RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 PLNP26678 52 aa16.69■□□□□ 0.26
SYNGR3-201ENST00000248121 NMUP48645 174 aa16.69■□□□□ 0.26
SYNGR3-201ENST00000248121 OR4C5Q8NGB2 326 aa16.69■□□□□ 0.26
SYNGR3-201ENST00000248121 TMEM141Q96I45 108 aa16.68■□□□□ 0.26
SYNGR3-201ENST00000248121 RRN3P1Q2M238 152 aa16.67■□□□□ 0.26
SYNGR3-201ENST00000248121 TTTY13Q9BZ97 58 aa16.66■□□□□ 0.26
SYNGR3-201ENST00000248121 TRAV4A0A0B4J268 109 aa16.66■□□□□ 0.26
SYNGR3-201ENST00000248121 IGHV4-30-4P0DP06 118 aa16.66■□□□□ 0.26
SYNGR3-201ENST00000248121 MPV17L2Q567V2 206 aa16.66■□□□□ 0.26
SYNGR3-201ENST00000248121 DNAJC30Q96LL9 226 aa16.66■□□□□ 0.26
SYNGR3-201ENST00000248121 OPRPNQ99935 248 aaPredicted RBP16.66■□□□□ 0.26
SYNGR3-201ENST00000248121 NBEAL2Q6ZNJ1 2754 aa16.66■□□□□ 0.26
SYNGR3-201ENST00000248121 DLEU1O43261 78 aa16.65■□□□□ 0.26
SYNGR3-201ENST00000248121 EGFEM1PQ0D2K5 195 aa16.65■□□□□ 0.26
SYNGR3-201ENST00000248121 OVOL2Q9BRP0 275 aa16.65■□□□□ 0.26
SYNGR3-201ENST00000248121 IGLV4-69A0A075B6H9 119 aa16.65■□□□□ 0.26
SYNGR3-201ENST00000248121 PMVKQ15126 192 aa16.65■□□□□ 0.26
SYNGR3-201ENST00000248121 CST9LQ9H4G1 147 aa16.65■□□□□ 0.26
SYNGR3-201ENST00000248121 DNAH3Q8TD57 4116 aa16.64■□□□□ 0.25
SYNGR3-201ENST00000248121 IGHV3-38A0A0C4DH36 116 aa16.62■□□□□ 0.25
SYNGR3-201ENST00000248121 PHLDA1Q8WV24 401 aaPredicted RBP16.62■□□□□ 0.25
SYNGR3-201ENST00000248121 FAM104AQ969W3 186 aa16.62■□□□□ 0.25
SYNGR3-201ENST00000248121 CHCHD7Q9BUK0 85 aa16.62■□□□□ 0.25
SYNGR3-201ENST00000248121 GAGE12BA1L429 117 aa16.61■□□□□ 0.25
SYNGR3-201ENST00000248121 GAGE7O76087 117 aa16.61■□□□□ 0.25
SYNGR3-201ENST00000248121 GAGE12FP0CL80 117 aa16.61■□□□□ 0.25
SYNGR3-201ENST00000248121 GAGE12GP0CL81 117 aa16.61■□□□□ 0.25
SYNGR3-201ENST00000248121 GAGE12IP0CL82 117 aa16.61■□□□□ 0.25
SYNGR3-201ENST00000248121 COL5A1-AS1Q5SY13 56 aa16.61■□□□□ 0.25
SYNGR3-201ENST00000248121 EMP1P54849 157 aa16.61■□□□□ 0.25
SYNGR3-201ENST00000248121 DEFB135Q30KP9 77 aa16.61■□□□□ 0.25
SYNGR3-201ENST00000248121 C11orf86A6NJI1 115 aa16.6■□□□□ 0.25
SYNGR3-201ENST00000248121 BVES-AS1Q5T3Y7 98 aa16.6■□□□□ 0.25
SYNGR3-201ENST00000248121 SLC25A29Q8N8R3 303 aa16.6■□□□□ 0.25
SYNGR3-201ENST00000248121 IGLV4-3A0A075B6K6 122 aa16.59■□□□□ 0.25
SYNGR3-201ENST00000248121 K7EQD1 137 aa16.59■□□□□ 0.25
SYNGR3-201ENST00000248121 ZNRF2Q8NHG8 242 aa16.59■□□□□ 0.25
SYNGR3-201ENST00000248121 X6R8D5 127 aa16.59■□□□□ 0.25
SYNGR3-201ENST00000248121 NOTCH1P46531 2555 aa16.58■□□□□ 0.25
SYNGR3-201ENST00000248121 SIVA1O15304 175 aa16.58■□□□□ 0.25
SYNGR3-201ENST00000248121 SAMD5Q5TGI4 173 aa16.58■□□□□ 0.24
SYNGR3-201ENST00000248121 LURAP1LQ8IV03 231 aa16.58■□□□□ 0.24
SYNGR3-201ENST00000248121 MAPKAPK5-AS1Q8N8E1 139 aa16.58■□□□□ 0.24
SYNGR3-201ENST00000248121 TRBV7-3A0A075B6L6 115 aa16.57■□□□□ 0.24
SYNGR3-201ENST00000248121 TRGV2A0A075B6R0 118 aa16.57■□□□□ 0.24
SYNGR3-201ENST00000248121 CEMP1Q6PRD7 247 aaPredicted RBP16.57■□□□□ 0.24
SYNGR3-201ENST00000248121 ZMAT5Q9UDW3 170 aaKnown RBP16.57■□□□□ 0.24
SYNGR3-201ENST00000248121 PYGO1Q9Y3Y4 419 aa16.57■□□□□ 0.24
SYNGR3-201ENST00000248121 TRBV10-1A0A0K0K1A3 114 aa16.57■□□□□ 0.24
SYNGR3-201ENST00000248121 KIR2DL5BQ8NHK3 375 aa16.56■□□□□ 0.24
SYNGR3-201ENST00000248121 COTL1Q14019 142 aa16.55■□□□□ 0.24
SYNGR3-201ENST00000248121 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.55■□□□□ 0.24
SYNGR3-201ENST00000248121 TRAV8-6A0A0B4J262 113 aa16.55■□□□□ 0.24
SYNGR3-201ENST00000248121 IGKV2-29A2NJV5 120 aaPredicted RBP16.55■□□□□ 0.24
SYNGR3-201ENST00000248121 PRB2P02812 416 aaPredicted RBP16.55■□□□□ 0.24
SYNGR3-201ENST00000248121 APOC4P55056 127 aa16.55■□□□□ 0.24
SYNGR3-201ENST00000248121 UBE2D4Q9Y2X8 147 aa16.54■□□□□ 0.24
SYNGR3-201ENST00000248121 E9PLD3 99 aa16.53■□□□□ 0.24
SYNGR3-201ENST00000248121 RPL36AP83881 106 aaKnown RBP16.53■□□□□ 0.24
SYNGR3-201ENST00000248121 PAPPA-AS1Q5QFB9 102 aa16.53■□□□□ 0.24
SYNGR3-201ENST00000248121 RPL36ALQ969Q0 106 aaKnown RBP16.53■□□□□ 0.24
SYNGR3-201ENST00000248121 TRBV25-1A0A075B6N4 114 aa16.52■□□□□ 0.24
SYNGR3-201ENST00000248121 UBE2D3P61077 147 aa16.52■□□□□ 0.24
SYNGR3-201ENST00000248121 UBE2D2P62837 147 aa16.52■□□□□ 0.24
SYNGR3-201ENST00000248121 TMEM97Q5BJF2 176 aa16.52■□□□□ 0.24
SYNGR3-201ENST00000248121 AMELXQ99217 191 aa16.52■□□□□ 0.24
SYNGR3-201ENST00000248121 NBEAL1Q6ZS30 2694 aa16.52■□□□□ 0.23
SYNGR3-201ENST00000248121 NFE4Q86UQ8 179 aa16.52■□□□□ 0.23
SYNGR3-201ENST00000248121 VCX2Q9H322 139 aa16.52■□□□□ 0.23
SYNGR3-201ENST00000248121 GAGE12JA6NER3 117 aa16.51■□□□□ 0.23
SYNGR3-201ENST00000248121 GAGE1Q13065 139 aa16.51■□□□□ 0.23
SYNGR3-201ENST00000248121 GAGE4Q13068 117 aa16.51■□□□□ 0.23
SYNGR3-201ENST00000248121 GAGE5Q13069 117 aa16.51■□□□□ 0.23
SYNGR3-201ENST00000248121 GAGE13Q4V321 117 aa16.51■□□□□ 0.23
SYNGR3-201ENST00000248121 LINC00612Q8N6U2 182 aa16.51■□□□□ 0.23
SYNGR3-201ENST00000248121 PRADC1Q9BSG0 188 aa16.51■□□□□ 0.23
SYNGR3-201ENST00000248121 DEFB4AO15263 64 aa16.5■□□□□ 0.23
SYNGR3-201ENST00000248121 FHL2Q14192 279 aa16.5■□□□□ 0.23
SYNGR3-201ENST00000248121 NTM-AS1Q6ZSK4 140 aa16.5■□□□□ 0.23
SYNGR3-201ENST00000248121 Q6ZVH6 145 aa16.5■□□□□ 0.23
SYNGR3-201ENST00000248121 HIGD1BQ9P298 99 aa16.5■□□□□ 0.23
SYNGR3-201ENST00000248121 LOC100131303A0A0U1RQF7 123 aa16.5■□□□□ 0.23
SYNGR3-201ENST00000248121 CIDEAO60543 219 aa16.5■□□□□ 0.23
SYNGR3-201ENST00000248121 OR11H2Q8NH07 326 aa16.5■□□□□ 0.23
SYNGR3-201ENST00000248121 TRBV6-4A0A1B0GX49 114 aa16.49■□□□□ 0.23
SYNGR3-201ENST00000248121 SMIM9A6NGZ8 99 aa16.49■□□□□ 0.23
SYNGR3-201ENST00000248121 RNASE13Q5GAN3 156 aaKnown RBP16.49■□□□□ 0.23
SYNGR3-201ENST00000248121 SPANXA1Q9NS26 97 aa16.49■□□□□ 0.23
SYNGR3-201ENST00000248121 HSD52Q0P140 79 aa16.49■□□□□ 0.23
SYNGR3-201ENST00000248121 DAZ4Q86SG3 579 aaKnown RBP16.49■□□□□ 0.23
SYNGR3-201ENST00000248121 CHAC1Q9BUX1 264 aa16.49■□□□□ 0.23
SYNGR3-201ENST00000248121 DAZ3Q9NR90 486 aaKnown RBP16.49■□□□□ 0.23
SYNGR3-201ENST00000248121 NPSP0C0P6 89 aa16.48■□□□□ 0.23
SYNGR3-201ENST00000248121 RETNQ9HD89 108 aa16.48■□□□□ 0.23
SYNGR3-201ENST00000248121 MGAM2Q2M2H8 2515 aa16.48■□□□□ 0.23
SYNGR3-201ENST00000248121 TRGV4A0A0C4DH28 118 aa16.47■□□□□ 0.23
SYNGR3-201ENST00000248121 A0A0J9YXV3 536 aa16.47■□□□□ 0.23
SYNGR3-201ENST00000248121 DEFB130BP0DP73 79 aa16.47■□□□□ 0.23
SYNGR3-201ENST00000248121 DEFB130AP0DP74 79 aa16.47■□□□□ 0.23
SYNGR3-201ENST00000248121 CRYBA4P53673 196 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms