RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 IGLV1-51P01701 117 aa15.65■□□□□ 0.1
CLN6-201ENST00000249806 IGHV3-53P01767 116 aa15.65■□□□□ 0.1
CLN6-201ENST00000249806 TAL2Q16559 108 aa15.65■□□□□ 0.1
CLN6-201ENST00000249806 OTOGQ6ZRI0 2925 aa15.65■□□□□ 0.1
CLN6-201ENST00000249806 TRBV7-3A0A075B6L6 115 aa15.64■□□□□ 0.09
CLN6-201ENST00000249806 RHODO00212 210 aa15.64■□□□□ 0.09
CLN6-201ENST00000249806 IGHV3-38A0A0C4DH36 116 aa15.64■□□□□ 0.09
CLN6-201ENST00000249806 GAGE10A6NGK3 116 aa15.64■□□□□ 0.09
CLN6-201ENST00000249806 LY6G6DO95868 133 aa15.64■□□□□ 0.09
CLN6-201ENST00000249806 HERVK_113P61574 105 aa15.64■□□□□ 0.09
CLN6-201ENST00000249806 FAM104AQ969W3 186 aa15.64■□□□□ 0.09
CLN6-201ENST00000249806 VCX2Q9H322 139 aa15.64■□□□□ 0.09
CLN6-201ENST00000249806 TRGV1A0A0A0MS02 117 aa15.63■□□□□ 0.09
CLN6-201ENST00000249806 NDUFA7O95182 113 aa15.63■□□□□ 0.09
CLN6-201ENST00000249806 GIG44P09565 113 aaPredicted RBP15.63■□□□□ 0.09
CLN6-201ENST00000249806 RNASE8Q8TDE3 154 aaKnown RBP15.63■□□□□ 0.09
CLN6-201ENST00000249806 PHLDA1Q8WV24 401 aaPredicted RBP15.63■□□□□ 0.09
CLN6-201ENST00000249806 TSPEAR-AS2P59090 65 aa15.63■□□□□ 0.09
CLN6-201ENST00000249806 SCGB1D4Q6XE38 83 aa15.63■□□□□ 0.09
CLN6-201ENST00000249806 KRTAP10-3P60369 221 aa15.62■□□□□ 0.09
CLN6-201ENST00000249806 NFE4Q86UQ8 179 aa15.62■□□□□ 0.09
CLN6-201ENST00000249806 IL17DQ8TAD2 202 aa15.62■□□□□ 0.09
CLN6-201ENST00000249806 C19orf73Q9NVV2 129 aa15.62■□□□□ 0.09
CLN6-201ENST00000249806 FN1P02751 2386 aaKnown RBP15.61■□□□□ 0.09
CLN6-201ENST00000249806 A0A0J9YXV3 536 aa15.61■□□□□ 0.09
CLN6-201ENST00000249806 A0A1W2PPM0 123 aa15.61■□□□□ 0.09
CLN6-201ENST00000249806 RPL35AP18077 110 aaKnown RBP15.61■□□□□ 0.09
CLN6-201ENST00000249806 CHCHD7Q9BUK0 85 aa15.61■□□□□ 0.09
CLN6-201ENST00000249806 RNASE13Q5GAN3 156 aaKnown RBP15.6■□□□□ 0.09
CLN6-201ENST00000249806 Q6ZTI0 123 aa15.6■□□□□ 0.09
CLN6-201ENST00000249806 SAMD5Q5TGI4 173 aa15.6■□□□□ 0.09
CLN6-201ENST00000249806 ZNF479Q96JC4 524 aa15.6■□□□□ 0.09
CLN6-201ENST00000249806 PYGO1Q9Y3Y4 419 aa15.6■□□□□ 0.09
CLN6-201ENST00000249806 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.59■□□□□ 0.09
CLN6-201ENST00000249806 IGKV2-29A2NJV5 120 aaPredicted RBP15.59■□□□□ 0.09
CLN6-201ENST00000249806 CMC4P56277 68 aaPredicted RBP15.58■□□□□ 0.08
CLN6-201ENST00000249806 C12orf74Q32Q52 190 aa15.58■□□□□ 0.08
CLN6-201ENST00000249806 TMEM263Q8WUH6 116 aaKnown RBP15.58■□□□□ 0.08
CLN6-201ENST00000249806 DNAJC30Q96LL9 226 aa15.58■□□□□ 0.08
CLN6-201ENST00000249806 GAGE12BA1L429 117 aa15.58■□□□□ 0.08
CLN6-201ENST00000249806 ZNF22P17026 224 aaPredicted RBP15.58■□□□□ 0.08
CLN6-201ENST00000249806 IGHV3-64A0A075B6Q5 118 aa15.57■□□□□ 0.08
CLN6-201ENST00000249806 TMEM223A0PJW6 202 aa15.57■□□□□ 0.08
CLN6-201ENST00000249806 GTF2H5Q6ZYL4 71 aa15.57■□□□□ 0.08
CLN6-201ENST00000249806 AMELXQ99217 191 aa15.57■□□□□ 0.08
CLN6-201ENST00000249806 K7EP34 96 aa15.56■□□□□ 0.08
CLN6-201ENST00000249806 NOP10Q9NPE3 64 aaKnown RBP15.56■□□□□ 0.08
CLN6-201ENST00000249806 J3QQQ9 107 aa15.56■□□□□ 0.08
CLN6-201ENST00000249806 UBE2D4Q9Y2X8 147 aa15.56■□□□□ 0.08
CLN6-201ENST00000249806 A0A0J9YY99 117 aa15.55■□□□□ 0.08
CLN6-201ENST00000249806 SRSF9Q13242 221 aaKnown RBP eCLIP15.55■□□□□ 0.08
CLN6-201ENST00000249806 COTL1Q14019 142 aa15.55■□□□□ 0.08
CLN6-201ENST00000249806 SPCS1Q9Y6A9 102 aa15.55■□□□□ 0.08
CLN6-201ENST00000249806 C2CD3Q4AC94 2353 aa15.55■□□□□ 0.08
CLN6-201ENST00000249806 FAM110AQ9BQ89 295 aa15.55■□□□□ 0.08
CLN6-201ENST00000249806 FABP2P12104 132 aa15.54■□□□□ 0.08
CLN6-201ENST00000249806 VWFP04275 2813 aa15.54■□□□□ 0.08
CLN6-201ENST00000249806 IGLL5B9A064 214 aa15.53■□□□□ 0.08
CLN6-201ENST00000249806 INAFM1C9JVW0 142 aa15.52■□□□□ 0.08
CLN6-201ENST00000249806 LGALS3P17931 250 aaKnown RBP15.52■□□□□ 0.08
CLN6-201ENST00000249806 NSD1Q96L73 2696 aaPredicted RBP15.52■□□□□ 0.08
CLN6-201ENST00000249806 PLAC8L1A1L4L8 177 aa15.52■□□□□ 0.07
CLN6-201ENST00000249806 NDUFA11Q86Y39 141 aa15.52■□□□□ 0.07
CLN6-201ENST00000249806 CSNK1G2-AS1Q8NCQ2 148 aa15.52■□□□□ 0.07
CLN6-201ENST00000249806 LEPROTO15243 131 aa15.51■□□□□ 0.07
CLN6-201ENST00000249806 PF4P02776 101 aa15.51■□□□□ 0.07
CLN6-201ENST00000249806 MRPS36P82909 103 aaKnown RBP15.51■□□□□ 0.07
CLN6-201ENST00000249806 SPANXA1Q9NS26 97 aa15.51■□□□□ 0.07
CLN6-201ENST00000249806 Q6ZUT4 128 aa15.51■□□□□ 0.07
CLN6-201ENST00000249806 A0A1B0GWB2 263 aa15.5■□□□□ 0.07
CLN6-201ENST00000249806 CRYBA4P53673 196 aa15.5■□□□□ 0.07
CLN6-201ENST00000249806 SLC25A29Q8N8R3 303 aa15.5■□□□□ 0.07
CLN6-201ENST00000249806 TRAV4A0A0B4J268 109 aa15.49■□□□□ 0.07
CLN6-201ENST00000249806 DAZ2Q13117 558 aaKnown RBP15.49■□□□□ 0.07
CLN6-201ENST00000249806 K7EQD1 137 aa15.48■□□□□ 0.07
CLN6-201ENST00000249806 GAGE7O76087 117 aa15.48■□□□□ 0.07
CLN6-201ENST00000249806 GAGE12FP0CL80 117 aa15.48■□□□□ 0.07
CLN6-201ENST00000249806 GAGE12GP0CL81 117 aa15.48■□□□□ 0.07
CLN6-201ENST00000249806 GAGE12IP0CL82 117 aa15.48■□□□□ 0.07
CLN6-201ENST00000249806 LINC00482Q8N8I6 264 aa15.48■□□□□ 0.07
CLN6-201ENST00000249806 OR5A1Q8NGJ0 315 aa15.48■□□□□ 0.07
CLN6-201ENST00000249806 C16orf74Q96GX8 76 aa15.48■□□□□ 0.07
CLN6-201ENST00000249806 C1QTNF4Q9BXJ3 329 aa15.47■□□□□ 0.07
CLN6-201ENST00000249806 TRAV8-3A0A0A6YYJ7 113 aa15.47■□□□□ 0.07
CLN6-201ENST00000249806 RPL36AP83881 106 aaKnown RBP15.47■□□□□ 0.07
CLN6-201ENST00000249806 RPL36ALQ969Q0 106 aaKnown RBP15.47■□□□□ 0.07
CLN6-201ENST00000249806 TENM1Q9UKZ4 2725 aa15.47■□□□□ 0.07
CLN6-201ENST00000249806 RRN3P1Q2M238 152 aa15.46■□□□□ 0.07
CLN6-201ENST00000249806 SPATA3Q8NHX4 192 aa15.46■□□□□ 0.07
CLN6-201ENST00000249806 HIVEP1P15822 2718 aa15.46■□□□□ 0.07
CLN6-201ENST00000249806 TRGV2A0A075B6R0 118 aa15.45■□□□□ 0.06
CLN6-201ENST00000249806 IGHV3-30-3P0DP02 117 aa15.45■□□□□ 0.06
CLN6-201ENST00000249806 GAGE12JA6NER3 117 aa15.45■□□□□ 0.06
CLN6-201ENST00000249806 IGHV3-30P01768 117 aa15.45■□□□□ 0.06
CLN6-201ENST00000249806 LINC00694P0DN24 101 aa15.45■□□□□ 0.06
CLN6-201ENST00000249806 IGHV3-30-5P0DP03 117 aa15.45■□□□□ 0.06
CLN6-201ENST00000249806 GAGE4Q13068 117 aa15.45■□□□□ 0.06
CLN6-201ENST00000249806 GAGE5Q13069 117 aa15.45■□□□□ 0.06
CLN6-201ENST00000249806 GAGE13Q4V321 117 aa15.45■□□□□ 0.06
CLN6-201ENST00000249806 NTM-AS1Q6ZSK4 140 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms