RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 IGHV1-24A0A0C4DH33 117 aa7.65□□□□□ -1.18
SF3B6-201ENST00000233468 IGHV3-30P01768 117 aa7.65□□□□□ -1.18
SF3B6-201ENST00000233468 IGHV3-33P01772 117 aa7.65□□□□□ -1.18
SF3B6-201ENST00000233468 IGHV3-30-3P0DP02 117 aa7.65□□□□□ -1.18
SF3B6-201ENST00000233468 IGHV3-30-5P0DP03 117 aa7.65□□□□□ -1.18
SF3B6-201ENST00000233468 COTL1Q14019 142 aa7.65□□□□□ -1.18
SF3B6-201ENST00000233468 LAGE3Q14657 143 aa7.65□□□□□ -1.18
SF3B6-201ENST00000233468 NDUFA5Q16718 116 aa7.65□□□□□ -1.18
SF3B6-201ENST00000233468 CHCHD5Q9BSY4 110 aa7.65□□□□□ -1.18
SF3B6-201ENST00000233468 TRAV8-3A0A0A6YYJ7 113 aa7.64□□□□□ -1.19
SF3B6-201ENST00000233468 TRAV26-2A0A0B4J265 109 aa7.64□□□□□ -1.19
SF3B6-201ENST00000233468 IBA57-AS1B1ANH7 110 aa7.64□□□□□ -1.19
SF3B6-201ENST00000233468 NCR2O95944 276 aa7.64□□□□□ -1.19
SF3B6-201ENST00000233468 RAB4AP20338 218 aa7.64□□□□□ -1.19
SF3B6-201ENST00000233468 IQCJQ1A5X6 159 aa7.64□□□□□ -1.19
SF3B6-201ENST00000233468 FAM104BQ5XKR9 115 aa7.64□□□□□ -1.19
SF3B6-201ENST00000233468 MRPL54Q6P161 138 aaKnown RBP7.64□□□□□ -1.19
SF3B6-201ENST00000233468 NIT1Q86X76 327 aa7.64□□□□□ -1.19
SF3B6-201ENST00000233468 AMN1Q8IY45 258 aa7.64□□□□□ -1.19
SF3B6-201ENST00000233468 BTF3L4Q96K17 158 aa7.64□□□□□ -1.19
SF3B6-201ENST00000233468 KRTAP1-5Q9BYS1 174 aa7.64□□□□□ -1.19
SF3B6-201ENST00000233468 ST20Q9HBF5 79 aa7.64□□□□□ -1.19
SF3B6-201ENST00000233468 DNAH11Q96DT5 4516 aa7.63□□□□□ -1.19
SF3B6-201ENST00000233468 TRBV6-5A0A0K0K1A5 114 aa7.63□□□□□ -1.19
SF3B6-201ENST00000233468 UBE2L6O14933 153 aa7.63□□□□□ -1.19
SF3B6-201ENST00000233468 ADCYAP1P18509 176 aa7.63□□□□□ -1.19
SF3B6-201ENST00000233468 S100PP25815 95 aa7.63□□□□□ -1.19
SF3B6-201ENST00000233468 RMI2Q96E14 147 aa7.63□□□□□ -1.19
SF3B6-201ENST00000233468 TMEM243Q9BU79 118 aa7.63□□□□□ -1.19
SF3B6-201ENST00000233468 TM2D2Q9BX73 214 aa7.63□□□□□ -1.19
SF3B6-201ENST00000233468 COX11Q9Y6N1 276 aa7.63□□□□□ -1.19
SF3B6-201ENST00000233468 TRAV9-1A0A075B6T8 112 aa7.62□□□□□ -1.19
SF3B6-201ENST00000233468 SDHAF1A6NFY7 115 aa7.62□□□□□ -1.19
SF3B6-201ENST00000233468 I3L3M4 83 aa7.62□□□□□ -1.19
SF3B6-201ENST00000233468 PPBPP02775 128 aa7.62□□□□□ -1.19
SF3B6-201ENST00000233468 PMCHP20382 165 aa7.62□□□□□ -1.19
SF3B6-201ENST00000233468 CKS2P33552 79 aa7.62□□□□□ -1.19
SF3B6-201ENST00000233468 Q0VG73 95 aa7.62□□□□□ -1.19
SF3B6-201ENST00000233468 RHEBQ15382 184 aa7.62□□□□□ -1.19
SF3B6-201ENST00000233468 RNF185Q96GF1 192 aa7.62□□□□□ -1.19
SF3B6-201ENST00000233468 TMEM242Q9NWH2 141 aa7.62□□□□□ -1.19
SF3B6-201ENST00000233468 CARHSP1Q9Y2V2 147 aaKnown RBP7.62□□□□□ -1.19
SF3B6-201ENST00000233468 A0A1B0GXF2 115 aa7.61□□□□□ -1.19
SF3B6-201ENST00000233468 VCYO14598 125 aa7.61□□□□□ -1.19
SF3B6-201ENST00000233468 PSCAO43653 123 aa7.61□□□□□ -1.19
SF3B6-201ENST00000233468 CRPP02741 224 aa7.61□□□□□ -1.19
SF3B6-201ENST00000233468 AMTP48728 403 aa7.61□□□□□ -1.19
SF3B6-201ENST00000233468 C10orf91Q5T1B1 145 aa7.61□□□□□ -1.19
SF3B6-201ENST00000233468 RPL39LQ96EH5 51 aaKnown RBP7.61□□□□□ -1.19
SF3B6-201ENST00000233468 TCAPO15273 167 aa7.6□□□□□ -1.19
SF3B6-201ENST00000233468 APCSP02743 223 aa7.6□□□□□ -1.19
SF3B6-201ENST00000233468 MRPL51Q4U2R6 128 aaKnown RBP7.6□□□□□ -1.19
SF3B6-201ENST00000233468 NTM-AS1Q6ZSK4 140 aa7.6□□□□□ -1.19
SF3B6-201ENST00000233468 KIR2DL4Q99706 377 aa7.6□□□□□ -1.19
SF3B6-201ENST00000233468 C20orf78Q9BR46 151 aa7.6□□□□□ -1.19
SF3B6-201ENST00000233468 TRBV27A0A0K0K1C4 114 aa7.59□□□□□ -1.19
SF3B6-201ENST00000233468 H7C423 109 aa7.59□□□□□ -1.19
SF3B6-201ENST00000233468 PHOX2AO14813 284 aa7.59□□□□□ -1.19
SF3B6-201ENST00000233468 SNAPINO95295 136 aa7.59□□□□□ -1.19
SF3B6-201ENST00000233468 SUMO2P61956 95 aaKnown RBP7.59□□□□□ -1.19
SF3B6-201ENST00000233468 SMAGPQ0VAQ4 97 aa7.59□□□□□ -1.19
SF3B6-201ENST00000233468 GAGE6Q13070 117 aa7.59□□□□□ -1.19
SF3B6-201ENST00000233468 SVBPQ8N300 66 aa7.59□□□□□ -1.19
SF3B6-201ENST00000233468 CLRN3Q8NCR9 226 aa7.59□□□□□ -1.19
SF3B6-201ENST00000233468 TMEM70Q9BUB7 260 aa7.59□□□□□ -1.19
SF3B6-201ENST00000233468 Q9HAA7 133 aa7.59□□□□□ -1.19
SF3B6-201ENST00000233468 KLK12Q9UKR0 248 aa7.59□□□□□ -1.19
SF3B6-201ENST00000233468 HSPG2P98160 4391 aa7.59□□□□□ -1.19
SF3B6-201ENST00000233468 TRBV24-1A0A075B6N3 115 aa7.58□□□□□ -1.2
SF3B6-201ENST00000233468 A0A1B0GUV1 79 aa7.58□□□□□ -1.2
SF3B6-201ENST00000233468 C7orf77A4D0Y5 90 aa7.58□□□□□ -1.2
SF3B6-201ENST00000233468 APOC3P02656 99 aa7.58□□□□□ -1.2
SF3B6-201ENST00000233468 ANGP03950 147 aaKnown RBP7.58□□□□□ -1.2
SF3B6-201ENST00000233468 FCER1GP30273 86 aa7.58□□□□□ -1.2
SF3B6-201ENST00000233468 POLR2KP53803 58 aaKnown RBP7.58□□□□□ -1.2
SF3B6-201ENST00000233468 COX19Q49B96 90 aa7.58□□□□□ -1.2
SF3B6-201ENST00000233468 ATRAIDQ6UW56 229 aa7.58□□□□□ -1.2
SF3B6-201ENST00000233468 Q6ZRN7 208 aaPredicted RBP7.58□□□□□ -1.2
SF3B6-201ENST00000233468 ORMDL3Q8N138 153 aa7.58□□□□□ -1.2
SF3B6-201ENST00000233468 UBE2WQ96B02 151 aa7.58□□□□□ -1.2
SF3B6-201ENST00000233468 RPS10P5Q9NQ39 176 aa7.58□□□□□ -1.2
SF3B6-201ENST00000233468 LAMTOR2Q9Y2Q5 125 aa7.58□□□□□ -1.2
SF3B6-201ENST00000233468 D6R8Y8 96 aa7.57□□□□□ -1.2
SF3B6-201ENST00000233468 SMKR1H3BMG3 65 aa7.57□□□□□ -1.2
SF3B6-201ENST00000233468 RPS10P46783 165 aaKnown RBP7.57□□□□□ -1.2
SF3B6-201ENST00000233468 RBX1P62877 108 aa7.57□□□□□ -1.2
SF3B6-201ENST00000233468 RPL32P62910 135 aaKnown RBP7.57□□□□□ -1.2
SF3B6-201ENST00000233468 MPV17L2Q567V2 206 aa7.57□□□□□ -1.2
SF3B6-201ENST00000233468 AMMECR1LQ6DCA0 310 aa7.57□□□□□ -1.2
SF3B6-201ENST00000233468 TMEM136Q6ZRR5 245 aa7.57□□□□□ -1.2
SF3B6-201ENST00000233468 NRACQ8N912 160 aa7.57□□□□□ -1.2
SF3B6-201ENST00000233468 TNFRSF6BO95407 300 aa7.56□□□□□ -1.2
SF3B6-201ENST00000233468 MIAQ16674 131 aa7.56□□□□□ -1.2
SF3B6-201ENST00000233468 TMEM18Q96B42 140 aa7.56□□□□□ -1.2
SF3B6-201ENST00000233468 TMEM101Q96IK0 257 aa7.56□□□□□ -1.2
SF3B6-201ENST00000233468 C1orf43Q9BWL3 253 aa7.56□□□□□ -1.2
SF3B6-201ENST00000233468 IGKV2D-24A0A075B6R9 120 aa7.55□□□□□ -1.2
SF3B6-201ENST00000233468 GAS8-AS1O95177 125 aa7.55□□□□□ -1.2
SF3B6-201ENST00000233468 ZNF25P17030 456 aaPredicted RBP7.55□□□□□ -1.2
SF3B6-201ENST00000233468 RNASEKQ6P5S7 137 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms