RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 PSMB2P49721 201 aa11.59□□□□□ -0.55
LRFN1-201ENST00000248668 ZFAND6Q6FIF0 208 aa11.59□□□□□ -0.55
LRFN1-201ENST00000248668 HIST1H4GQ99525 98 aa11.59□□□□□ -0.55
LRFN1-201ENST00000248668 OPRPNQ99935 248 aaPredicted RBP11.59□□□□□ -0.55
LRFN1-201ENST00000248668 SETXQ7Z333 2677 aaKnown RBP11.59□□□□□ -0.55
LRFN1-201ENST00000248668 IGHV3OR16-12A0A075B7B8 117 aa11.58□□□□□ -0.56
LRFN1-201ENST00000248668 CCDC179H3BU77 68 aa11.58□□□□□ -0.56
LRFN1-201ENST00000248668 CD28P10747 220 aa11.58□□□□□ -0.56
LRFN1-201ENST00000248668 POLR2KP53803 58 aaKnown RBP11.58□□□□□ -0.56
LRFN1-201ENST00000248668 MORN3Q6PF18 240 aaPredicted RBP11.58□□□□□ -0.56
LRFN1-201ENST00000248668 C12orf74Q32Q52 190 aa11.58□□□□□ -0.56
LRFN1-201ENST00000248668 PPP1R17O96001 155 aa11.58□□□□□ -0.56
LRFN1-201ENST00000248668 PLNP26678 52 aa11.58□□□□□ -0.56
LRFN1-201ENST00000248668 RAX2Q96IS3 184 aa11.58□□□□□ -0.56
LRFN1-201ENST00000248668 MAP6D1Q9H9H5 199 aa11.58□□□□□ -0.56
LRFN1-201ENST00000248668 M0QY20 66 aa11.57□□□□□ -0.56
LRFN1-201ENST00000248668 HLA-DRB4P13762 266 aa11.57□□□□□ -0.56
LRFN1-201ENST00000248668 PRO0461Q9UI25 63 aa11.57□□□□□ -0.56
LRFN1-201ENST00000248668 HLA-DRB4X5D2U9 266 aa11.57□□□□□ -0.56
LRFN1-201ENST00000248668 VCYO14598 125 aa11.57□□□□□ -0.56
LRFN1-201ENST00000248668 TSHBP01222 138 aa11.57□□□□□ -0.56
LRFN1-201ENST00000248668 FOXI1Q12951 378 aa11.57□□□□□ -0.56
LRFN1-201ENST00000248668 DEFB114Q30KQ6 69 aa11.56□□□□□ -0.56
LRFN1-201ENST00000248668 NFE4Q86UQ8 179 aa11.56□□□□□ -0.56
LRFN1-201ENST00000248668 POM121L12Q8N7R1 296 aa11.56□□□□□ -0.56
LRFN1-201ENST00000248668 Q9UF83 564 aa11.56□□□□□ -0.56
LRFN1-201ENST00000248668 XCL2Q9UBD3 114 aa11.56□□□□□ -0.56
LRFN1-201ENST00000248668 ANK3Q12955 4377 aaKnown RBP11.56□□□□□ -0.56
LRFN1-201ENST00000248668 LINC01587Q99440 93 aa11.55□□□□□ -0.56
LRFN1-201ENST00000248668 CITED2Q99967 270 aaPredicted RBP11.55□□□□□ -0.56
LRFN1-201ENST00000248668 TRGV11A0A075B6L2 103 aa11.55□□□□□ -0.56
LRFN1-201ENST00000248668 TRAV12-1A0A0B4J245 112 aa11.55□□□□□ -0.56
LRFN1-201ENST00000248668 TTC32Q5I0X7 151 aa11.55□□□□□ -0.56
LRFN1-201ENST00000248668 ATRQ13535 2644 aa11.55□□□□□ -0.56
LRFN1-201ENST00000248668 TM2D2Q9BX73 214 aa11.54□□□□□ -0.56
LRFN1-201ENST00000248668 SMR3AQ99954 134 aa11.53□□□□□ -0.56
LRFN1-201ENST00000248668 C11orf86A6NJI1 115 aa11.53□□□□□ -0.56
LRFN1-201ENST00000248668 CCL24O00175 119 aa11.53□□□□□ -0.56
LRFN1-201ENST00000248668 SMCPP49901 116 aaPredicted RBP11.53□□□□□ -0.56
LRFN1-201ENST00000248668 PRADC1Q9BSG0 188 aa11.53□□□□□ -0.56
LRFN1-201ENST00000248668 RRN3P1Q2M238 152 aa11.52□□□□□ -0.56
LRFN1-201ENST00000248668 TRBV27A0A0K0K1C4 114 aa11.52□□□□□ -0.57
LRFN1-201ENST00000248668 IGIPA6NJ69 53 aa11.52□□□□□ -0.57
LRFN1-201ENST00000248668 PLA2G2AP14555 144 aa11.52□□□□□ -0.57
LRFN1-201ENST00000248668 GAGE12JA6NER3 117 aa11.51□□□□□ -0.57
LRFN1-201ENST00000248668 GAGE7O76087 117 aa11.51□□□□□ -0.57
LRFN1-201ENST00000248668 GAGE12FP0CL80 117 aa11.51□□□□□ -0.57
LRFN1-201ENST00000248668 GAGE12GP0CL81 117 aa11.51□□□□□ -0.57
LRFN1-201ENST00000248668 GAGE12IP0CL82 117 aa11.51□□□□□ -0.57
LRFN1-201ENST00000248668 KRTAP1-1Q07627 177 aa11.51□□□□□ -0.57
LRFN1-201ENST00000248668 GAGE4Q13068 117 aa11.51□□□□□ -0.57
LRFN1-201ENST00000248668 HIGD1BQ9P298 99 aa11.51□□□□□ -0.57
LRFN1-201ENST00000248668 SRSF9Q13242 221 aaKnown RBP eCLIP11.51□□□□□ -0.57
LRFN1-201ENST00000248668 ODF3L2Q3SX64 289 aa11.51□□□□□ -0.57
LRFN1-201ENST00000248668 TMEM170BQ5T4T1 132 aa11.51□□□□□ -0.57
LRFN1-201ENST00000248668 TRPT1Q86TN4 253 aaKnown RBP11.51□□□□□ -0.57
LRFN1-201ENST00000248668 J3QKU1 62 aa11.51□□□□□ -0.57
LRFN1-201ENST00000248668 M0QXV9 152 aa11.51□□□□□ -0.57
LRFN1-201ENST00000248668 FAM110AQ9BQ89 295 aa11.51□□□□□ -0.57
LRFN1-201ENST00000248668 GAGE2BQ13066 116 aa11.5□□□□□ -0.57
LRFN1-201ENST00000248668 GAGE2EQ4V326 116 aa11.5□□□□□ -0.57
LRFN1-201ENST00000248668 Q6ZSN1 163 aa11.5□□□□□ -0.57
LRFN1-201ENST00000248668 PPDPFQ9H3Y8 114 aa11.5□□□□□ -0.57
LRFN1-201ENST00000248668 GAGE2DQ9UEU5 116 aa11.5□□□□□ -0.57
LRFN1-201ENST00000248668 IGLV4-69A0A075B6H9 119 aa11.5□□□□□ -0.57
LRFN1-201ENST00000248668 RNASE13Q5GAN3 156 aaKnown RBP11.5□□□□□ -0.57
LRFN1-201ENST00000248668 TMEM86BQ8N661 226 aa11.5□□□□□ -0.57
LRFN1-201ENST00000248668 IGHV3-64A0A075B6Q5 118 aa11.49□□□□□ -0.57
LRFN1-201ENST00000248668 PMVKQ15126 192 aa11.49□□□□□ -0.57
LRFN1-201ENST00000248668 CEMP1Q6PRD7 247 aaPredicted RBP11.49□□□□□ -0.57
LRFN1-201ENST00000248668 WFDC10AQ9H1F0 79 aa11.49□□□□□ -0.57
LRFN1-201ENST00000248668 ZNF815PA8K554 130 aa11.49□□□□□ -0.57
LRFN1-201ENST00000248668 LINC01006Q8NI28 216 aa11.49□□□□□ -0.57
LRFN1-201ENST00000248668 KMT2BQ9UMN6 2715 aaPredicted RBP11.49□□□□□ -0.57
LRFN1-201ENST00000248668 IGHV3-38A0A0C4DH36 116 aa11.48□□□□□ -0.57
LRFN1-201ENST00000248668 TRBV6-5A0A0K0K1A5 114 aa11.48□□□□□ -0.57
LRFN1-201ENST00000248668 MYMXA0A1B0GTQ4 84 aa11.48□□□□□ -0.57
LRFN1-201ENST00000248668 SCGB1C2P0DMR2 95 aa11.48□□□□□ -0.57
LRFN1-201ENST00000248668 MRPL23Q16540 153 aaKnown RBP11.48□□□□□ -0.57
LRFN1-201ENST00000248668 SCGB1D4Q6XE38 83 aa11.48□□□□□ -0.57
LRFN1-201ENST00000248668 STHQ8IWL8 128 aa11.48□□□□□ -0.57
LRFN1-201ENST00000248668 PLEKHB2Q96CS7 222 aa11.48□□□□□ -0.57
LRFN1-201ENST00000248668 SNCGO76070 127 aa11.48□□□□□ -0.57
LRFN1-201ENST00000248668 NSUN5P1Q3KNT7 163 aa11.48□□□□□ -0.57
LRFN1-201ENST00000248668 ZNRF2Q8NHG8 242 aa11.48□□□□□ -0.57
LRFN1-201ENST00000248668 TNFRSF18Q9Y5U5 241 aa11.47□□□□□ -0.57
LRFN1-201ENST00000248668 I3L3M4 83 aa11.47□□□□□ -0.57
LRFN1-201ENST00000248668 M0R2P5 195 aa11.47□□□□□ -0.57
LRFN1-201ENST00000248668 INSP01308 110 aa11.47□□□□□ -0.57
LRFN1-201ENST00000248668 ZNF415Q09FC8 603 aa11.47□□□□□ -0.57
LRFN1-201ENST00000248668 CARD19Q96LW7 228 aa11.47□□□□□ -0.57
LRFN1-201ENST00000248668 H7C2G1 150 aa11.46□□□□□ -0.57
LRFN1-201ENST00000248668 MEIG1Q5JSS6 88 aa11.46□□□□□ -0.57
LRFN1-201ENST00000248668 CFAP126Q5VTH2 177 aa11.46□□□□□ -0.58
LRFN1-201ENST00000248668 LINC01549A6NIU2 74 aa11.45□□□□□ -0.58
LRFN1-201ENST00000248668 TIMM17AQ99595 171 aa11.45□□□□□ -0.58
LRFN1-201ENST00000248668 NBEAL1Q6ZS30 2694 aa11.45□□□□□ -0.58
LRFN1-201ENST00000248668 IGHV3-53P01767 116 aa11.45□□□□□ -0.58
LRFN1-201ENST00000248668 C20orf203Q8NBC4 194 aa11.45□□□□□ -0.58
LRFN1-201ENST00000248668 TMEM141Q96I45 108 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms