RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 KIAA1549LQ6ZVL6 1849 aa14.07□□□□□ -0.16
SMARCC1-201ENST00000254480 LINC00467Q9BRT7 94 aa14.07□□□□□ -0.16
SMARCC1-201ENST00000254480 MED14OSP0DP75 135 aa14.07□□□□□ -0.16
SMARCC1-201ENST00000254480 FAM236AA0A1B0GUQ0 79 aa14.06□□□□□ -0.16
SMARCC1-201ENST00000254480 FAM236BA0A1B0GV22 79 aa14.06□□□□□ -0.16
SMARCC1-201ENST00000254480 H0Y9J4 135 aa14.06□□□□□ -0.16
SMARCC1-201ENST00000254480 ABCA2Q9BZC7 2435 aa14.06□□□□□ -0.16
SMARCC1-201ENST00000254480 REG3AQ06141 175 aa14.06□□□□□ -0.16
SMARCC1-201ENST00000254480 IGLV2-8P01709 118 aa14.06□□□□□ -0.16
SMARCC1-201ENST00000254480 A0A0B4J2C4 111 aa14.05□□□□□ -0.16
SMARCC1-201ENST00000254480 TAX1BP3O14907 124 aa14.05□□□□□ -0.16
SMARCC1-201ENST00000254480 PRM2P04554 102 aa14.05□□□□□ -0.16
SMARCC1-201ENST00000254480 DEFB114Q30KQ6 69 aa14.05□□□□□ -0.16
SMARCC1-201ENST00000254480 P0C879 139 aa14.05□□□□□ -0.16
SMARCC1-201ENST00000254480 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.05□□□□□ -0.16
SMARCC1-201ENST00000254480 CRIP3Q6Q6R5 217 aa14.05□□□□□ -0.16
SMARCC1-201ENST00000254480 NDUFA11Q86Y39 141 aa14.05□□□□□ -0.16
SMARCC1-201ENST00000254480 PSMB8P28062 276 aa14.04□□□□□ -0.16
SMARCC1-201ENST00000254480 C18orf65Q6ZTR6 163 aa14.04□□□□□ -0.16
SMARCC1-201ENST00000254480 CCDC168Q8NDH2 2452 aa14.04□□□□□ -0.16
SMARCC1-201ENST00000254480 WFDC10AQ9H1F0 79 aa14.04□□□□□ -0.16
SMARCC1-201ENST00000254480 INSL3P51460 131 aa14.04□□□□□ -0.16
SMARCC1-201ENST00000254480 ZNF843Q8N446 348 aa14.04□□□□□ -0.16
SMARCC1-201ENST00000254480 RNF183Q96D59 192 aa14.04□□□□□ -0.16
SMARCC1-201ENST00000254480 ZNF295-AS1Q8N0V1 137 aa14.03□□□□□ -0.16
SMARCC1-201ENST00000254480 ZFAND2AQ8N6M9 145 aa14.03□□□□□ -0.16
SMARCC1-201ENST00000254480 Q6ZSV7 163 aa14.03□□□□□ -0.16
SMARCC1-201ENST00000254480 DEFB131BA0A096LNP1 70 aa14.03□□□□□ -0.16
SMARCC1-201ENST00000254480 TEN1Q86WV5 123 aa14.02□□□□□ -0.17
SMARCC1-201ENST00000254480 CRYGDP07320 174 aa14.02□□□□□ -0.17
SMARCC1-201ENST00000254480 PKIGQ9Y2B9 76 aa14.01□□□□□ -0.17
SMARCC1-201ENST00000254480 K7EQG2 157 aa14.01□□□□□ -0.17
SMARCC1-201ENST00000254480 PIEZO2Q9H5I5 2752 aa14.01□□□□□ -0.17
SMARCC1-201ENST00000254480 CXCL5P42830 114 aa14.01□□□□□ -0.17
SMARCC1-201ENST00000254480 CHCHD10Q8WYQ3 142 aaPredicted RBP14.01□□□□□ -0.17
SMARCC1-201ENST00000254480 Q8N976 141 aa14□□□□□ -0.17
SMARCC1-201ENST00000254480 SLPIP03973 132 aa14□□□□□ -0.17
SMARCC1-201ENST00000254480 ACYP1P07311 99 aa14□□□□□ -0.17
SMARCC1-201ENST00000254480 CDKN2A-AS1Q9UH64 79 aa14□□□□□ -0.17
SMARCC1-201ENST00000254480 IGLV2-18A0A075B6J9 118 aa14□□□□□ -0.17
SMARCC1-201ENST00000254480 Q6ZS46 218 aa14□□□□□ -0.17
SMARCC1-201ENST00000254480 RNASE8Q8TDE3 154 aaKnown RBP14□□□□□ -0.17
SMARCC1-201ENST00000254480 LINC00526Q96FQ7 95 aa14□□□□□ -0.17
SMARCC1-201ENST00000254480 TRBV10-1A0A0K0K1A3 114 aa13.99□□□□□ -0.17
SMARCC1-201ENST00000254480 COX7BP24311 80 aa13.99□□□□□ -0.17
SMARCC1-201ENST00000254480 XAGE1AQ9HD64 81 aa13.99□□□□□ -0.17
SMARCC1-201ENST00000254480 LY6G6DO95868 133 aa13.99□□□□□ -0.17
SMARCC1-201ENST00000254480 HIGD1BQ9P298 99 aa13.99□□□□□ -0.17
SMARCC1-201ENST00000254480 A0A0J9YXY3 114 aa13.98□□□□□ -0.17
SMARCC1-201ENST00000254480 ALPK3Q96L96 1907 aa13.98□□□□□ -0.17
SMARCC1-201ENST00000254480 TRBV10-2A0A0K0K1G8 114 aa13.98□□□□□ -0.17
SMARCC1-201ENST00000254480 A0A1B0GXF2 115 aa13.98□□□□□ -0.17
SMARCC1-201ENST00000254480 MP68P56378 58 aa13.98□□□□□ -0.17
SMARCC1-201ENST00000254480 NEXN-AS1Q8NBZ9 246 aa13.98□□□□□ -0.17
SMARCC1-201ENST00000254480 DCANP1Q8TF63 244 aa13.98□□□□□ -0.17
SMARCC1-201ENST00000254480 FOXI1Q12951 378 aa13.97□□□□□ -0.17
SMARCC1-201ENST00000254480 M0R2N4 97 aa13.97□□□□□ -0.17
SMARCC1-201ENST00000254480 CRIP1P50238 77 aa13.97□□□□□ -0.17
SMARCC1-201ENST00000254480 TMEM258P61165 79 aa13.97□□□□□ -0.17
SMARCC1-201ENST00000254480 PIK3CD-AS1Q5SR53 167 aa13.97□□□□□ -0.17
SMARCC1-201ENST00000254480 TCL1BO95988 128 aa13.97□□□□□ -0.17
SMARCC1-201ENST00000254480 A0A087WZ39 114 aa13.97□□□□□ -0.17
SMARCC1-201ENST00000254480 A8MZ25 164 aa13.96□□□□□ -0.17
SMARCC1-201ENST00000254480 SCXQ7RTU7 201 aa13.96□□□□□ -0.17
SMARCC1-201ENST00000254480 CRYGBP07316 175 aa13.96□□□□□ -0.17
SMARCC1-201ENST00000254480 MIAQ16674 131 aa13.96□□□□□ -0.17
SMARCC1-201ENST00000254480 ARHGAP32A7KAX9 2087 aa13.96□□□□□ -0.17
SMARCC1-201ENST00000254480 NUP210LQ5VU65 1888 aa13.96□□□□□ -0.17
SMARCC1-201ENST00000254480 LTBP2Q14767 1821 aa13.96□□□□□ -0.17
SMARCC1-201ENST00000254480 FAM19A5Q7Z5A7 132 aaPredicted RBP13.96□□□□□ -0.17
SMARCC1-201ENST00000254480 CDSNQ15517 529 aa13.96□□□□□ -0.18
SMARCC1-201ENST00000254480 SPATA12Q7Z6I5 190 aa13.96□□□□□ -0.18
SMARCC1-201ENST00000254480 LINC00574Q9H8X3 128 aa13.95□□□□□ -0.18
SMARCC1-201ENST00000254480 IGLC6P0CF74 106 aa13.95□□□□□ -0.18
SMARCC1-201ENST00000254480 LRRC75A-AS1Q8N1F1 130 aa13.95□□□□□ -0.18
SMARCC1-201ENST00000254480 B9D2Q9BPU9 175 aa13.95□□□□□ -0.18
SMARCC1-201ENST00000254480 ZFAND3Q9H8U3 227 aa13.95□□□□□ -0.18
SMARCC1-201ENST00000254480 FAM19A1Q7Z5A9 133 aa13.95□□□□□ -0.18
SMARCC1-201ENST00000254480 BBC3Q96PG8 261 aaPredicted RBP13.94□□□□□ -0.18
SMARCC1-201ENST00000254480 CFAP126Q5VTH2 177 aa13.94□□□□□ -0.18
SMARCC1-201ENST00000254480 LOC100131303A0A0U1RQF7 123 aa13.93□□□□□ -0.18
SMARCC1-201ENST00000254480 TMEM256-PLSCR3K7ERE1 68 aa13.93□□□□□ -0.18
SMARCC1-201ENST00000254480 JMJD7-PLA2G4BH0Y9G9 81 aa13.93□□□□□ -0.18
SMARCC1-201ENST00000254480 LY6LH3BQJ8 138 aa13.93□□□□□ -0.18
SMARCC1-201ENST00000254480 C11orf71Q6IPW1 123 aa13.93□□□□□ -0.18
SMARCC1-201ENST00000254480 NCOR2Q9Y618 2525 aa13.92□□□□□ -0.18
SMARCC1-201ENST00000254480 TRAV23DV6A0A075B6W5 121 aa13.92□□□□□ -0.18
SMARCC1-201ENST00000254480 SMR3AQ99954 134 aa13.92□□□□□ -0.18
SMARCC1-201ENST00000254480 EIF4EBP1Q13541 118 aaPredicted RBP13.92□□□□□ -0.18
SMARCC1-201ENST00000254480 HILS1P60008 231 aa13.92□□□□□ -0.18
SMARCC1-201ENST00000254480 MLST8Q9BVC4 326 aa13.92□□□□□ -0.18
SMARCC1-201ENST00000254480 IGLV4-3A0A075B6K6 122 aa13.91□□□□□ -0.18
SMARCC1-201ENST00000254480 IGF2RP11717 2491 aa13.91□□□□□ -0.18
SMARCC1-201ENST00000254480 PRRC2AP48634 2157 aaKnown RBP13.9□□□□□ -0.18
SMARCC1-201ENST00000254480 IGKV4-1P06312 121 aa13.9□□□□□ -0.18
SMARCC1-201ENST00000254480 SPANXDQ9BXN6 97 aa13.9□□□□□ -0.18
SMARCC1-201ENST00000254480 DOPEY1Q5JWR5 2465 aa13.9□□□□□ -0.18
SMARCC1-201ENST00000254480 NAV2Q8IVL1 2488 aa13.9□□□□□ -0.18
SMARCC1-201ENST00000254480 SMIM20Q8N5G0 67 aa13.9□□□□□ -0.18
SMARCC1-201ENST00000254480 UFSP1Q6NVU6 142 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms