RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 ZNRF2Q8NHG8 242 aa7.47□□□□□ -1.21
COPB1-201ENST00000249923 PRRC2AP48634 2157 aaKnown RBP7.47□□□□□ -1.21
COPB1-201ENST00000249923 TENM4Q6N022 2769 aa7.47□□□□□ -1.21
COPB1-201ENST00000249923 SETXQ7Z333 2677 aaKnown RBP7.47□□□□□ -1.21
COPB1-201ENST00000249923 TRAV4A0A0B4J268 109 aa7.47□□□□□ -1.21
COPB1-201ENST00000249923 CD28P10747 220 aa7.47□□□□□ -1.21
COPB1-201ENST00000249923 C18orf65Q6ZTR6 163 aa7.47□□□□□ -1.21
COPB1-201ENST00000249923 C15orf53Q8NAA6 179 aa7.47□□□□□ -1.21
COPB1-201ENST00000249923 B4DSR2 109 aa7.46□□□□□ -1.21
COPB1-201ENST00000249923 SMCPP49901 116 aaPredicted RBP7.46□□□□□ -1.21
COPB1-201ENST00000249923 PMVKQ15126 192 aa7.46□□□□□ -1.21
COPB1-201ENST00000249923 CFAP126Q5VTH2 177 aa7.46□□□□□ -1.21
COPB1-201ENST00000249923 CLEC2BQ92478 149 aa7.46□□□□□ -1.21
COPB1-201ENST00000249923 AMELXQ99217 191 aa7.46□□□□□ -1.22
COPB1-201ENST00000249923 K7EQG2 157 aa7.46□□□□□ -1.22
COPB1-201ENST00000249923 COX6CP09669 75 aa7.46□□□□□ -1.22
COPB1-201ENST00000249923 CFC1BP0CG36 223 aa7.46□□□□□ -1.22
COPB1-201ENST00000249923 CFC1P0CG37 223 aa7.46□□□□□ -1.22
COPB1-201ENST00000249923 SYNJ2BPP57105 145 aa7.46□□□□□ -1.22
COPB1-201ENST00000249923 M0QY20 66 aa7.45□□□□□ -1.22
COPB1-201ENST00000249923 LGALS9O00182 355 aa7.45□□□□□ -1.22
COPB1-201ENST00000249923 P0DMU3 169 aa7.45□□□□□ -1.22
COPB1-201ENST00000249923 FAM231AP0DMU4 169 aa7.45□□□□□ -1.22
COPB1-201ENST00000249923 FAM231CP0DMU5 169 aa7.45□□□□□ -1.22
COPB1-201ENST00000249923 TAL2Q16559 108 aa7.45□□□□□ -1.22
COPB1-201ENST00000249923 FAM104AQ969W3 186 aa7.45□□□□□ -1.22
COPB1-201ENST00000249923 SPATA25Q9BR10 227 aa7.45□□□□□ -1.22
COPB1-201ENST00000249923 Q9UF83 564 aa7.45□□□□□ -1.22
COPB1-201ENST00000249923 TRBV27A0A0K0K1C4 114 aa7.45□□□□□ -1.22
COPB1-201ENST00000249923 RPL32P62910 135 aaKnown RBP7.45□□□□□ -1.22
COPB1-201ENST00000249923 FHL3Q13643 280 aa7.45□□□□□ -1.22
COPB1-201ENST00000249923 C10orf126Q8N4M7 172 aa7.45□□□□□ -1.22
COPB1-201ENST00000249923 CDIP1Q9H305 208 aa7.45□□□□□ -1.22
COPB1-201ENST00000249923 PRO0461Q9UI25 63 aa7.45□□□□□ -1.22
COPB1-201ENST00000249923 LINC01619G3V211 115 aa7.44□□□□□ -1.22
COPB1-201ENST00000249923 ITPR3Q14573 2671 aa7.44□□□□□ -1.22
COPB1-201ENST00000249923 CCDC179H3BU77 68 aa7.44□□□□□ -1.22
COPB1-201ENST00000249923 RNASE1P07998 156 aaKnown RBP7.44□□□□□ -1.22
COPB1-201ENST00000249923 GAGE5Q13069 117 aa7.44□□□□□ -1.22
COPB1-201ENST00000249923 GAGE6Q13070 117 aa7.44□□□□□ -1.22
COPB1-201ENST00000249923 CARD19Q96LW7 228 aa7.44□□□□□ -1.22
COPB1-201ENST00000249923 CRLF1O75462 422 aa7.44□□□□□ -1.22
COPB1-201ENST00000249923 A0A0J9YY99 117 aa7.43□□□□□ -1.22
COPB1-201ENST00000249923 TMEM262E9PQX1 116 aa7.43□□□□□ -1.22
COPB1-201ENST00000249923 VCYO14598 125 aa7.43□□□□□ -1.22
COPB1-201ENST00000249923 SCGB1A1P11684 91 aa7.43□□□□□ -1.22
COPB1-201ENST00000249923 HERV-K104P63124 156 aa7.43□□□□□ -1.22
COPB1-201ENST00000249923 MEIG1Q5JSS6 88 aa7.43□□□□□ -1.22
COPB1-201ENST00000249923 ZNF702PQ9H963 129 aa7.43□□□□□ -1.22
COPB1-201ENST00000249923 DEFB136Q30KP8 78 aa7.43□□□□□ -1.22
COPB1-201ENST00000249923 EIF4EBP3O60516 100 aaPredicted RBP7.43□□□□□ -1.22
COPB1-201ENST00000249923 PRB1P04280 392 aa7.43□□□□□ -1.22
COPB1-201ENST00000249923 TOMM7Q9P0U1 55 aa7.43□□□□□ -1.22
COPB1-201ENST00000249923 TRBV6-5A0A0K0K1A5 114 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 RBMY1BA6NDE4 496 aaKnown RBP7.42□□□□□ -1.22
COPB1-201ENST00000249923 RBMY1EA6NEQ0 496 aaKnown RBP7.42□□□□□ -1.22
COPB1-201ENST00000249923 M0R2P5 195 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 RBMY1DP0C7P1 496 aaKnown RBP7.42□□□□□ -1.22
COPB1-201ENST00000249923 HOXD3P31249 432 aaPredicted RBP7.42□□□□□ -1.22
COPB1-201ENST00000249923 PROK1P58294 105 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 C11orf44Q8N8P7 122 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 GAGE12JA6NER3 117 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 GAGE7O76087 117 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 FSHBP01225 129 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 GAGE12FP0CL80 117 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 GAGE12GP0CL81 117 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 GAGE12IP0CL82 117 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 IFITM1P13164 125 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 ID1P41134 155 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 UBE2D1P51668 147 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 KRTAP10-9P60411 292 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 GAGE4Q13068 117 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 ODF3Q96PU9 254 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 IGHV3-53P01767 116 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 CHCHD5Q9BSY4 110 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 TIMM21Q9BVV7 248 aa7.42□□□□□ -1.22
COPB1-201ENST00000249923 ACANP16112 2415 aa7.41□□□□□ -1.22
COPB1-201ENST00000249923 MRPL23Q16540 153 aaKnown RBP7.41□□□□□ -1.22
COPB1-201ENST00000249923 TIMM17AQ99595 171 aa7.41□□□□□ -1.22
COPB1-201ENST00000249923 TNFRSF18Q9Y5U5 241 aa7.41□□□□□ -1.22
COPB1-201ENST00000249923 ANK3Q12955 4377 aaKnown RBP7.41□□□□□ -1.22
COPB1-201ENST00000249923 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.41□□□□□ -1.22
COPB1-201ENST00000249923 IGKV2-29A2NJV5 120 aaPredicted RBP7.41□□□□□ -1.22
COPB1-201ENST00000249923 H3BMM0 161 aa7.41□□□□□ -1.22
COPB1-201ENST00000249923 PPP1R17O96001 155 aa7.41□□□□□ -1.22
COPB1-201ENST00000249923 ATXN8Q156A1 80 aa7.41□□□□□ -1.22
COPB1-201ENST00000249923 LINC01356Q8N9X3 169 aa7.41□□□□□ -1.22
COPB1-201ENST00000249923 UBE2WQ96B02 151 aa7.41□□□□□ -1.22
COPB1-201ENST00000249923 IGHV1OR15-1A0A075B7D0 117 aa7.4□□□□□ -1.22
COPB1-201ENST00000249923 TRAV13-1A0A0B4J241 112 aa7.4□□□□□ -1.22
COPB1-201ENST00000249923 ELANEP08246 267 aa7.4□□□□□ -1.22
COPB1-201ENST00000249923 SLURP1P55000 103 aa7.4□□□□□ -1.22
COPB1-201ENST00000249923 TCTEX1D4Q5JR98 221 aa7.4□□□□□ -1.22
COPB1-201ENST00000249923 LINC01620Q4KN68 170 aa7.4□□□□□ -1.23
COPB1-201ENST00000249923 C11orf68Q9H3H3 251 aaKnown RBP7.4□□□□□ -1.23
COPB1-201ENST00000249923 VPREB3Q9UKI3 123 aa7.4□□□□□ -1.23
COPB1-201ENST00000249923 NSUN5P1Q3KNT7 163 aa7.39□□□□□ -1.23
COPB1-201ENST00000249923 PAPPA-AS1Q5QFB9 102 aa7.39□□□□□ -1.23
COPB1-201ENST00000249923 Q6ZSN1 163 aa7.39□□□□□ -1.23
COPB1-201ENST00000249923 RNF152Q8N8N0 203 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms