RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 GAGE7O76087 117 aa11.84□□□□□ -0.51
SDCBP-201ENST00000260130 ATP5G1P05496 136 aa11.84□□□□□ -0.51
SDCBP-201ENST00000260130 GAGE12FP0CL80 117 aa11.84□□□□□ -0.51
SDCBP-201ENST00000260130 GAGE12GP0CL81 117 aa11.84□□□□□ -0.51
SDCBP-201ENST00000260130 GAGE12IP0CL82 117 aa11.84□□□□□ -0.51
SDCBP-201ENST00000260130 ZNF415Q09FC8 603 aa11.84□□□□□ -0.51
SDCBP-201ENST00000260130 Q6ZTI0 123 aa11.84□□□□□ -0.51
SDCBP-201ENST00000260130 MDFICQ9P1T7 246 aa11.84□□□□□ -0.51
SDCBP-201ENST00000260130 APLNQ9ULZ1 77 aa11.84□□□□□ -0.51
SDCBP-201ENST00000260130 RYR3Q15413 4870 aa11.83□□□□□ -0.52
SDCBP-201ENST00000260130 C9orf118A6NHY6 69 aa11.83□□□□□ -0.52
SDCBP-201ENST00000260130 NMUP48645 174 aa11.83□□□□□ -0.52
SDCBP-201ENST00000260130 GTF2H5Q6ZYL4 71 aa11.83□□□□□ -0.52
SDCBP-201ENST00000260130 C18orf15Q96N68 181 aa11.83□□□□□ -0.52
SDCBP-201ENST00000260130 DNAH1Q9P2D7 4330 aa11.83□□□□□ -0.52
SDCBP-201ENST00000260130 GNRH2O43555 120 aa11.82□□□□□ -0.52
SDCBP-201ENST00000260130 Q8N8P6 123 aa11.82□□□□□ -0.52
SDCBP-201ENST00000260130 C11orf21Q9P2W6 132 aa11.82□□□□□ -0.52
SDCBP-201ENST00000260130 TRGV1A0A0A0MS02 117 aa11.82□□□□□ -0.52
SDCBP-201ENST00000260130 GAGE10A6NGK3 116 aa11.82□□□□□ -0.52
SDCBP-201ENST00000260130 ALMS1Q8TCU4 4167 aa11.82□□□□□ -0.52
SDCBP-201ENST00000260130 IGKV3D-20A0A0C4DH25 116 aa11.81□□□□□ -0.52
SDCBP-201ENST00000260130 ATP5LO75964 103 aa11.81□□□□□ -0.52
SDCBP-201ENST00000260130 EVI2AP22794 236 aa11.81□□□□□ -0.52
SDCBP-201ENST00000260130 OCIAD2Q56VL3 154 aa11.81□□□□□ -0.52
SDCBP-201ENST00000260130 PRSS1P07477 247 aa11.81□□□□□ -0.52
SDCBP-201ENST00000260130 ODF1Q14990 250 aa11.81□□□□□ -0.52
SDCBP-201ENST00000260130 LINC00476Q8WZB0 136 aa11.81□□□□□ -0.52
SDCBP-201ENST00000260130 TRGV2A0A075B6R0 118 aa11.8□□□□□ -0.52
SDCBP-201ENST00000260130 IGHV3-16A0A0C4DH30 117 aa11.8□□□□□ -0.52
SDCBP-201ENST00000260130 F5H768 121 aa11.8□□□□□ -0.52
SDCBP-201ENST00000260130 GAS8-AS1O95177 125 aa11.8□□□□□ -0.52
SDCBP-201ENST00000260130 C21orf62-AS1Q17RA5 79 aa11.8□□□□□ -0.52
SDCBP-201ENST00000260130 RNF151Q2KHN1 245 aa11.8□□□□□ -0.52
SDCBP-201ENST00000260130 PCP2Q8IVA1 136 aa11.8□□□□□ -0.52
SDCBP-201ENST00000260130 SPXQ9BT56 116 aa11.8□□□□□ -0.52
SDCBP-201ENST00000260130 PRSS47A8MTI9 375 aa11.79□□□□□ -0.52
SDCBP-201ENST00000260130 IGKCP01834 107 aa11.79□□□□□ -0.52
SDCBP-201ENST00000260130 RYR2Q92736 4967 aa11.79□□□□□ -0.52
SDCBP-201ENST00000260130 LY6G6CO95867 125 aa11.79□□□□□ -0.52
SDCBP-201ENST00000260130 MRPL16Q9NX20 251 aaKnown RBP11.79□□□□□ -0.52
SDCBP-201ENST00000260130 HIGD1BQ9P298 99 aa11.79□□□□□ -0.52
SDCBP-201ENST00000260130 IGLV2-18A0A075B6J9 118 aa11.78□□□□□ -0.52
SDCBP-201ENST00000260130 K7ERU9 68 aa11.78□□□□□ -0.52
SDCBP-201ENST00000260130 DPM2O94777 84 aa11.78□□□□□ -0.52
SDCBP-201ENST00000260130 GATA1P15976 413 aaPredicted RBP11.78□□□□□ -0.52
SDCBP-201ENST00000260130 UFSP1Q6NVU6 142 aa11.78□□□□□ -0.52
SDCBP-201ENST00000260130 HHLA3Q9XRX5 114 aa11.78□□□□□ -0.52
SDCBP-201ENST00000260130 H3BUT2 72 aa11.77□□□□□ -0.53
SDCBP-201ENST00000260130 LAGE3Q14657 143 aa11.77□□□□□ -0.53
SDCBP-201ENST00000260130 SMIM17P0DL12 118 aa11.77□□□□□ -0.53
SDCBP-201ENST00000260130 SPANXN1Q5VSR9 72 aa11.77□□□□□ -0.53
SDCBP-201ENST00000260130 RASL10AQ92737 203 aa11.77□□□□□ -0.53
SDCBP-201ENST00000260130 K7EP34 96 aa11.76□□□□□ -0.53
SDCBP-201ENST00000260130 M0R2P5 195 aa11.75□□□□□ -0.53
SDCBP-201ENST00000260130 NRACQ8N912 160 aa11.75□□□□□ -0.53
SDCBP-201ENST00000260130 VPS25Q9BRG1 176 aa11.75□□□□□ -0.53
SDCBP-201ENST00000260130 MRAP2Q96G30 205 aa11.75□□□□□ -0.53
SDCBP-201ENST00000260130 HYDINQ4G0P3 5121 aa11.74□□□□□ -0.53
SDCBP-201ENST00000260130 IGKV2D-26A0A0A0MRZ7 120 aa11.74□□□□□ -0.53
SDCBP-201ENST00000260130 SMIM13P0DJ93 91 aa11.74□□□□□ -0.53
SDCBP-201ENST00000260130 C15orf53Q8NAA6 179 aa11.74□□□□□ -0.53
SDCBP-201ENST00000260130 VPS13DQ5THJ4 4388 aa11.74□□□□□ -0.53
SDCBP-201ENST00000260130 OR5A1Q8NGJ0 315 aa11.74□□□□□ -0.53
SDCBP-201ENST00000260130 RAB37Q96AX2 223 aa11.74□□□□□ -0.53
SDCBP-201ENST00000260130 C9orf85Q96MD7 179 aa11.74□□□□□ -0.53
SDCBP-201ENST00000260130 RNASE3P12724 160 aaKnown RBP11.73□□□□□ -0.53
SDCBP-201ENST00000260130 ZC2HC1BQ5TFG8 222 aa11.73□□□□□ -0.53
SDCBP-201ENST00000260130 CHAC1Q9BUX1 264 aa11.73□□□□□ -0.53
SDCBP-201ENST00000260130 TRAV26-1A0A087WT03 109 aa11.72□□□□□ -0.53
SDCBP-201ENST00000260130 A0A1W2PPM0 123 aa11.72□□□□□ -0.53
SDCBP-201ENST00000260130 IGHV3-53P01767 116 aa11.72□□□□□ -0.53
SDCBP-201ENST00000260130 S100A4P26447 101 aaKnown RBP11.72□□□□□ -0.53
SDCBP-201ENST00000260130 ASIPP42127 132 aa11.72□□□□□ -0.53
SDCBP-201ENST00000260130 TRAV26-2A0A0B4J265 109 aa11.72□□□□□ -0.53
SDCBP-201ENST00000260130 H3BVH4 76 aa11.72□□□□□ -0.53
SDCBP-201ENST00000260130 P0DMU3 169 aa11.72□□□□□ -0.53
SDCBP-201ENST00000260130 FAM231AP0DMU4 169 aa11.72□□□□□ -0.53
SDCBP-201ENST00000260130 FAM231CP0DMU5 169 aa11.72□□□□□ -0.53
SDCBP-201ENST00000260130 GCSHP23434 173 aa11.72□□□□□ -0.53
SDCBP-201ENST00000260130 A0A087WX48 190 aa11.71□□□□□ -0.53
SDCBP-201ENST00000260130 FABP2P12104 132 aa11.71□□□□□ -0.53
SDCBP-201ENST00000260130 ZNF876PQ49A33 203 aa11.71□□□□□ -0.53
SDCBP-201ENST00000260130 TRBV25-1A0A075B6N4 114 aa11.71□□□□□ -0.54
SDCBP-201ENST00000260130 A0A0J9YY99 117 aa11.71□□□□□ -0.54
SDCBP-201ENST00000260130 PLNP26678 52 aa11.71□□□□□ -0.54
SDCBP-201ENST00000260130 MRPL35Q9NZE8 188 aaKnown RBP11.71□□□□□ -0.54
SDCBP-201ENST00000260130 SPCS1Q9Y6A9 102 aa11.71□□□□□ -0.54
SDCBP-201ENST00000260130 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.7□□□□□ -0.54
SDCBP-201ENST00000260130 POM121L12Q8N7R1 296 aa11.7□□□□□ -0.54
SDCBP-201ENST00000260130 PTH2Q96A98 100 aa11.7□□□□□ -0.54
SDCBP-201ENST00000260130 ZNF479Q96JC4 524 aa11.7□□□□□ -0.54
SDCBP-201ENST00000260130 NAA38Q9BRA0 125 aaKnown RBP11.7□□□□□ -0.54
SDCBP-201ENST00000260130 SMIM2Q9BVW6 85 aa11.7□□□□□ -0.54
SDCBP-201ENST00000260130 H3BNG1 76 aa11.69□□□□□ -0.54
SDCBP-201ENST00000260130 COTL1Q14019 142 aa11.69□□□□□ -0.54
SDCBP-201ENST00000260130 FHL2Q14192 279 aa11.69□□□□□ -0.54
SDCBP-201ENST00000260130 ORMDL2Q53FV1 153 aa11.69□□□□□ -0.54
SDCBP-201ENST00000260130 KMT2AQ03164 3969 aa11.69□□□□□ -0.54
SDCBP-201ENST00000260130 TRAV4A0A0B4J268 109 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms