RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 VCX2Q9H322 139 aa12□□□□□ -0.49
UBQLN1-201ENST00000257468 EDA2RQ9HAV5 297 aa12□□□□□ -0.49
UBQLN1-201ENST00000257468 IGHV3-38A0A0C4DH36 116 aa11.99□□□□□ -0.49
UBQLN1-201ENST00000257468 ZNF22P17026 224 aaPredicted RBP11.99□□□□□ -0.49
UBQLN1-201ENST00000257468 KRTAP1-1Q07627 177 aa11.99□□□□□ -0.49
UBQLN1-201ENST00000257468 TMEM223A0PJW6 202 aa11.99□□□□□ -0.49
UBQLN1-201ENST00000257468 K7ERU9 68 aa11.99□□□□□ -0.49
UBQLN1-201ENST00000257468 FHL3Q13643 280 aa11.99□□□□□ -0.49
UBQLN1-201ENST00000257468 H3BMG7 143 aa11.98□□□□□ -0.49
UBQLN1-201ENST00000257468 MTURNQ8N3F0 131 aa11.98□□□□□ -0.49
UBQLN1-201ENST00000257468 PGPEP1Q9NXJ5 209 aa11.98□□□□□ -0.49
UBQLN1-201ENST00000257468 RHODO00212 210 aa11.98□□□□□ -0.49
UBQLN1-201ENST00000257468 SFTA2Q6UW10 78 aa11.98□□□□□ -0.49
UBQLN1-201ENST00000257468 STHQ8IWL8 128 aa11.98□□□□□ -0.49
UBQLN1-201ENST00000257468 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.97□□□□□ -0.49
UBQLN1-201ENST00000257468 IGKV2-29A2NJV5 120 aaPredicted RBP11.97□□□□□ -0.49
UBQLN1-201ENST00000257468 LGALS3P17931 250 aaKnown RBP11.97□□□□□ -0.49
UBQLN1-201ENST00000257468 PCP4P48539 62 aa11.97□□□□□ -0.49
UBQLN1-201ENST00000257468 SETXQ7Z333 2677 aaKnown RBP11.97□□□□□ -0.49
UBQLN1-201ENST00000257468 APOMO95445 188 aa11.97□□□□□ -0.49
UBQLN1-201ENST00000257468 C1orf158Q8N1D5 194 aa11.97□□□□□ -0.49
UBQLN1-201ENST00000257468 CHCHD7Q9BUK0 85 aa11.97□□□□□ -0.49
UBQLN1-201ENST00000257468 YAE1D1Q9NRH1 226 aa11.97□□□□□ -0.49
UBQLN1-201ENST00000257468 ITPR2Q14571 2701 aa11.97□□□□□ -0.49
UBQLN1-201ENST00000257468 UBE2D1P51668 147 aa11.96□□□□□ -0.49
UBQLN1-201ENST00000257468 MTORP42345 2549 aa11.95□□□□□ -0.5
UBQLN1-201ENST00000257468 LEPROTO15243 131 aa11.95□□□□□ -0.5
UBQLN1-201ENST00000257468 IGHV3-30P01768 117 aa11.95□□□□□ -0.5
UBQLN1-201ENST00000257468 IGHV3-30-5P0DP03 117 aa11.95□□□□□ -0.5
UBQLN1-201ENST00000257468 TEX29Q8N6K0 151 aa11.95□□□□□ -0.5
UBQLN1-201ENST00000257468 SLC25A29Q8N8R3 303 aa11.95□□□□□ -0.5
UBQLN1-201ENST00000257468 LINC01006Q8NI28 216 aa11.95□□□□□ -0.5
UBQLN1-201ENST00000257468 LINC00467Q9BRT7 94 aa11.95□□□□□ -0.5
UBQLN1-201ENST00000257468 TMEM238LA0A1B0GVL6 79 aa11.94□□□□□ -0.5
UBQLN1-201ENST00000257468 A6NJY4 79 aa11.94□□□□□ -0.5
UBQLN1-201ENST00000257468 IGHV3-53P01767 116 aa11.94□□□□□ -0.5
UBQLN1-201ENST00000257468 BEAN1Q3B7T3 259 aa11.94□□□□□ -0.5
UBQLN1-201ENST00000257468 PIK3CD-AS1Q5SR53 167 aa11.94□□□□□ -0.5
UBQLN1-201ENST00000257468 SPXQ9BT56 116 aa11.94□□□□□ -0.5
UBQLN1-201ENST00000257468 WFDC10AQ9H1F0 79 aa11.94□□□□□ -0.5
UBQLN1-201ENST00000257468 PYGO1Q9Y3Y4 419 aa11.94□□□□□ -0.5
UBQLN1-201ENST00000257468 RPL24P83731 157 aaKnown RBP11.94□□□□□ -0.5
UBQLN1-201ENST00000257468 WFDC2Q14508 124 aa11.94□□□□□ -0.5
UBQLN1-201ENST00000257468 ANK3Q12955 4377 aaKnown RBP11.93□□□□□ -0.5
UBQLN1-201ENST00000257468 ADARB2-AS1A8MUL3 147 aa11.93□□□□□ -0.5
UBQLN1-201ENST00000257468 RS1O15537 224 aa11.93□□□□□ -0.5
UBQLN1-201ENST00000257468 PTH2Q96A98 100 aa11.93□□□□□ -0.5
UBQLN1-201ENST00000257468 UBE2D4Q9Y2X8 147 aa11.93□□□□□ -0.5
UBQLN1-201ENST00000257468 JMJD1CQ15652 2540 aa11.93□□□□□ -0.5
UBQLN1-201ENST00000257468 TRGV1A0A0A0MS02 117 aa11.93□□□□□ -0.5
UBQLN1-201ENST00000257468 TRAV8-3A0A0A6YYJ7 113 aa11.93□□□□□ -0.5
UBQLN1-201ENST00000257468 TRAV25A0A0B4J276 109 aa11.93□□□□□ -0.5
UBQLN1-201ENST00000257468 TSPAN13O95857 204 aa11.93□□□□□ -0.5
UBQLN1-201ENST00000257468 SPANXB1Q9NS25 103 aaPredicted RBP11.93□□□□□ -0.5
UBQLN1-201ENST00000257468 TEX48A0A1B0GUV7 120 aa11.92□□□□□ -0.5
UBQLN1-201ENST00000257468 G3V4G9 280 aa11.92□□□□□ -0.5
UBQLN1-201ENST00000257468 Q6ZUT4 128 aa11.92□□□□□ -0.5
UBQLN1-201ENST00000257468 CFC1BP0CG36 223 aa11.91□□□□□ -0.5
UBQLN1-201ENST00000257468 CFC1P0CG37 223 aa11.91□□□□□ -0.5
UBQLN1-201ENST00000257468 MRPS36P82909 103 aaKnown RBP11.91□□□□□ -0.5
UBQLN1-201ENST00000257468 NDUFA11Q86Y39 141 aa11.91□□□□□ -0.5
UBQLN1-201ENST00000257468 C10orf126Q8N4M7 172 aa11.91□□□□□ -0.5
UBQLN1-201ENST00000257468 TSSC4Q9Y5U2 329 aaPredicted RBP11.91□□□□□ -0.5
UBQLN1-201ENST00000257468 CLUHP3Q96NS8 147 aa11.9□□□□□ -0.5
UBQLN1-201ENST00000257468 IGHV3-30-3P0DP02 117 aa11.9□□□□□ -0.5
UBQLN1-201ENST00000257468 Q6ZTI0 123 aa11.9□□□□□ -0.5
UBQLN1-201ENST00000257468 LOC107984156A0A0G2JMH3 177 aa11.89□□□□□ -0.51
UBQLN1-201ENST00000257468 A8MZ25 164 aa11.89□□□□□ -0.51
UBQLN1-201ENST00000257468 COTL1Q14019 142 aa11.89□□□□□ -0.51
UBQLN1-201ENST00000257468 ARL17AQ8IVW1 177 aa11.89□□□□□ -0.51
UBQLN1-201ENST00000257468 IL17DQ8TAD2 202 aa11.89□□□□□ -0.51
UBQLN1-201ENST00000257468 TIMM21Q9BVV7 248 aa11.89□□□□□ -0.51
UBQLN1-201ENST00000257468 NOTCH3Q9UM47 2321 aa11.89□□□□□ -0.51
UBQLN1-201ENST00000257468 RNASE1P07998 156 aaKnown RBP11.89□□□□□ -0.51
UBQLN1-201ENST00000257468 SH2D6Q7Z4S9 175 aa11.89□□□□□ -0.51
UBQLN1-201ENST00000257468 PRO0461Q9UI25 63 aa11.88□□□□□ -0.51
UBQLN1-201ENST00000257468 F8W1H4 67 aa11.88□□□□□ -0.51
UBQLN1-201ENST00000257468 EIF4EBP3O60516 100 aaPredicted RBP11.88□□□□□ -0.51
UBQLN1-201ENST00000257468 GIG44P09565 113 aaPredicted RBP11.88□□□□□ -0.51
UBQLN1-201ENST00000257468 GAGE13Q4V321 117 aa11.88□□□□□ -0.51
UBQLN1-201ENST00000257468 DNAJC30Q96LL9 226 aa11.88□□□□□ -0.51
UBQLN1-201ENST00000257468 SPANXA1Q9NS26 97 aa11.88□□□□□ -0.51
UBQLN1-201ENST00000257468 SPINK8P0C7L1 97 aa11.87□□□□□ -0.51
UBQLN1-201ENST00000257468 ETDBQ3ZM63 59 aa11.87□□□□□ -0.51
UBQLN1-201ENST00000257468 HELZ2Q9BYK8 2649 aaKnown RBP11.87□□□□□ -0.51
UBQLN1-201ENST00000257468 A0A0J9YXY3 114 aa11.86□□□□□ -0.51
UBQLN1-201ENST00000257468 A4D1N5 150 aa11.86□□□□□ -0.51
UBQLN1-201ENST00000257468 RPL35AP18077 110 aaKnown RBP11.86□□□□□ -0.51
UBQLN1-201ENST00000257468 SMR3AQ99954 134 aa11.86□□□□□ -0.51
UBQLN1-201ENST00000257468 MUSTN1Q8IVN3 82 aa11.86□□□□□ -0.51
UBQLN1-201ENST00000257468 PSMB2P49721 201 aa11.85□□□□□ -0.51
UBQLN1-201ENST00000257468 CRYBA4P53673 196 aa11.85□□□□□ -0.51
UBQLN1-201ENST00000257468 C16orf95Q9H693 158 aa11.85□□□□□ -0.51
UBQLN1-201ENST00000257468 NOP10Q9NPE3 64 aaKnown RBP11.85□□□□□ -0.51
UBQLN1-201ENST00000257468 TINCRA0A1B0GVN0 87 aa11.85□□□□□ -0.51
UBQLN1-201ENST00000257468 UNC79Q9P2D8 2635 aa11.85□□□□□ -0.51
UBQLN1-201ENST00000257468 LINC00694P0DN24 101 aa11.84□□□□□ -0.51
UBQLN1-201ENST00000257468 UBE2D3P61077 147 aa11.84□□□□□ -0.51
UBQLN1-201ENST00000257468 UBE2D2P62837 147 aa11.84□□□□□ -0.51
UBQLN1-201ENST00000257468 TMEM263Q8WUH6 116 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms