RNA–Protein interactions for RNA: ENST00000248437.8

TUBA4A-201, Transcript of tubulin alpha 4a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA4A, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-201ENST00000248437 C11orf86A6NJI1 115 aa13.38□□□□□ -0.27
TUBA4A-201ENST00000248437 MAPKAPK5-AS1Q8N8E1 139 aa13.38□□□□□ -0.27
TUBA4A-201ENST00000248437 TRGV1A0A0A0MS02 117 aa13.37□□□□□ -0.27
TUBA4A-201ENST00000248437 OR4C5Q8NGB2 326 aa13.37□□□□□ -0.27
TUBA4A-201ENST00000248437 ATRQ13535 2644 aa13.37□□□□□ -0.27
TUBA4A-201ENST00000248437 DAZ2Q13117 558 aaKnown RBP13.37□□□□□ -0.27
TUBA4A-201ENST00000248437 C16orf74Q96GX8 76 aa13.37□□□□□ -0.27
TUBA4A-201ENST00000248437 NPSP0C0P6 89 aa13.36□□□□□ -0.27
TUBA4A-201ENST00000248437 RPL35AP18077 110 aaKnown RBP13.36□□□□□ -0.27
TUBA4A-201ENST00000248437 CSNK1G2-AS1Q8NCQ2 148 aa13.36□□□□□ -0.27
TUBA4A-201ENST00000248437 CRYBA4P53673 196 aa13.35□□□□□ -0.27
TUBA4A-201ENST00000248437 HERVK_113P61574 105 aa13.35□□□□□ -0.27
TUBA4A-201ENST00000248437 NFE4Q86UQ8 179 aa13.35□□□□□ -0.27
TUBA4A-201ENST00000248437 PRADC1Q9BSG0 188 aa13.35□□□□□ -0.27
TUBA4A-201ENST00000248437 Q9UF83 564 aa13.35□□□□□ -0.27
TUBA4A-201ENST00000248437 MYMXA0A1B0GTQ4 84 aa13.35□□□□□ -0.27
TUBA4A-201ENST00000248437 IGLV4-3A0A075B6K6 122 aa13.34□□□□□ -0.27
TUBA4A-201ENST00000248437 TRAV4A0A0B4J268 109 aa13.34□□□□□ -0.27
TUBA4A-201ENST00000248437 INSL3P51460 131 aa13.34□□□□□ -0.27
TUBA4A-201ENST00000248437 TAL2Q16559 108 aa13.34□□□□□ -0.27
TUBA4A-201ENST00000248437 Q6ZTI0 123 aa13.34□□□□□ -0.27
TUBA4A-201ENST00000248437 ZNRF2Q8NHG8 242 aa13.33□□□□□ -0.28
TUBA4A-201ENST00000248437 OPRPNQ99935 248 aaPredicted RBP13.33□□□□□ -0.28
TUBA4A-201ENST00000248437 CHCHD7Q9BUK0 85 aa13.33□□□□□ -0.28
TUBA4A-201ENST00000248437 VCX2Q9H322 139 aa13.33□□□□□ -0.28
TUBA4A-201ENST00000248437 TRBV10-1A0A0K0K1A3 114 aa13.32□□□□□ -0.28
TUBA4A-201ENST00000248437 PLAC8L1A1L4L8 177 aa13.32□□□□□ -0.28
TUBA4A-201ENST00000248437 H3BRM9 83 aa13.32□□□□□ -0.28
TUBA4A-201ENST00000248437 EMP1P54849 157 aa13.32□□□□□ -0.28
TUBA4A-201ENST00000248437 ZNF479Q96JC4 524 aa13.32□□□□□ -0.28
TUBA4A-201ENST00000248437 TM2D2Q9BX73 214 aa13.32□□□□□ -0.28
TUBA4A-201ENST00000248437 FBN1P35555 2871 aaKnown RBP13.32□□□□□ -0.28
TUBA4A-201ENST00000248437 COTL1Q14019 142 aa13.31□□□□□ -0.28
TUBA4A-201ENST00000248437 AMELXQ99217 191 aa13.31□□□□□ -0.28
TUBA4A-201ENST00000248437 NOP10Q9NPE3 64 aaKnown RBP13.31□□□□□ -0.28
TUBA4A-201ENST00000248437 SPANXA1Q9NS26 97 aa13.31□□□□□ -0.28
TUBA4A-201ENST00000248437 VWFP04275 2813 aa13.31□□□□□ -0.28
TUBA4A-201ENST00000248437 GCSHP23434 173 aa13.31□□□□□ -0.28
TUBA4A-201ENST00000248437 RRN3P1Q2M238 152 aa13.31□□□□□ -0.28
TUBA4A-201ENST00000248437 OVOL2Q9BRP0 275 aa13.31□□□□□ -0.28
TUBA4A-201ENST00000248437 CIDEAO60543 219 aa13.3□□□□□ -0.28
TUBA4A-201ENST00000248437 UBE2V1Q13404 147 aa13.3□□□□□ -0.28
TUBA4A-201ENST00000248437 TMEM170BQ5T4T1 132 aa13.3□□□□□ -0.28
TUBA4A-201ENST00000248437 C9orf66Q5T8R8 295 aa13.3□□□□□ -0.28
TUBA4A-201ENST00000248437 CEND1Q8N111 149 aa13.3□□□□□ -0.28
TUBA4A-201ENST00000248437 TRRAPQ9Y4A5 3859 aa13.3□□□□□ -0.28
TUBA4A-201ENST00000248437 TRBV7-3A0A075B6L6 115 aa13.3□□□□□ -0.28
TUBA4A-201ENST00000248437 K7EQD1 137 aa13.3□□□□□ -0.28
TUBA4A-201ENST00000248437 KRTAP24-1Q3LI83 254 aa13.29□□□□□ -0.28
TUBA4A-201ENST00000248437 FAM104AQ969W3 186 aa13.29□□□□□ -0.28
TUBA4A-201ENST00000248437 UBE2D4Q9Y2X8 147 aa13.29□□□□□ -0.28
TUBA4A-201ENST00000248437 ZNF815PA8K554 130 aa13.28□□□□□ -0.28
TUBA4A-201ENST00000248437 FXYD2P54710 66 aa13.28□□□□□ -0.28
TUBA4A-201ENST00000248437 VAMP3Q15836 100 aa13.28□□□□□ -0.28
TUBA4A-201ENST00000248437 RPL36AP83881 106 aaKnown RBP13.28□□□□□ -0.28
TUBA4A-201ENST00000248437 PRIMA1Q86XR5 153 aa13.28□□□□□ -0.28
TUBA4A-201ENST00000248437 PHLDA1Q8WV24 401 aaPredicted RBP13.28□□□□□ -0.28
TUBA4A-201ENST00000248437 RPL36ALQ969Q0 106 aaKnown RBP13.28□□□□□ -0.28
TUBA4A-201ENST00000248437 IGHV3-38A0A0C4DH36 116 aa13.27□□□□□ -0.28
TUBA4A-201ENST00000248437 PTTG1IPP53801 180 aa13.27□□□□□ -0.28
TUBA4A-201ENST00000248437 CITED1Q99966 193 aa13.27□□□□□ -0.28
TUBA4A-201ENST00000248437 C9orf118A6NHY6 69 aa13.27□□□□□ -0.29
TUBA4A-201ENST00000248437 SPATA3Q8NHX4 192 aa13.27□□□□□ -0.29
TUBA4A-201ENST00000248437 DAZ4Q86SG3 579 aaKnown RBP13.26□□□□□ -0.29
TUBA4A-201ENST00000248437 HIST1H4GQ99525 98 aa13.26□□□□□ -0.29
TUBA4A-201ENST00000248437 DAZ3Q9NR90 486 aaKnown RBP13.26□□□□□ -0.29
TUBA4A-201ENST00000248437 TMEM223A0PJW6 202 aa13.25□□□□□ -0.29
TUBA4A-201ENST00000248437 CCL25O15444 150 aa13.25□□□□□ -0.29
TUBA4A-201ENST00000248437 ZNF22P17026 224 aaPredicted RBP13.25□□□□□ -0.29
TUBA4A-201ENST00000248437 MRPS36P82909 103 aaKnown RBP13.25□□□□□ -0.29
TUBA4A-201ENST00000248437 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.25□□□□□ -0.29
TUBA4A-201ENST00000248437 A0A0J9YXV3 536 aa13.25□□□□□ -0.29
TUBA4A-201ENST00000248437 IGKV2-29A2NJV5 120 aaPredicted RBP13.25□□□□□ -0.29
TUBA4A-201ENST00000248437 SMIM13P0DJ93 91 aa13.25□□□□□ -0.29
TUBA4A-201ENST00000248437 SLC25A29Q8N8R3 303 aa13.25□□□□□ -0.29
TUBA4A-201ENST00000248437 TIMM21Q9BVV7 248 aa13.25□□□□□ -0.29
TUBA4A-201ENST00000248437 TRGV2A0A075B6R0 118 aa13.24□□□□□ -0.29
TUBA4A-201ENST00000248437 CEMP1Q6PRD7 247 aaPredicted RBP13.24□□□□□ -0.29
TUBA4A-201ENST00000248437 NOTCH3Q9UM47 2321 aa13.24□□□□□ -0.29
TUBA4A-201ENST00000248437 GAGE12BA1L429 117 aa13.24□□□□□ -0.29
TUBA4A-201ENST00000248437 GAGE7O76087 117 aa13.24□□□□□ -0.29
TUBA4A-201ENST00000248437 GAGE12FP0CL80 117 aa13.24□□□□□ -0.29
TUBA4A-201ENST00000248437 GAGE12GP0CL81 117 aa13.24□□□□□ -0.29
TUBA4A-201ENST00000248437 GAGE12IP0CL82 117 aa13.24□□□□□ -0.29
TUBA4A-201ENST00000248437 K7EP13 123 aa13.23□□□□□ -0.29
TUBA4A-201ENST00000248437 UBE2D3P61077 147 aa13.23□□□□□ -0.29
TUBA4A-201ENST00000248437 UBE2D2P62837 147 aa13.23□□□□□ -0.29
TUBA4A-201ENST00000248437 SCGB1D4Q6XE38 83 aa13.23□□□□□ -0.29
TUBA4A-201ENST00000248437 J3QQQ9 107 aa13.22□□□□□ -0.29
TUBA4A-201ENST00000248437 LEPROTO15243 131 aa13.22□□□□□ -0.29
TUBA4A-201ENST00000248437 AMMECR1LQ6DCA0 310 aa13.22□□□□□ -0.29
TUBA4A-201ENST00000248437 TRBV6-4A0A1B0GX49 114 aa13.22□□□□□ -0.29
TUBA4A-201ENST00000248437 TSPEAR-AS2P59090 65 aa13.22□□□□□ -0.29
TUBA4A-201ENST00000248437 PLEKHB2Q96CS7 222 aa13.21□□□□□ -0.29
TUBA4A-201ENST00000248437 LGALS3P17931 250 aaKnown RBP13.21□□□□□ -0.3
TUBA4A-201ENST00000248437 Q6ZUT4 128 aa13.21□□□□□ -0.3
TUBA4A-201ENST00000248437 TINCRA0A1B0GVN0 87 aa13.2□□□□□ -0.3
TUBA4A-201ENST00000248437 RAB37Q96AX2 223 aa13.2□□□□□ -0.3
TUBA4A-201ENST00000248437 NHP2Q9NX24 153 aaKnown RBP13.2□□□□□ -0.3
TUBA4A-201ENST00000248437 H3BUT2 72 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms