RNA–Protein interactions for RNA: ENST00000258387.5

PAX3-201, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 958 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-201ENST00000258387 MED9Q9NWA0 146 aa11.93□□□□□ -0.5
PAX3-201ENST00000258387 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.92□□□□□ -0.5
PAX3-201ENST00000258387 IGKV3OR2-268A0A0C4DH90 116 aa11.92□□□□□ -0.5
PAX3-201ENST00000258387 AMTP48728 403 aa11.92□□□□□ -0.5
PAX3-201ENST00000258387 SULT1A2P50226 295 aa11.92□□□□□ -0.5
PAX3-201ENST00000258387 TEX46H3BTG2 121 aa11.91□□□□□ -0.5
PAX3-201ENST00000258387 COTL1Q14019 142 aa11.91□□□□□ -0.5
PAX3-201ENST00000258387 TWIST1Q15672 202 aa11.91□□□□□ -0.5
PAX3-201ENST00000258387 PGLYRP4Q96LB8 373 aa11.91□□□□□ -0.5
PAX3-201ENST00000258387 A0A087WYN8 130 aa11.9□□□□□ -0.5
PAX3-201ENST00000258387 GAGE12HA6NDE8 117 aa11.9□□□□□ -0.5
PAX3-201ENST00000258387 PDE6DO43924 150 aa11.9□□□□□ -0.5
PAX3-201ENST00000258387 MEF2BQ02080 365 aaPredicted RBP11.9□□□□□ -0.5
PAX3-201ENST00000258387 CIRBPQ14011 172 aaKnown RBP11.9□□□□□ -0.5
PAX3-201ENST00000258387 WDR73Q6P4I2 378 aa11.9□□□□□ -0.5
PAX3-201ENST00000258387 C9orf62Q8N4C0 152 aa11.9□□□□□ -0.5
PAX3-201ENST00000258387 TRBV20OR9-2A0A075B6H5 130 aa11.89□□□□□ -0.51
PAX3-201ENST00000258387 NUDT10Q8NFP7 164 aa11.89□□□□□ -0.51
PAX3-201ENST00000258387 SMIM12Q96EX1 92 aa11.89□□□□□ -0.51
PAX3-201ENST00000258387 NUDT11Q96G61 164 aa11.89□□□□□ -0.51
PAX3-201ENST00000258387 TRAV26-2A0A0B4J265 109 aa11.88□□□□□ -0.51
PAX3-201ENST00000258387 EIF5AL1Q6IS14 154 aaKnown RBP11.88□□□□□ -0.51
PAX3-201ENST00000258387 Q6ZRU5 148 aa11.88□□□□□ -0.51
PAX3-201ENST00000258387 BIN3Q9NQY0 253 aa11.88□□□□□ -0.51
PAX3-201ENST00000258387 MT1HL1P0DM35 61 aa11.87□□□□□ -0.51
PAX3-201ENST00000258387 GATD1Q8NB37 220 aa11.87□□□□□ -0.51
PAX3-201ENST00000258387 SPACA4Q8TDM5 124 aa11.87□□□□□ -0.51
PAX3-201ENST00000258387 RNF185Q96GF1 192 aa11.87□□□□□ -0.51
PAX3-201ENST00000258387 HIGD2BQ4VC39 106 aa11.86□□□□□ -0.51
PAX3-201ENST00000258387 CFAP161Q6P656 301 aa11.86□□□□□ -0.51
PAX3-201ENST00000258387 C15orf56Q8N910 161 aa11.86□□□□□ -0.51
PAX3-201ENST00000258387 BCL2P10415 239 aa11.85□□□□□ -0.51
PAX3-201ENST00000258387 CTRLP40313 264 aa11.85□□□□□ -0.51
PAX3-201ENST00000258387 COX6A2Q02221 97 aa11.85□□□□□ -0.51
PAX3-201ENST00000258387 AMMECR1LQ6DCA0 310 aa11.85□□□□□ -0.51
PAX3-201ENST00000258387 RNASE7Q9H1E1 156 aaKnown RBP11.85□□□□□ -0.51
PAX3-201ENST00000258387 FOXA3P55318 350 aaPredicted RBP11.84□□□□□ -0.51
PAX3-201ENST00000258387 RNASEKQ6P5S7 137 aaKnown RBP11.84□□□□□ -0.51
PAX3-201ENST00000258387 Q6ZNX1 250 aa11.84□□□□□ -0.51
PAX3-201ENST00000258387 RPL39LQ96EH5 51 aaKnown RBP11.84□□□□□ -0.51
PAX3-201ENST00000258387 RPP21Q9H633 154 aaKnown RBP11.84□□□□□ -0.51
PAX3-201ENST00000258387 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.83□□□□□ -0.52
PAX3-201ENST00000258387 IGKV2-29A2NJV5 120 aaPredicted RBP11.83□□□□□ -0.52
PAX3-201ENST00000258387 PHOX2AO14813 284 aa11.83□□□□□ -0.52
PAX3-201ENST00000258387 RPS10P46783 165 aaKnown RBP11.83□□□□□ -0.52
PAX3-201ENST00000258387 OCC1Q8TAD7 63 aa11.83□□□□□ -0.52
PAX3-201ENST00000258387 CHCHD10Q8WYQ3 142 aaPredicted RBP11.83□□□□□ -0.52
PAX3-201ENST00000258387 PLAC8Q9NZF1 115 aa11.83□□□□□ -0.52
PAX3-201ENST00000258387 IGKV2-24A0A0C4DH68 120 aa11.82□□□□□ -0.52
PAX3-201ENST00000258387 MAJINQ3KP22 176 aa11.82□□□□□ -0.52
PAX3-201ENST00000258387 PRSS3P2Q8NHM4 247 aa11.82□□□□□ -0.52
PAX3-201ENST00000258387 GTSF1Q8WW33 167 aa11.82□□□□□ -0.52
PAX3-201ENST00000258387 CNFNQ9BYD5 112 aa11.82□□□□□ -0.52
PAX3-201ENST00000258387 K7EN84 100 aa11.81□□□□□ -0.52
PAX3-201ENST00000258387 SMIM15Q7Z3B0 74 aa11.81□□□□□ -0.52
PAX3-201ENST00000258387 C7orf33Q8WU49 177 aa11.81□□□□□ -0.52
PAX3-201ENST00000258387 NDUFS6O75380 124 aaKnown RBP11.8□□□□□ -0.52
PAX3-201ENST00000258387 LYPD6BQ8NI32 183 aa11.8□□□□□ -0.52
PAX3-201ENST00000258387 APCSP02743 223 aa11.79□□□□□ -0.52
PAX3-201ENST00000258387 FGF6P10767 208 aa11.79□□□□□ -0.52
PAX3-201ENST00000258387 NCR2O95944 276 aa11.78□□□□□ -0.52
PAX3-201ENST00000258387 PMCHP20382 165 aa11.78□□□□□ -0.52
PAX3-201ENST00000258387 SDHAF1A6NFY7 115 aa11.77□□□□□ -0.53
PAX3-201ENST00000258387 TAGLN2P37802 199 aaKnown RBP11.77□□□□□ -0.53
PAX3-201ENST00000258387 XCL1P47992 114 aa11.77□□□□□ -0.53
PAX3-201ENST00000258387 SLC51BQ86UW2 128 aa11.77□□□□□ -0.53
PAX3-201ENST00000258387 STPG4Q8N801 248 aa11.77□□□□□ -0.53
PAX3-201ENST00000258387 TNXBP22105 4242 aa11.77□□□□□ -0.53
PAX3-201ENST00000258387 GVQW2A0A096LPI5 108 aaPredicted RBP11.76□□□□□ -0.53
PAX3-201ENST00000258387 H7C423 109 aa11.76□□□□□ -0.53
PAX3-201ENST00000258387 FOXI1Q12951 378 aa11.76□□□□□ -0.53
PAX3-201ENST00000258387 TEX261Q6UWH6 196 aa11.76□□□□□ -0.53
PAX3-201ENST00000258387 I3L3M4 83 aa11.75□□□□□ -0.53
PAX3-201ENST00000258387 GATCO43716 136 aaKnown RBP11.75□□□□□ -0.53
PAX3-201ENST00000258387 LINC00526Q96FQ7 95 aa11.75□□□□□ -0.53
PAX3-201ENST00000258387 BTF3L4Q96K17 158 aa11.75□□□□□ -0.53
PAX3-201ENST00000258387 A0A096LNI7 61 aa11.74□□□□□ -0.53
PAX3-201ENST00000258387 FAM231BA6NCW3 169 aa11.74□□□□□ -0.53
PAX3-201ENST00000258387 OR5A1Q8NGJ0 315 aa11.74□□□□□ -0.53
PAX3-201ENST00000258387 TMEM101Q96IK0 257 aa11.74□□□□□ -0.53
PAX3-201ENST00000258387 CCL25O15444 150 aa11.73□□□□□ -0.53
PAX3-201ENST00000258387 GAS8-AS1O95177 125 aa11.73□□□□□ -0.53
PAX3-201ENST00000258387 CEBPGP53567 150 aa11.73□□□□□ -0.53
PAX3-201ENST00000258387 LINC00959A0A1B0GUT2 108 aa11.72□□□□□ -0.53
PAX3-201ENST00000258387 A8MWL6 223 aa11.72□□□□□ -0.53
PAX3-201ENST00000258387 ZNF25P17030 456 aaPredicted RBP11.72□□□□□ -0.53
PAX3-201ENST00000258387 PRR3P79522 188 aaKnown RBP11.72□□□□□ -0.53
PAX3-201ENST00000258387 TCTE3Q8IZS6 198 aa11.72□□□□□ -0.53
PAX3-201ENST00000258387 ST20Q9HBF5 79 aa11.71□□□□□ -0.53
PAX3-201ENST00000258387 TMEM242Q9NWH2 141 aa11.71□□□□□ -0.53
PAX3-201ENST00000258387 IGHV1-58A0A0C4DH39 117 aa11.7□□□□□ -0.54
PAX3-201ENST00000258387 TRBV6-5A0A0K0K1A5 114 aa11.7□□□□□ -0.54
PAX3-201ENST00000258387 TSHBP01222 138 aa11.7□□□□□ -0.54
PAX3-201ENST00000258387 BORCS7Q96B45 105 aa11.7□□□□□ -0.54
PAX3-201ENST00000258387 ESDP10768 282 aa11.69□□□□□ -0.54
PAX3-201ENST00000258387 ODF1Q14990 250 aa11.69□□□□□ -0.54
PAX3-201ENST00000258387 SS18Q15532 418 aa11.69□□□□□ -0.54
PAX3-201ENST00000258387 FAM231DQ6ZW35 169 aa11.69□□□□□ -0.54
PAX3-201ENST00000258387 MRAP2Q96G30 205 aa11.69□□□□□ -0.54
PAX3-201ENST00000258387 CARD19Q96LW7 228 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms