RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CDSNQ15517 529 aa9.58□□□□□ -0.88
MSH2-201ENST00000233146 C20orf203Q8NBC4 194 aa9.58□□□□□ -0.88
MSH2-201ENST00000233146 NCOR2Q9Y618 2525 aa9.58□□□□□ -0.88
MSH2-201ENST00000233146 H7BZZ5 65 aa9.57□□□□□ -0.88
MSH2-201ENST00000233146 PRB3Q04118 309 aaPredicted RBP9.57□□□□□ -0.88
MSH2-201ENST00000233146 IGHV3-66A0A0C4DH42 116 aa9.57□□□□□ -0.88
MSH2-201ENST00000233146 RBMY1BA6NDE4 496 aaKnown RBP9.57□□□□□ -0.88
MSH2-201ENST00000233146 RBMY1EA6NEQ0 496 aaKnown RBP9.57□□□□□ -0.88
MSH2-201ENST00000233146 RBMY1DP0C7P1 496 aaKnown RBP9.57□□□□□ -0.88
MSH2-201ENST00000233146 RBMY1A1P0DJD3 496 aaKnown RBP9.57□□□□□ -0.88
MSH2-201ENST00000233146 RBMY1CP0DJD4 496 aa9.57□□□□□ -0.88
MSH2-201ENST00000233146 RBMY1FQ15415 496 aaKnown RBP9.57□□□□□ -0.88
MSH2-201ENST00000233146 C20orf197Q8N268 126 aa9.57□□□□□ -0.88
MSH2-201ENST00000233146 A8MZ25 164 aa9.57□□□□□ -0.88
MSH2-201ENST00000233146 SPTAN1Q13813 2472 aaKnown RBP9.57□□□□□ -0.88
MSH2-201ENST00000233146 A0A0U1RQV1 116 aa9.56□□□□□ -0.88
MSH2-201ENST00000233146 NBR2O15453 112 aa9.56□□□□□ -0.88
MSH2-201ENST00000233146 NUP37Q8NFH4 326 aa9.56□□□□□ -0.88
MSH2-201ENST00000233146 RNASE6Q93091 150 aaKnown RBP9.56□□□□□ -0.88
MSH2-201ENST00000233146 OBSCN-AS1Q96MR7 158 aa9.56□□□□□ -0.88
MSH2-201ENST00000233146 KNCNA6PVL3 124 aa9.55□□□□□ -0.88
MSH2-201ENST00000233146 RPL28P46779 137 aaKnown RBP9.55□□□□□ -0.88
MSH2-201ENST00000233146 LYPD5Q6UWN5 251 aa9.55□□□□□ -0.88
MSH2-201ENST00000233146 LINC00308Q8TCZ7 52 aa9.55□□□□□ -0.88
MSH2-201ENST00000233146 F5H697 171 aa9.55□□□□□ -0.88
MSH2-201ENST00000233146 C9orf129Q5T035 196 aaKnown RBP9.55□□□□□ -0.88
MSH2-201ENST00000233146 FAM104AQ969W3 186 aa9.55□□□□□ -0.88
MSH2-201ENST00000233146 C14orf132Q9NPU4 83 aa9.55□□□□□ -0.88
MSH2-201ENST00000233146 HILS1P60008 231 aa9.54□□□□□ -0.88
MSH2-201ENST00000233146 BRK1Q8WUW1 75 aa9.54□□□□□ -0.88
MSH2-201ENST00000233146 Q9HAA7 133 aa9.54□□□□□ -0.88
MSH2-201ENST00000233146 A0A087WWL8 130 aa9.54□□□□□ -0.88
MSH2-201ENST00000233146 TRBV12-3P01733 135 aa9.54□□□□□ -0.88
MSH2-201ENST00000233146 RPL11P62913 178 aaKnown RBP9.54□□□□□ -0.88
MSH2-201ENST00000233146 CIRBPQ14011 172 aaKnown RBP9.54□□□□□ -0.88
MSH2-201ENST00000233146 NPBQ8NG41 125 aa9.54□□□□□ -0.88
MSH2-201ENST00000233146 COL12A1Q99715 3063 aa9.54□□□□□ -0.88
MSH2-201ENST00000233146 IGHV3OR16-13A0A075B7E8 117 aa9.53□□□□□ -0.88
MSH2-201ENST00000233146 IGHV3-74A0A0B4J1X5 117 aa9.53□□□□□ -0.88
MSH2-201ENST00000233146 PATE3B3GLJ2 98 aa9.53□□□□□ -0.88
MSH2-201ENST00000233146 ITLN2Q8WWU7 325 aaPredicted RBP9.53□□□□□ -0.88
MSH2-201ENST00000233146 DMXL2Q8TDJ6 3036 aa9.52□□□□□ -0.88
MSH2-201ENST00000233146 NDPQ00604 133 aa9.52□□□□□ -0.89
MSH2-201ENST00000233146 C20orf173Q96LM9 149 aa9.52□□□□□ -0.89
MSH2-201ENST00000233146 LY6G5BQ8NDX9 201 aa9.52□□□□□ -0.89
MSH2-201ENST00000233146 IGF2RP11717 2491 aa9.52□□□□□ -0.89
MSH2-201ENST00000233146 NDUFA1O15239 70 aa9.51□□□□□ -0.89
MSH2-201ENST00000233146 TRAV23DV6A0A075B6W5 121 aa9.51□□□□□ -0.89
MSH2-201ENST00000233146 M0QY20 66 aa9.51□□□□□ -0.89
MSH2-201ENST00000233146 KAAG1Q9UBP8 84 aa9.51□□□□□ -0.89
MSH2-201ENST00000233146 SMG1Q96Q15 3661 aaKnown RBP9.51□□□□□ -0.89
MSH2-201ENST00000233146 APRG1Q8IVJ8 170 aa9.51□□□□□ -0.89
MSH2-201ENST00000233146 COX7A1P24310 79 aa9.5□□□□□ -0.89
MSH2-201ENST00000233146 LINC00482Q8N8I6 264 aa9.5□□□□□ -0.89
MSH2-201ENST00000233146 OTOGLQ3ZCN5 2332 aa9.5□□□□□ -0.89
MSH2-201ENST00000233146 SPENQ96T58 3664 aaKnown RBP9.5□□□□□ -0.89
MSH2-201ENST00000233146 CD28P10747 220 aa9.5□□□□□ -0.89
MSH2-201ENST00000233146 SOSTDC1Q6X4U4 206 aa9.5□□□□□ -0.89
MSH2-201ENST00000233146 WNK2Q9Y3S1 2297 aa9.49□□□□□ -0.89
MSH2-201ENST00000233146 IGHV3-49A0A0A0MS15 119 aa9.49□□□□□ -0.89
MSH2-201ENST00000233146 PRO3102Q9H379 93 aa9.49□□□□□ -0.89
MSH2-201ENST00000233146 LINC00474Q9P2X8 69 aa9.49□□□□□ -0.89
MSH2-201ENST00000233146 CCL17Q92583 94 aa9.49□□□□□ -0.89
MSH2-201ENST00000233146 APC2O95996 2303 aa9.49□□□□□ -0.89
MSH2-201ENST00000233146 ATMQ13315 3056 aa9.48□□□□□ -0.89
MSH2-201ENST00000233146 COPS9Q8WXC6 57 aa9.48□□□□□ -0.89
MSH2-201ENST00000233146 U3KQE9 123 aa9.48□□□□□ -0.89
MSH2-201ENST00000233146 KLKP1Q107X0 134 aa9.48□□□□□ -0.89
MSH2-201ENST00000233146 HOXD3P31249 432 aaPredicted RBP9.48□□□□□ -0.89
MSH2-201ENST00000233146 ATP5EP2Q5VTU8 51 aa9.48□□□□□ -0.89
MSH2-201ENST00000233146 PIEZO1Q92508 2521 aa9.47□□□□□ -0.89
MSH2-201ENST00000233146 HIST2H2BCQ6DN03 193 aa9.47□□□□□ -0.89
MSH2-201ENST00000233146 HIST2H2BDQ6DRA6 164 aa9.47□□□□□ -0.89
MSH2-201ENST00000233146 FAM110DQ8TAY7 271 aaPredicted RBP9.47□□□□□ -0.89
MSH2-201ENST00000233146 POLEQ07864 2286 aa9.46□□□□□ -0.89
MSH2-201ENST00000233146 CCKP06307 115 aa9.46□□□□□ -0.89
MSH2-201ENST00000233146 FAM74A4Q5TZK3 123 aa9.46□□□□□ -0.89
MSH2-201ENST00000233146 NBL1P41271 181 aa9.46□□□□□ -0.9
MSH2-201ENST00000233146 FAM19A1Q7Z5A9 133 aa9.46□□□□□ -0.9
MSH2-201ENST00000233146 WFDC9Q8NEX5 89 aa9.46□□□□□ -0.9
MSH2-201ENST00000233146 OVOL2Q9BRP0 275 aa9.46□□□□□ -0.9
MSH2-201ENST00000233146 TRBV7-6A0A0J9YX20 115 aa9.46□□□□□ -0.9
MSH2-201ENST00000233146 C15orf32Q32M92 178 aa9.46□□□□□ -0.9
MSH2-201ENST00000233146 IL17DQ8TAD2 202 aa9.46□□□□□ -0.9
MSH2-201ENST00000233146 TRAV7A0A075B6U4 112 aa9.45□□□□□ -0.9
MSH2-201ENST00000233146 BCE1O60756 84 aa9.45□□□□□ -0.9
MSH2-201ENST00000233146 ATRXP46100 2492 aa9.45□□□□□ -0.9
MSH2-201ENST00000233146 DEFB1P60022 68 aa9.45□□□□□ -0.9
MSH2-201ENST00000233146 ZNF625Q96I27 306 aaPredicted RBP9.45□□□□□ -0.9
MSH2-201ENST00000233146 SOCS3O14543 225 aa9.45□□□□□ -0.9
MSH2-201ENST00000233146 RNASE13Q5GAN3 156 aaKnown RBP9.45□□□□□ -0.9
MSH2-201ENST00000233146 S100A7L2Q5SY68 101 aa9.45□□□□□ -0.9
MSH2-201ENST00000233146 COL6A6A6NMZ7 2263 aa9.45□□□□□ -0.9
MSH2-201ENST00000233146 CSMD1Q96PZ7 3565 aa9.44□□□□□ -0.9
MSH2-201ENST00000233146 C6orf226Q5I0X4 101 aa9.44□□□□□ -0.9
MSH2-201ENST00000233146 A0A087WYN8 130 aa9.43□□□□□ -0.9
MSH2-201ENST00000233146 TRBV10-3A0A0K0K1G6 114 aa9.43□□□□□ -0.9
MSH2-201ENST00000233146 C22orf34Q6ZV56 151 aa9.43□□□□□ -0.9
MSH2-201ENST00000233146 ABCA4P78363 2273 aa9.43□□□□□ -0.9
MSH2-201ENST00000233146 A0A0U1RRA0 63 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms