RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 ARPC5O15511 151 aa6.64□□□□□ -1.35
VPS50-201ENST00000251739 PAGE4O60829 102 aa6.64□□□□□ -1.35
VPS50-201ENST00000251739 CRPP02741 224 aa6.64□□□□□ -1.35
VPS50-201ENST00000251739 PRSS1P07477 247 aa6.64□□□□□ -1.35
VPS50-201ENST00000251739 HNRNPA3P51991 378 aaKnown RBP6.64□□□□□ -1.35
VPS50-201ENST00000251739 PKIAP61925 76 aa6.64□□□□□ -1.35
VPS50-201ENST00000251739 ZNF56Q15929 161 aa6.64□□□□□ -1.35
VPS50-201ENST00000251739 KCNIP4Q6PIL6 250 aa6.64□□□□□ -1.35
VPS50-201ENST00000251739 UQCC3Q6UW78 93 aa6.64□□□□□ -1.35
VPS50-201ENST00000251739 STOML3Q8TAV4 291 aa6.64□□□□□ -1.35
VPS50-201ENST00000251739 MBD3L1Q8WWY6 194 aa6.64□□□□□ -1.35
VPS50-201ENST00000251739 C2orf88Q9BSF0 95 aa6.64□□□□□ -1.35
VPS50-201ENST00000251739 ZNF471Q9BX82 626 aaPredicted RBP6.64□□□□□ -1.35
VPS50-201ENST00000251739 ANGP03950 147 aaKnown RBP6.63□□□□□ -1.35
VPS50-201ENST00000251739 LINC00614P0C842 121 aa6.63□□□□□ -1.35
VPS50-201ENST00000251739 ZNF345Q14585 488 aa6.63□□□□□ -1.35
VPS50-201ENST00000251739 DGAT2L7PQ6IED9 249 aa6.63□□□□□ -1.35
VPS50-201ENST00000251739 C9orf163Q8N9P6 203 aa6.63□□□□□ -1.35
VPS50-201ENST00000251739 TNXBP22105 4242 aa6.62□□□□□ -1.35
VPS50-201ENST00000251739 TMEM262E9PQX1 116 aa6.62□□□□□ -1.35
VPS50-201ENST00000251739 TSTD3H0UI37 97 aa6.62□□□□□ -1.35
VPS50-201ENST00000251739 PANO1I0J062 215 aa6.62□□□□□ -1.35
VPS50-201ENST00000251739 TCAPO15273 167 aa6.62□□□□□ -1.35
VPS50-201ENST00000251739 SCO1O75880 301 aa6.62□□□□□ -1.35
VPS50-201ENST00000251739 HLA-DQA1P01909 254 aa6.62□□□□□ -1.35
VPS50-201ENST00000251739 RAB5CP51148 216 aa6.62□□□□□ -1.35
VPS50-201ENST00000251739 RBX1P62877 108 aa6.62□□□□□ -1.35
VPS50-201ENST00000251739 CIRBPQ14011 172 aaKnown RBP6.62□□□□□ -1.35
VPS50-201ENST00000251739 IQCJQ1A5X6 159 aa6.62□□□□□ -1.35
VPS50-201ENST00000251739 TMEM97Q5BJF2 176 aa6.62□□□□□ -1.35
VPS50-201ENST00000251739 SVBPQ8N300 66 aa6.62□□□□□ -1.35
VPS50-201ENST00000251739 C9orf62Q8N4C0 152 aa6.62□□□□□ -1.35
VPS50-201ENST00000251739 KCNRGQ8N5I3 272 aa6.62□□□□□ -1.35
VPS50-201ENST00000251739 DAZAP1Q96EP5 407 aaKnown RBP6.62□□□□□ -1.35
VPS50-201ENST00000251739 CHCHD5Q9BSY4 110 aa6.62□□□□□ -1.35
VPS50-201ENST00000251739 MUC21A0A0G2JKD1 596 aa6.61□□□□□ -1.35
VPS50-201ENST00000251739 MUC21A0A140T8X8 626 aa6.61□□□□□ -1.35
VPS50-201ENST00000251739 UMAD1C9J7I0 102 aa6.61□□□□□ -1.35
VPS50-201ENST00000251739 RPL37AP61513 92 aaKnown RBP6.61□□□□□ -1.35
VPS50-201ENST00000251739 SMIM15Q7Z3B0 74 aa6.61□□□□□ -1.35
VPS50-201ENST00000251739 BAGE2Q86Y30 109 aa6.61□□□□□ -1.35
VPS50-201ENST00000251739 AP1S3Q96PC3 154 aa6.61□□□□□ -1.35
VPS50-201ENST00000251739 C1orf196B1AJZ1 125 aa6.6□□□□□ -1.35
VPS50-201ENST00000251739 SMLR1H3BR10 107 aa6.6□□□□□ -1.35
VPS50-201ENST00000251739 M0QY20 66 aa6.6□□□□□ -1.35
VPS50-201ENST00000251739 IGLC6P0CF74 106 aa6.6□□□□□ -1.35
VPS50-201ENST00000251739 CEBPGP53567 150 aa6.6□□□□□ -1.35
VPS50-201ENST00000251739 CNBPP62633 177 aaKnown RBP6.6□□□□□ -1.35
VPS50-201ENST00000251739 SPANXN1Q5VSR9 72 aa6.6□□□□□ -1.35
VPS50-201ENST00000251739 SDIM1Q6ZPB5 146 aa6.6□□□□□ -1.35
VPS50-201ENST00000251739 MRPL52Q86TS9 123 aaKnown RBP6.6□□□□□ -1.35
VPS50-201ENST00000251739 LINC00269Q8N2A0 174 aa6.6□□□□□ -1.35
VPS50-201ENST00000251739 FAM213BQ8TBF2 198 aa6.6□□□□□ -1.35
VPS50-201ENST00000251739 C11orf52Q96A22 123 aa6.6□□□□□ -1.35
VPS50-201ENST00000251739 TRBV25-1A0A075B6N4 114 aa6.59□□□□□ -1.35
VPS50-201ENST00000251739 NDUFS6O75380 124 aaKnown RBP6.59□□□□□ -1.35
VPS50-201ENST00000251739 MT1HL1P0DM35 61 aa6.59□□□□□ -1.35
VPS50-201ENST00000251739 EIF5AP63241 154 aaKnown RBP6.59□□□□□ -1.35
VPS50-201ENST00000251739 GAGE6Q13070 117 aa6.59□□□□□ -1.35
VPS50-201ENST00000251739 CLPSL2Q6UWE3 100 aa6.59□□□□□ -1.35
VPS50-201ENST00000251739 DERL1Q9BUN8 251 aa6.59□□□□□ -1.35
VPS50-201ENST00000251739 A0A1B0GV50 99 aa6.58□□□□□ -1.36
VPS50-201ENST00000251739 HMSDA8MTL9 139 aa6.58□□□□□ -1.36
VPS50-201ENST00000251739 F5H697 171 aa6.58□□□□□ -1.36
VPS50-201ENST00000251739 REG3AQ06141 175 aa6.58□□□□□ -1.36
VPS50-201ENST00000251739 TMUB2Q71RG4 321 aa6.58□□□□□ -1.36
VPS50-201ENST00000251739 C20orf203Q8NBC4 194 aa6.58□□□□□ -1.36
VPS50-201ENST00000251739 GFRA4Q9GZZ7 299 aa6.58□□□□□ -1.36
VPS50-201ENST00000251739 TRAV1-1A0A0B4J248 108 aa6.57□□□□□ -1.36
VPS50-201ENST00000251739 IGHV1-24A0A0C4DH33 117 aa6.57□□□□□ -1.36
VPS50-201ENST00000251739 A0A1B0GUV1 79 aa6.57□□□□□ -1.36
VPS50-201ENST00000251739 TMEM218A2RU14 115 aa6.57□□□□□ -1.36
VPS50-201ENST00000251739 C19orf71A6NCJ1 209 aa6.57□□□□□ -1.36
VPS50-201ENST00000251739 BCL2L11O43521 198 aa6.57□□□□□ -1.36
VPS50-201ENST00000251739 APOC3P02656 99 aa6.57□□□□□ -1.36
VPS50-201ENST00000251739 SMIM17P0DL12 118 aa6.57□□□□□ -1.36
VPS50-201ENST00000251739 GZMBP10144 247 aa6.57□□□□□ -1.36
VPS50-201ENST00000251739 S100A2P29034 98 aa6.57□□□□□ -1.36
VPS50-201ENST00000251739 SUMO4Q6EEV6 95 aa6.57□□□□□ -1.36
VPS50-201ENST00000251739 KRTAP9-3Q9BYQ3 159 aa6.57□□□□□ -1.36
VPS50-201ENST00000251739 IGLV4-60A0A075B6I1 120 aa6.56□□□□□ -1.36
VPS50-201ENST00000251739 IGLV10-54A0A075B6I4 117 aa6.56□□□□□ -1.36
VPS50-201ENST00000251739 TRAV8-4A0A0B4J246 113 aa6.56□□□□□ -1.36
VPS50-201ENST00000251739 KRTAP23-1A1A580 65 aa6.56□□□□□ -1.36
VPS50-201ENST00000251739 H7C1H1 209 aa6.56□□□□□ -1.36
VPS50-201ENST00000251739 P01737 135 aa6.56□□□□□ -1.36
VPS50-201ENST00000251739 SLPIP03973 132 aa6.56□□□□□ -1.36
VPS50-201ENST00000251739 CCL20P78556 96 aa6.56□□□□□ -1.36
VPS50-201ENST00000251739 CENPWQ5EE01 88 aa6.56□□□□□ -1.36
VPS50-201ENST00000251739 EIF5AL1Q6IS14 154 aaKnown RBP6.56□□□□□ -1.36
VPS50-201ENST00000251739 FER1L6-AS1Q8NA97 138 aa6.56□□□□□ -1.36
VPS50-201ENST00000251739 PGLYRP4Q96LB8 373 aa6.56□□□□□ -1.36
VPS50-201ENST00000251739 MANBALQ9NQG1 85 aa6.56□□□□□ -1.36
VPS50-201ENST00000251739 LRP2P98164 4655 aa6.55□□□□□ -1.36
VPS50-201ENST00000251739 TRBV20OR9-2A0A075B6H5 130 aa6.55□□□□□ -1.36
VPS50-201ENST00000251739 A0A0D9SG52 128 aa6.55□□□□□ -1.36
VPS50-201ENST00000251739 RPS20P60866 119 aaKnown RBP6.55□□□□□ -1.36
VPS50-201ENST00000251739 CACNG7P62955 275 aa6.55□□□□□ -1.36
VPS50-201ENST00000251739 SMIM12Q96EX1 92 aa6.55□□□□□ -1.36
VPS50-201ENST00000251739 TMEM243Q9BU79 118 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms