RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 DEFB4AO15263 64 aa7□□□□□ -1.29
COL21A1-201ENST00000244728 Q6ZS46 218 aa7□□□□□ -1.29
COL21A1-201ENST00000244728 CITED2Q99967 270 aaPredicted RBP7□□□□□ -1.29
COL21A1-201ENST00000244728 RAI1Q7Z5J4 1906 aaPredicted RBP7□□□□□ -1.29
COL21A1-201ENST00000244728 TRBV7-3A0A075B6L6 115 aa7□□□□□ -1.29
COL21A1-201ENST00000244728 A6NDX4 124 aa7□□□□□ -1.29
COL21A1-201ENST00000244728 Q6ZQT7 251 aa7□□□□□ -1.29
COL21A1-201ENST00000244728 TMEM86BQ8N661 226 aa7□□□□□ -1.29
COL21A1-201ENST00000244728 FREM2Q5SZK8 3169 aa7□□□□□ -1.29
COL21A1-201ENST00000244728 RHOHQ15669 191 aa7□□□□□ -1.29
COL21A1-201ENST00000244728 S100A7L2Q5SY68 101 aa7□□□□□ -1.29
COL21A1-201ENST00000244728 C11orf71Q6IPW1 123 aa7□□□□□ -1.29
COL21A1-201ENST00000244728 MRAPQ8TCY5 172 aa7□□□□□ -1.29
COL21A1-201ENST00000244728 ZFAND3Q9H8U3 227 aa7□□□□□ -1.29
COL21A1-201ENST00000244728 RBMY1BA6NDE4 496 aaKnown RBP6.99□□□□□ -1.29
COL21A1-201ENST00000244728 RBMY1EA6NEQ0 496 aaKnown RBP6.99□□□□□ -1.29
COL21A1-201ENST00000244728 RBMY1DP0C7P1 496 aaKnown RBP6.99□□□□□ -1.29
COL21A1-201ENST00000244728 RBMY1A1P0DJD3 496 aaKnown RBP6.99□□□□□ -1.29
COL21A1-201ENST00000244728 RBMY1CP0DJD4 496 aa6.99□□□□□ -1.29
COL21A1-201ENST00000244728 MRGPRG-AS1Q2M3A8 158 aa6.99□□□□□ -1.29
COL21A1-201ENST00000244728 SMIM20Q8N5G0 67 aa6.99□□□□□ -1.29
COL21A1-201ENST00000244728 TIMM17AQ99595 171 aa6.99□□□□□ -1.29
COL21A1-201ENST00000244728 CNFNQ9BYD5 112 aa6.99□□□□□ -1.29
COL21A1-201ENST00000244728 CFAP126Q5VTH2 177 aa6.99□□□□□ -1.29
COL21A1-201ENST00000244728 GAGE2AQ6NT46 116 aa6.99□□□□□ -1.29
COL21A1-201ENST00000244728 PRSS47A8MTI9 375 aa6.99□□□□□ -1.29
COL21A1-201ENST00000244728 CFAP46Q8IYW2 2715 aa6.98□□□□□ -1.29
COL21A1-201ENST00000244728 AKAP13Q12802 2813 aa6.98□□□□□ -1.29
COL21A1-201ENST00000244728 C9orf153Q5TBE3 101 aa6.98□□□□□ -1.29
COL21A1-201ENST00000244728 TMEM243Q9BU79 118 aa6.98□□□□□ -1.29
COL21A1-201ENST00000244728 ZMAT4Q9H898 229 aa6.98□□□□□ -1.29
COL21A1-201ENST00000244728 ZNF292O60281 2723 aa6.98□□□□□ -1.29
COL21A1-201ENST00000244728 XGP55808 180 aa6.98□□□□□ -1.29
COL21A1-201ENST00000244728 GPHB5Q86YW7 130 aa6.98□□□□□ -1.29
COL21A1-201ENST00000244728 TNFRSF13BO14836 293 aaPredicted RBP6.97□□□□□ -1.29
COL21A1-201ENST00000244728 PRR9Q5T870 116 aa6.97□□□□□ -1.29
COL21A1-201ENST00000244728 C20orf173Q96LM9 149 aa6.97□□□□□ -1.29
COL21A1-201ENST00000244728 SLC25A29Q8N8R3 303 aa6.97□□□□□ -1.29
COL21A1-201ENST00000244728 DAND5Q8N907 189 aa6.97□□□□□ -1.29
COL21A1-201ENST00000244728 EDA2RQ9HAV5 297 aa6.97□□□□□ -1.29
COL21A1-201ENST00000244728 ANGP03950 147 aaKnown RBP6.97□□□□□ -1.29
COL21A1-201ENST00000244728 SS18Q15532 418 aa6.97□□□□□ -1.29
COL21A1-201ENST00000244728 ICOSQ9Y6W8 199 aa6.97□□□□□ -1.29
COL21A1-201ENST00000244728 AVPP01185 164 aa6.96□□□□□ -1.29
COL21A1-201ENST00000244728 MED14OSP0DP75 135 aa6.96□□□□□ -1.29
COL21A1-201ENST00000244728 C5orf38Q86SI9 138 aa6.96□□□□□ -1.29
COL21A1-201ENST00000244728 ZFAND2AQ8N6M9 145 aa6.96□□□□□ -1.29
COL21A1-201ENST00000244728 ZNF843Q8N446 348 aa6.96□□□□□ -1.3
COL21A1-201ENST00000244728 CLEC2BQ92478 149 aa6.96□□□□□ -1.3
COL21A1-201ENST00000244728 MUC4Q99102 2169 aa6.96□□□□□ -1.3
COL21A1-201ENST00000244728 TRBV10-2A0A0K0K1G8 114 aa6.95□□□□□ -1.3
COL21A1-201ENST00000244728 TEX49A0A1B0GTD5 131 aa6.95□□□□□ -1.3
COL21A1-201ENST00000244728 XCL1P47992 114 aa6.95□□□□□ -1.3
COL21A1-201ENST00000244728 IGLV10-54A0A075B6I4 117 aa6.95□□□□□ -1.3
COL21A1-201ENST00000244728 P0DMU3 169 aa6.95□□□□□ -1.3
COL21A1-201ENST00000244728 FAM231AP0DMU4 169 aa6.95□□□□□ -1.3
COL21A1-201ENST00000244728 FAM231CP0DMU5 169 aa6.95□□□□□ -1.3
COL21A1-201ENST00000244728 KRTAP10-9P60411 292 aa6.95□□□□□ -1.3
COL21A1-201ENST00000244728 SPANXA1Q9NS26 97 aa6.95□□□□□ -1.3
COL21A1-201ENST00000244728 DNAJC9-AS1A6NH13 148 aa6.95□□□□□ -1.3
COL21A1-201ENST00000244728 K7EMT4 169 aa6.95□□□□□ -1.3
COL21A1-201ENST00000244728 CEMP1Q6PRD7 247 aaPredicted RBP6.95□□□□□ -1.3
COL21A1-201ENST00000244728 A0A0J9YX75 114 aa6.95□□□□□ -1.3
COL21A1-201ENST00000244728 F8W735 103 aaPredicted RBP6.95□□□□□ -1.3
COL21A1-201ENST00000244728 PRM2P04554 102 aa6.95□□□□□ -1.3
COL21A1-201ENST00000244728 C20orf203Q8NBC4 194 aa6.95□□□□□ -1.3
COL21A1-201ENST00000244728 IGHG4P01861 327 aa6.94□□□□□ -1.3
COL21A1-201ENST00000244728 IGHV3-30-3P0DP02 117 aa6.94□□□□□ -1.3
COL21A1-201ENST00000244728 IGHV4-31P0DP07 118 aa6.94□□□□□ -1.3
COL21A1-201ENST00000244728 UBE2DNLQ8IWF7 75 aa6.94□□□□□ -1.3
COL21A1-201ENST00000244728 RS1O15537 224 aa6.94□□□□□ -1.3
COL21A1-201ENST00000244728 EBI3Q14213 229 aa6.94□□□□□ -1.3
COL21A1-201ENST00000244728 Q9H8V8 135 aa6.94□□□□□ -1.3
COL21A1-201ENST00000244728 PCSK5Q92824 1860 aa6.94□□□□□ -1.3
COL21A1-201ENST00000244728 NDUFV3P56181 108 aaKnown RBP6.94□□□□□ -1.3
COL21A1-201ENST00000244728 IGHV3-33P01772 117 aa6.93□□□□□ -1.3
COL21A1-201ENST00000244728 HIST1H4AP62805 103 aaKnown RBP6.93□□□□□ -1.3
COL21A1-201ENST00000244728 DEFB135Q30KP9 77 aa6.93□□□□□ -1.3
COL21A1-201ENST00000244728 IGLV2-18A0A075B6J9 118 aa6.93□□□□□ -1.3
COL21A1-201ENST00000244728 IGHV3-30P01768 117 aa6.93□□□□□ -1.3
COL21A1-201ENST00000244728 IGHV3-30-5P0DP03 117 aa6.93□□□□□ -1.3
COL21A1-201ENST00000244728 COX8CQ7Z4L0 72 aa6.93□□□□□ -1.3
COL21A1-201ENST00000244728 A0A0J9YXY3 114 aa6.93□□□□□ -1.3
COL21A1-201ENST00000244728 INAFM2P0DMQ5 153 aa6.92□□□□□ -1.3
COL21A1-201ENST00000244728 IGHV4-4A0A075B6R2 117 aa6.92□□□□□ -1.3
COL21A1-201ENST00000244728 A0A0B4J2C4 111 aa6.92□□□□□ -1.3
COL21A1-201ENST00000244728 FAM236AA0A1B0GUQ0 79 aa6.92□□□□□ -1.3
COL21A1-201ENST00000244728 FAM236BA0A1B0GV22 79 aa6.92□□□□□ -1.3
COL21A1-201ENST00000244728 CLPSL1A2RUU4 121 aa6.92□□□□□ -1.3
COL21A1-201ENST00000244728 C18orf65Q6ZTR6 163 aa6.92□□□□□ -1.3
COL21A1-201ENST00000244728 RNASE3P12724 160 aaKnown RBP6.92□□□□□ -1.3
COL21A1-201ENST00000244728 GYPEP15421 78 aa6.92□□□□□ -1.3
COL21A1-201ENST00000244728 ZNF22P17026 224 aaPredicted RBP6.92□□□□□ -1.3
COL21A1-201ENST00000244728 UBE2D1P51668 147 aa6.92□□□□□ -1.3
COL21A1-201ENST00000244728 Q8N6K4 173 aa6.92□□□□□ -1.3
COL21A1-201ENST00000244728 H3BT86 120 aa6.91□□□□□ -1.3
COL21A1-201ENST00000244728 PSCAO43653 123 aa6.91□□□□□ -1.3
COL21A1-201ENST00000244728 BAALC-AS2P0C853 105 aa6.91□□□□□ -1.3
COL21A1-201ENST00000244728 APOC4P55056 127 aa6.91□□□□□ -1.3
COL21A1-201ENST00000244728 NFE4Q86UQ8 179 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms