RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 SPART-AS1P0CW21 52 aa10.05□□□□□ -0.8
SDF2-201ENST00000247020 ODF1Q14990 250 aa10.05□□□□□ -0.8
SDF2-201ENST00000247020 GTSF1LQ9H1H1 148 aa10.04□□□□□ -0.8
SDF2-201ENST00000247020 C11orf68Q9H3H3 251 aaKnown RBP10.04□□□□□ -0.8
SDF2-201ENST00000247020 Q9UF83 564 aa10.04□□□□□ -0.8
SDF2-201ENST00000247020 PYGO1Q9Y3Y4 419 aa10.04□□□□□ -0.8
SDF2-201ENST00000247020 A0A087WX48 190 aa10.03□□□□□ -0.8
SDF2-201ENST00000247020 HSBP1L1C9JCN9 74 aa10.03□□□□□ -0.8
SDF2-201ENST00000247020 LINC00694P0DN24 101 aa10.03□□□□□ -0.8
SDF2-201ENST00000247020 CRYBA4P53673 196 aa10.03□□□□□ -0.8
SDF2-201ENST00000247020 DAD1P61803 113 aa10.03□□□□□ -0.8
SDF2-201ENST00000247020 SPATA45Q537H7 98 aa10.03□□□□□ -0.8
SDF2-201ENST00000247020 BAALCQ8WXS3 180 aa10.03□□□□□ -0.8
SDF2-201ENST00000247020 PRO0255Q9UI72 69 aa10.03□□□□□ -0.8
SDF2-201ENST00000247020 HHLA3Q9XRX5 114 aa10.03□□□□□ -0.8
SDF2-201ENST00000247020 PAM16Q9Y3D7 125 aa10.03□□□□□ -0.8
SDF2-201ENST00000247020 PKD1L1Q8TDX9 2849 aa10.03□□□□□ -0.8
SDF2-201ENST00000247020 RPL39P62891 51 aaKnown RBP10.02□□□□□ -0.81
SDF2-201ENST00000247020 TMEM97Q5BJF2 176 aa10.02□□□□□ -0.81
SDF2-201ENST00000247020 PAPPA-AS1Q5QFB9 102 aa10.02□□□□□ -0.81
SDF2-201ENST00000247020 ATOH7Q8N100 152 aa10.02□□□□□ -0.81
SDF2-201ENST00000247020 CHCHD7Q9BUK0 85 aa10.02□□□□□ -0.81
SDF2-201ENST00000247020 ATP5G1P05496 136 aa10.01□□□□□ -0.81
SDF2-201ENST00000247020 SMAGPQ0VAQ4 97 aa10.01□□□□□ -0.81
SDF2-201ENST00000247020 GAGE12JA6NER3 117 aa10.01□□□□□ -0.81
SDF2-201ENST00000247020 PCP4L1A6NKN8 68 aa10.01□□□□□ -0.81
SDF2-201ENST00000247020 F8VRH5 84 aa10.01□□□□□ -0.81
SDF2-201ENST00000247020 DPM2O94777 84 aa10.01□□□□□ -0.81
SDF2-201ENST00000247020 PLNP26678 52 aa10.01□□□□□ -0.81
SDF2-201ENST00000247020 GAGE1Q13065 139 aa10.01□□□□□ -0.81
SDF2-201ENST00000247020 GAGE4Q13068 117 aa10.01□□□□□ -0.81
SDF2-201ENST00000247020 GAGE5Q13069 117 aa10.01□□□□□ -0.81
SDF2-201ENST00000247020 GAGE13Q4V321 117 aa10.01□□□□□ -0.81
SDF2-201ENST00000247020 PHLDA1Q8WV24 401 aaPredicted RBP10.01□□□□□ -0.81
SDF2-201ENST00000247020 TIMM21Q9BVV7 248 aa10.01□□□□□ -0.81
SDF2-201ENST00000247020 SPANXA1Q9NS26 97 aa10.01□□□□□ -0.81
SDF2-201ENST00000247020 IGKCP01834 107 aa10□□□□□ -0.81
SDF2-201ENST00000247020 PMVKQ15126 192 aa10□□□□□ -0.81
SDF2-201ENST00000247020 PRO1933Q9H354 126 aa10□□□□□ -0.81
SDF2-201ENST00000247020 CELA1Q9UNI1 258 aa10□□□□□ -0.81
SDF2-201ENST00000247020 IGHV3-38A0A0C4DH36 116 aa9.99□□□□□ -0.81
SDF2-201ENST00000247020 DEFB4AO15263 64 aa9.99□□□□□ -0.81
SDF2-201ENST00000247020 PMCHL2Q9BQD1 86 aa9.99□□□□□ -0.81
SDF2-201ENST00000247020 CHTOPQ9Y3Y2 248 aaKnown RBP9.99□□□□□ -0.81
SDF2-201ENST00000247020 H7C423 109 aa9.98□□□□□ -0.81
SDF2-201ENST00000247020 K7EIL1 84 aa9.98□□□□□ -0.81
SDF2-201ENST00000247020 DEFB104AQ8WTQ1 72 aa9.98□□□□□ -0.81
SDF2-201ENST00000247020 SPATA25Q9BR10 227 aa9.98□□□□□ -0.81
SDF2-201ENST00000247020 MRPL35Q9NZE8 188 aaKnown RBP9.98□□□□□ -0.81
SDF2-201ENST00000247020 PRSS29PA6NIE9 313 aa9.97□□□□□ -0.81
SDF2-201ENST00000247020 DDTP30046 118 aa9.97□□□□□ -0.81
SDF2-201ENST00000247020 UBE2D4Q9Y2X8 147 aa9.97□□□□□ -0.81
SDF2-201ENST00000247020 CSDC2Q9Y534 153 aaKnown RBP9.97□□□□□ -0.81
SDF2-201ENST00000247020 IGLV4-3A0A075B6K6 122 aa9.97□□□□□ -0.81
SDF2-201ENST00000247020 LOC100131303A0A0U1RQF7 123 aa9.97□□□□□ -0.81
SDF2-201ENST00000247020 IGLC3P0DOY3 106 aa9.97□□□□□ -0.81
SDF2-201ENST00000247020 MRPS36P82909 103 aaKnown RBP9.97□□□□□ -0.81
SDF2-201ENST00000247020 MAJINQ3KP22 176 aa9.97□□□□□ -0.81
SDF2-201ENST00000247020 MRPL52Q86TS9 123 aaKnown RBP9.97□□□□□ -0.81
SDF2-201ENST00000247020 LURAP1LQ8IV03 231 aa9.97□□□□□ -0.81
SDF2-201ENST00000247020 SBSPONQ8IVN8 264 aa9.97□□□□□ -0.81
SDF2-201ENST00000247020 MIEN1Q9BRT3 115 aa9.97□□□□□ -0.81
SDF2-201ENST00000247020 CST9LQ9H4G1 147 aa9.97□□□□□ -0.81
SDF2-201ENST00000247020 TRBV25-1A0A075B6N4 114 aa9.96□□□□□ -0.82
SDF2-201ENST00000247020 hDV102S1A0JD36 115 aa9.96□□□□□ -0.82
SDF2-201ENST00000247020 PAX4O43316 350 aa9.96□□□□□ -0.82
SDF2-201ENST00000247020 GYPEP15421 78 aa9.96□□□□□ -0.82
SDF2-201ENST00000247020 NTM-AS1Q6ZSK4 140 aa9.96□□□□□ -0.82
SDF2-201ENST00000247020 AMELXQ99217 191 aa9.96□□□□□ -0.82
SDF2-201ENST00000247020 TM2D3Q9BRN9 247 aa9.96□□□□□ -0.82
SDF2-201ENST00000247020 RETNQ9HD89 108 aa9.96□□□□□ -0.82
SDF2-201ENST00000247020 UQCR10Q9UDW1 63 aa9.96□□□□□ -0.82
SDF2-201ENST00000247020 TRAV26-1A0A087WT03 109 aa9.95□□□□□ -0.82
SDF2-201ENST00000247020 TMEM243Q9BU79 118 aa9.95□□□□□ -0.82
SDF2-201ENST00000247020 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.94□□□□□ -0.82
SDF2-201ENST00000247020 IGKV2-29A2NJV5 120 aaPredicted RBP9.94□□□□□ -0.82
SDF2-201ENST00000247020 SH2D6Q7Z4S9 175 aa9.94□□□□□ -0.82
SDF2-201ENST00000247020 ATP6V0E2Q8NHE4 81 aa9.94□□□□□ -0.82
SDF2-201ENST00000247020 VCX2Q9H322 139 aa9.94□□□□□ -0.82
SDF2-201ENST00000247020 NBEAL2Q6ZNJ1 2754 aa9.94□□□□□ -0.82
SDF2-201ENST00000247020 TRBV6-8A0A0A6YYG3 113 aa9.93□□□□□ -0.82
SDF2-201ENST00000247020 C12orf74Q32Q52 190 aa9.93□□□□□ -0.82
SDF2-201ENST00000247020 H3BNG1 76 aa9.92□□□□□ -0.82
SDF2-201ENST00000247020 UBE2L6O14933 153 aa9.92□□□□□ -0.82
SDF2-201ENST00000247020 ZNF25P17030 456 aaPredicted RBP9.92□□□□□ -0.82
SDF2-201ENST00000247020 KRTAP21-3Q3LHN1 58 aa9.92□□□□□ -0.82
SDF2-201ENST00000247020 ZC2HC1BQ5TFG8 222 aa9.92□□□□□ -0.82
SDF2-201ENST00000247020 NFE4Q86UQ8 179 aa9.92□□□□□ -0.82
SDF2-201ENST00000247020 FAM104AQ969W3 186 aa9.92□□□□□ -0.82
SDF2-201ENST00000247020 VSIG2Q96IQ7 327 aa9.92□□□□□ -0.82
SDF2-201ENST00000247020 IGLV4-69A0A075B6H9 119 aa9.92□□□□□ -0.82
SDF2-201ENST00000247020 F5H768 121 aa9.92□□□□□ -0.82
SDF2-201ENST00000247020 FGF6P10767 208 aa9.92□□□□□ -0.82
SDF2-201ENST00000247020 ANKRD39Q53RE8 183 aa9.92□□□□□ -0.82
SDF2-201ENST00000247020 DGAT2L7PQ6IED9 249 aa9.92□□□□□ -0.82
SDF2-201ENST00000247020 COX8AP10176 69 aa9.91□□□□□ -0.82
SDF2-201ENST00000247020 MRPL23Q16540 153 aaKnown RBP9.91□□□□□ -0.82
SDF2-201ENST00000247020 DEFB121Q5J5C9 76 aa9.91□□□□□ -0.82
SDF2-201ENST00000247020 SLC25A34Q6PIV7 304 aa9.91□□□□□ -0.82
SDF2-201ENST00000247020 OPRPNQ99935 248 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms