 aa6.31□□□□□ -1.4
SNCAIP-201ENST00000261367 PCNX1Q96RV3 2341 aa6.31□□□□□ -1.4
SNCAIP-201ENST00000261367 GNLYP22749 145 aa6.3□□□□□ -1.4
SNCAIP-201ENST00000261367 MED13Q9UHV7 2174 aa6.3□□□□□ -1.4
SNCAIP-201ENST00000261367 IGHV3-38A0A0C4DH36 116 aa6.3□□□□□ -1.4
SNCAIP-201ENST00000261367 PRAC2D3DTV9 90 aa6.3□□□□□ -1.4
SNCAIP-201ENST00000261367 J3QLI3 93 aa6.3□□□□□ -1.4
SNCAIP-201ENST00000261367 SAA4P35542 130 aa6.3□□□□□ -1.4
SNCAIP-201ENST00000261367 RNASE13Q5GAN3 156 aaKnown RBP6.3□□□□□ -1.4
SNCAIP-201ENST00000261367 FASNP49327 2511 aaKnown RBP6.3□□□□□ -1.4
SNCAIP-201ENST00000261367 TMEM89A2RUT3 159 aa6.29□□□□□ -1.4
SNCAIP-201ENST00000261367 PRR15LQ9BU68 103 aa6.29□□□□□ -1.4
SNCAIP-201ENST00000261367 ATP1A1-AS1Q5TC04 95 aa6.29□□□□□ -1.4
SNCAIP-201ENST00000261367 PCSK5Q92824 1860 aa6.29□□□□□ -1.4
SNCAIP-201ENST00000261367 ABCA1O95477 2261 aa6.29□□□□□ -1.4
SNCAIP-201ENST00000261367 MAP1AP78559 2803 aaPredicted RBP6.29□□□□□ -1.4
SNCAIP-201ENST00000261367 SONP18583 2426 aaKnown RBP6.29□□□□□ -1.4
SNCAIP-201ENST00000261367 NCOR2Q9Y618 2525 aa6.29□□□□□ -1.4
SNCAIP-201ENST00000261367 IGHV3-53P01767 116 aa6.29□□□□□ -1.4
SNCAIP-201ENST00000261367 A0A096LNJ9 63 aa6.28□□□□□ -1.4
SNCAIP-201ENST00000261367 RPL28P46779 137 aaKnown RBP6.28□□□□□ -1.4
SNCAIP-201ENST00000261367 C9orf85Q96MD7 179 aa6.28□□□□□ -1.4
SNCAIP-201ENST00000261367 RPL35AP18077 110 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms