RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 VCX2Q9H322 139 aa11.72□□□□□ -0.53
UBE3D-201ENST00000237186 A0A1W2PRX2 142 aa11.72□□□□□ -0.53
UBE3D-201ENST00000237186 IGLL5B9A064 214 aa11.72□□□□□ -0.53
UBE3D-201ENST00000237186 RBX1P62877 108 aa11.72□□□□□ -0.53
UBE3D-201ENST00000237186 SCGB1D4Q6XE38 83 aa11.72□□□□□ -0.53
UBE3D-201ENST00000237186 FAM104AQ969W3 186 aa11.72□□□□□ -0.53
UBE3D-201ENST00000237186 PLEKHB2Q96CS7 222 aa11.72□□□□□ -0.53
UBE3D-201ENST00000237186 AMELXQ99217 191 aa11.72□□□□□ -0.53
UBE3D-201ENST00000237186 A0A0J9YY99 117 aa11.71□□□□□ -0.53
UBE3D-201ENST00000237186 TMEM223A0PJW6 202 aa11.71□□□□□ -0.53
UBE3D-201ENST00000237186 XCL2Q9UBD3 114 aa11.71□□□□□ -0.53
UBE3D-201ENST00000237186 OCIAD2Q56VL3 154 aa11.7□□□□□ -0.54
UBE3D-201ENST00000237186 SPANXB1Q9NS25 103 aaPredicted RBP11.7□□□□□ -0.54
UBE3D-201ENST00000237186 AZU1P20160 251 aa11.7□□□□□ -0.54
UBE3D-201ENST00000237186 TSPEAR-AS2P59090 65 aa11.7□□□□□ -0.54
UBE3D-201ENST00000237186 FAM110AQ9BQ89 295 aa11.7□□□□□ -0.54
UBE3D-201ENST00000237186 MRPL16Q9NX20 251 aaKnown RBP11.7□□□□□ -0.54
UBE3D-201ENST00000237186 CBY1Q9Y3M2 126 aa11.7□□□□□ -0.54
UBE3D-201ENST00000237186 J3QQQ9 107 aa11.69□□□□□ -0.54
UBE3D-201ENST00000237186 CHCHD7Q9BUK0 85 aa11.69□□□□□ -0.54
UBE3D-201ENST00000237186 Q9UF83 564 aa11.69□□□□□ -0.54
UBE3D-201ENST00000237186 TMEM238LA0A1B0GVL6 79 aa11.68□□□□□ -0.54
UBE3D-201ENST00000237186 A6NJY4 79 aa11.68□□□□□ -0.54
UBE3D-201ENST00000237186 LEPROTO15243 131 aa11.68□□□□□ -0.54
UBE3D-201ENST00000237186 ZNF22P17026 224 aaPredicted RBP11.68□□□□□ -0.54
UBE3D-201ENST00000237186 HILS1P60008 231 aa11.68□□□□□ -0.54
UBE3D-201ENST00000237186 SLC25A29Q8N8R3 303 aa11.68□□□□□ -0.54
UBE3D-201ENST00000237186 SMR3AQ99954 134 aa11.68□□□□□ -0.54
UBE3D-201ENST00000237186 SPANXA1Q9NS26 97 aa11.68□□□□□ -0.54
UBE3D-201ENST00000237186 NOTCH2Q04721 2471 aa11.68□□□□□ -0.54
UBE3D-201ENST00000237186 UBE2D1P51668 147 aa11.68□□□□□ -0.54
UBE3D-201ENST00000237186 MRPS36P82909 103 aaKnown RBP11.68□□□□□ -0.54
UBE3D-201ENST00000237186 NDUFA7O95182 113 aa11.67□□□□□ -0.54
UBE3D-201ENST00000237186 SRSF9Q13242 221 aaKnown RBP eCLIP11.67□□□□□ -0.54
UBE3D-201ENST00000237186 RRN3P1Q2M238 152 aa11.67□□□□□ -0.54
UBE3D-201ENST00000237186 ZNF418Q8TF45 676 aaPredicted RBP11.67□□□□□ -0.54
UBE3D-201ENST00000237186 ZNF479Q96JC4 524 aa11.67□□□□□ -0.54
UBE3D-201ENST00000237186 A0A0J9YXV3 536 aa11.66□□□□□ -0.54
UBE3D-201ENST00000237186 IGLV1-51P01701 117 aa11.66□□□□□ -0.54
UBE3D-201ENST00000237186 UBE2D4Q9Y2X8 147 aa11.66□□□□□ -0.54
UBE3D-201ENST00000237186 LGALS3P17931 250 aaKnown RBP11.66□□□□□ -0.54
UBE3D-201ENST00000237186 NF1P21359 2839 aa11.65□□□□□ -0.54
UBE3D-201ENST00000237186 CUBNO60494 3623 aa11.65□□□□□ -0.54
UBE3D-201ENST00000237186 ADARB2-AS1A8MUL3 147 aa11.65□□□□□ -0.54
UBE3D-201ENST00000237186 TMEM263Q8WUH6 116 aaKnown RBP11.65□□□□□ -0.54
UBE3D-201ENST00000237186 K7ERU9 68 aa11.64□□□□□ -0.55
UBE3D-201ENST00000237186 SAP30O75446 220 aa11.64□□□□□ -0.55
UBE3D-201ENST00000237186 MTORP42345 2549 aa11.64□□□□□ -0.55
UBE3D-201ENST00000237186 LY6G6DO95868 133 aa11.63□□□□□ -0.55
UBE3D-201ENST00000237186 IGHV3-30P01768 117 aa11.63□□□□□ -0.55
UBE3D-201ENST00000237186 GIG44P09565 113 aaPredicted RBP11.63□□□□□ -0.55
UBE3D-201ENST00000237186 IGHV3-30-5P0DP03 117 aa11.63□□□□□ -0.55
UBE3D-201ENST00000237186 COTL1Q14019 142 aa11.63□□□□□ -0.55
UBE3D-201ENST00000237186 C19orf73Q9NVV2 129 aa11.63□□□□□ -0.55
UBE3D-201ENST00000237186 TRBV10-1A0A0K0K1A3 114 aa11.63□□□□□ -0.55
UBE3D-201ENST00000237186 NACAE9PAV3 2078 aa11.62□□□□□ -0.55
UBE3D-201ENST00000237186 IGHV3OR16-12A0A075B7B8 117 aa11.62□□□□□ -0.55
UBE3D-201ENST00000237186 TINCRA0A1B0GVN0 87 aa11.62□□□□□ -0.55
UBE3D-201ENST00000237186 DAZ2Q13117 558 aaKnown RBP11.62□□□□□ -0.55
UBE3D-201ENST00000237186 CEMP1Q6PRD7 247 aaPredicted RBP11.62□□□□□ -0.55
UBE3D-201ENST00000237186 TIMM21Q9BVV7 248 aa11.62□□□□□ -0.55
UBE3D-201ENST00000237186 TRGV1A0A0A0MS02 117 aa11.61□□□□□ -0.55
UBE3D-201ENST00000237186 HIVEP2P31629 2446 aa11.61□□□□□ -0.55
UBE3D-201ENST00000237186 TRAV4A0A0B4J268 109 aa11.61□□□□□ -0.55
UBE3D-201ENST00000237186 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.6□□□□□ -0.55
UBE3D-201ENST00000237186 IGKV2-29A2NJV5 120 aaPredicted RBP11.6□□□□□ -0.55
UBE3D-201ENST00000237186 F8W1H4 67 aa11.59□□□□□ -0.55
UBE3D-201ENST00000237186 NDUFA11Q86Y39 141 aa11.59□□□□□ -0.55
UBE3D-201ENST00000237186 PGPEP1Q9NXJ5 209 aa11.59□□□□□ -0.55
UBE3D-201ENST00000237186 OTOGQ6ZRI0 2925 aa11.59□□□□□ -0.55
UBE3D-201ENST00000237186 IGHV3-38A0A0C4DH36 116 aa11.59□□□□□ -0.55
UBE3D-201ENST00000237186 IGHV1-58A0A0C4DH39 117 aa11.59□□□□□ -0.55
UBE3D-201ENST00000237186 IGHV3-30-3P0DP02 117 aa11.59□□□□□ -0.55
UBE3D-201ENST00000237186 Q6ZTI0 123 aa11.59□□□□□ -0.55
UBE3D-201ENST00000237186 C1QTNF4Q9BXJ3 329 aa11.59□□□□□ -0.55
UBE3D-201ENST00000237186 CIDEAO60543 219 aa11.58□□□□□ -0.56
UBE3D-201ENST00000237186 Q6ZUT4 128 aa11.58□□□□□ -0.56
UBE3D-201ENST00000237186 CSNK1G2-AS1Q8NCQ2 148 aa11.58□□□□□ -0.56
UBE3D-201ENST00000237186 WNK1Q9H4A3 2382 aa11.58□□□□□ -0.56
UBE3D-201ENST00000237186 PLAC8L1A1L4L8 177 aa11.57□□□□□ -0.56
UBE3D-201ENST00000237186 K7EQD1 137 aa11.57□□□□□ -0.56
UBE3D-201ENST00000237186 TIRAPP58753 221 aa11.57□□□□□ -0.56
UBE3D-201ENST00000237186 RPL36AP83881 106 aaKnown RBP11.57□□□□□ -0.56
UBE3D-201ENST00000237186 DAZ4Q86SG3 579 aaKnown RBP11.57□□□□□ -0.56
UBE3D-201ENST00000237186 C10orf126Q8N4M7 172 aa11.57□□□□□ -0.56
UBE3D-201ENST00000237186 RPL36ALQ969Q0 106 aaKnown RBP11.57□□□□□ -0.56
UBE3D-201ENST00000237186 C16orf74Q96GX8 76 aa11.57□□□□□ -0.56
UBE3D-201ENST00000237186 DAZ3Q9NR90 486 aaKnown RBP11.57□□□□□ -0.56
UBE3D-201ENST00000237186 CFC1BP0CG36 223 aa11.57□□□□□ -0.56
UBE3D-201ENST00000237186 CFC1P0CG37 223 aa11.57□□□□□ -0.56
UBE3D-201ENST00000237186 OVOL2Q9BRP0 275 aa11.57□□□□□ -0.56
UBE3D-201ENST00000237186 CSDC2Q9Y534 153 aaKnown RBP11.57□□□□□ -0.56
UBE3D-201ENST00000237186 IGLV5-45A0A087WSX0 123 aa11.56□□□□□ -0.56
UBE3D-201ENST00000237186 A0A0J9YXY3 114 aa11.56□□□□□ -0.56
UBE3D-201ENST00000237186 TSPAN13O95857 204 aa11.56□□□□□ -0.56
UBE3D-201ENST00000237186 RNASE13Q5GAN3 156 aaKnown RBP11.56□□□□□ -0.56
UBE3D-201ENST00000237186 VSIG2Q96IQ7 327 aa11.56□□□□□ -0.56
UBE3D-201ENST00000237186 IGHV3-64A0A075B6Q5 118 aa11.55□□□□□ -0.56
UBE3D-201ENST00000237186 TMEM238C9JI98 176 aa11.55□□□□□ -0.56
UBE3D-201ENST00000237186 G3V4G9 280 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms