RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 NBASA2RRP1 2371 aa10.05□□□□□ -0.8
NEK4-201ENST00000233027 C19orf84I3L1E1 186 aa10.04□□□□□ -0.8
NEK4-201ENST00000233027 NDUFV3P56181 108 aaKnown RBP10.04□□□□□ -0.8
NEK4-201ENST00000233027 LINC00643Q86TS7 51 aa10.04□□□□□ -0.8
NEK4-201ENST00000233027 FREM1Q5H8C1 2179 aa10.04□□□□□ -0.8
NEK4-201ENST00000233027 ZNF22P17026 224 aaPredicted RBP10.04□□□□□ -0.8
NEK4-201ENST00000233027 IGLV4-3A0A075B6K6 122 aa10.04□□□□□ -0.8
NEK4-201ENST00000233027 NDUFC2O95298 119 aa10.04□□□□□ -0.8
NEK4-201ENST00000233027 LMO4P61968 165 aa10.04□□□□□ -0.8
NEK4-201ENST00000233027 PIK3CD-AS1Q5SR53 167 aa10.04□□□□□ -0.8
NEK4-201ENST00000233027 H0Y9J4 135 aa10.03□□□□□ -0.8
NEK4-201ENST00000233027 SCXQ7RTU7 201 aa10.03□□□□□ -0.8
NEK4-201ENST00000233027 TRBV10-1A0A0K0K1A3 114 aa10.03□□□□□ -0.8
NEK4-201ENST00000233027 TM2D2Q9BX73 214 aa10.03□□□□□ -0.8
NEK4-201ENST00000233027 TRIAP1O43715 76 aa10.02□□□□□ -0.8
NEK4-201ENST00000233027 REG3AQ06141 175 aa10.02□□□□□ -0.8
NEK4-201ENST00000233027 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.02□□□□□ -0.82e-7■■■■□ 21.8
NEK4-201ENST00000233027 A8MZ25 164 aa10.02□□□□□ -0.81
NEK4-201ENST00000233027 U3KQK5 164 aa10.02□□□□□ -0.81
NEK4-201ENST00000233027 PCNX3Q9H6A9 2034 aa10.02□□□□□ -0.81
NEK4-201ENST00000233027 MED13LQ71F56 2210 aa10.02□□□□□ -0.81
NEK4-201ENST00000233027 ZFAND3Q9H8U3 227 aa10.02□□□□□ -0.81
NEK4-201ENST00000233027 KIAA1549Q9HCM3 1950 aa10.01□□□□□ -0.81
NEK4-201ENST00000233027 DSCAML1Q8TD84 2053 aa10.01□□□□□ -0.81
NEK4-201ENST00000233027 FBXL19-AS1Q494R0 122 aa10.01□□□□□ -0.81
NEK4-201ENST00000233027 CACNA1HO95180 2353 aa10.01□□□□□ -0.81
NEK4-201ENST00000233027 NCOA6Q14686 2063 aaPredicted RBP10.01□□□□□ -0.81
NEK4-201ENST00000233027 TNFRSF13BO14836 293 aaPredicted RBP10.01□□□□□ -0.81
NEK4-201ENST00000233027 C10orf99Q6UWK7 81 aa10.01□□□□□ -0.81
NEK4-201ENST00000233027 BRK1Q8WUW1 75 aa10.01□□□□□ -0.81
NEK4-201ENST00000233027 PKIGQ9Y2B9 76 aa10.01□□□□□ -0.81
NEK4-201ENST00000233027 PCNX2A6NKB5 2137 aa10.01□□□□□ -0.81
NEK4-201ENST00000233027 LTBP2Q14767 1821 aa10.01□□□□□ -0.81
NEK4-201ENST00000233027 IGKV2-24A0A0C4DH68 120 aa10.01□□□□□ -0.81
NEK4-201ENST00000233027 IGLV2-11P01706 119 aa10.01□□□□□ -0.81
NEK4-201ENST00000233027 K7EQG2 157 aa10□□□□□ -0.81
NEK4-201ENST00000233027 CHCHD10Q8WYQ3 142 aaPredicted RBP10□□□□□ -0.81
NEK4-201ENST00000233027 ODF3Q96PU9 254 aa10□□□□□ -0.81
NEK4-201ENST00000233027 CFAP126Q5VTH2 177 aa10□□□□□ -0.81
NEK4-201ENST00000233027 LINC00308Q8TCZ7 52 aa9.99□□□□□ -0.81
NEK4-201ENST00000233027 M0QY20 66 aa9.99□□□□□ -0.81
NEK4-201ENST00000233027 LY6LH3BQJ8 138 aa9.99□□□□□ -0.81
NEK4-201ENST00000233027 ENHOQ6UWT2 76 aa9.99□□□□□ -0.81
NEK4-201ENST00000233027 PCDH15Q96QU1 1955 aa9.99□□□□□ -0.81
NEK4-201ENST00000233027 FAM222AQ5U5X8 452 aa9.99□□□□□ -0.81
NEK4-201ENST00000233027 MPLKIPQ8TAP9 179 aa9.98□□□□□ -0.81
NEK4-201ENST00000233027 TANC2Q9HCD6 1990 aa9.98□□□□□ -0.81
NEK4-201ENST00000233027 C20orf197Q8N268 126 aa9.98□□□□□ -0.81
NEK4-201ENST00000233027 BPY2O14599 106 aa9.98□□□□□ -0.81
NEK4-201ENST00000233027 DEFB114Q30KQ6 69 aa9.98□□□□□ -0.81
NEK4-201ENST00000233027 C2orf91Q6ZV80 131 aa9.98□□□□□ -0.81
NEK4-201ENST00000233027 DCANP1Q8TF63 244 aa9.97□□□□□ -0.81
NEK4-201ENST00000233027 Q6YL49 198 aa9.97□□□□□ -0.81
NEK4-201ENST00000233027 GAS8-AS1O95177 125 aa9.97□□□□□ -0.81
NEK4-201ENST00000233027 UFSP1Q6NVU6 142 aa9.97□□□□□ -0.81
NEK4-201ENST00000233027 MRPS12O15235 138 aaKnown RBP9.96□□□□□ -0.81
NEK4-201ENST00000233027 A0A096LNI7 61 aa9.96□□□□□ -0.81
NEK4-201ENST00000233027 IGHV4-31P0DP07 118 aa9.96□□□□□ -0.81
NEK4-201ENST00000233027 PRR9Q5T870 116 aa9.96□□□□□ -0.81
NEK4-201ENST00000233027 HIGD2AQ9BW72 106 aa9.96□□□□□ -0.82
NEK4-201ENST00000233027 MED12LQ86YW9 2145 aa9.95□□□□□ -0.82
NEK4-201ENST00000233027 PRM2P04554 102 aa9.95□□□□□ -0.82
NEK4-201ENST00000233027 PDE6GP18545 87 aa9.95□□□□□ -0.82
NEK4-201ENST00000233027 NRACQ8N912 160 aa9.95□□□□□ -0.82
NEK4-201ENST00000233027 TRBV30A0A0K0K1B3 111 aa9.94□□□□□ -0.82
NEK4-201ENST00000233027 RBX1P62877 108 aa9.94□□□□□ -0.82
NEK4-201ENST00000233027 C11orf45Q8TAV5 145 aa9.94□□□□□ -0.82
NEK4-201ENST00000233027 B9D2Q9BPU9 175 aa9.94□□□□□ -0.82
NEK4-201ENST00000233027 C11orf21Q9P2W6 132 aa9.94□□□□□ -0.82
NEK4-201ENST00000233027 LINC00482Q8N8I6 264 aa9.94□□□□□ -0.82
NEK4-201ENST00000233027 XAGE1AQ9HD64 81 aa9.94□□□□□ -0.82
NEK4-201ENST00000233027 IGKV4-1P06312 121 aa9.94□□□□□ -0.82
NEK4-201ENST00000233027 UQCRQO14949 82 aa9.93□□□□□ -0.82
NEK4-201ENST00000233027 Q8N976 141 aa9.93□□□□□ -0.82
NEK4-201ENST00000233027 C3orf22Q8N5N4 141 aa9.93□□□□□ -0.82
NEK4-201ENST00000233027 TSHBP01222 138 aa9.93□□□□□ -0.82
NEK4-201ENST00000233027 SVIPQ8NHG7 77 aa9.93□□□□□ -0.82
NEK4-201ENST00000233027 RNASE3P12724 160 aaKnown RBP9.92□□□□□ -0.82
NEK4-201ENST00000233027 TRBV6-8A0A0A6YYG3 113 aa9.92□□□□□ -0.82
NEK4-201ENST00000233027 INSL3P51460 131 aa9.92□□□□□ -0.82
NEK4-201ENST00000233027 Q6ZS46 218 aa9.92□□□□□ -0.82
NEK4-201ENST00000233027 EBI3Q14213 229 aa9.91□□□□□ -0.82
NEK4-201ENST00000233027 PLCE1Q9P212 2302 aa9.91□□□□□ -0.82
NEK4-201ENST00000233027 FAM236DA0A1B0GTK5 79 aa9.91□□□□□ -0.82
NEK4-201ENST00000233027 H7C423 109 aa9.91□□□□□ -0.82
NEK4-201ENST00000233027 FAM236CP0DP71 79 aa9.91□□□□□ -0.82
NEK4-201ENST00000233027 FAM19A1Q7Z5A9 133 aa9.91□□□□□ -0.82
NEK4-201ENST00000233027 IBA57-AS1B1ANH7 110 aa9.91□□□□□ -0.82
NEK4-201ENST00000233027 CRYGDP07320 174 aa9.91□□□□□ -0.82
NEK4-201ENST00000233027 LOC100131303A0A0U1RQF7 123 aa9.91□□□□□ -0.82
NEK4-201ENST00000233027 C18orf65Q6ZTR6 163 aa9.91□□□□□ -0.82
NEK4-201ENST00000233027 C4orf48Q5BLP8 95 aa9.9□□□□□ -0.82
NEK4-201ENST00000233027 SPTSSBQ8NFR3 76 aa9.9□□□□□ -0.82
NEK4-201ENST00000233027 LINC00526Q96FQ7 95 aa9.9□□□□□ -0.82
NEK4-201ENST00000233027 FAM19A5Q7Z5A7 132 aaPredicted RBP9.9□□□□□ -0.82
NEK4-201ENST00000233027 C6orf99Q4VX62 202 aa9.9□□□□□ -0.82
NEK4-201ENST00000233027 TRBV27A0A0K0K1C4 114 aa9.9□□□□□ -0.83
NEK4-201ENST00000233027 LYRM9A8MSI8 78 aa9.89□□□□□ -0.83
NEK4-201ENST00000233027 C11orf71Q6IPW1 123 aa9.89□□□□□ -0.83
NEK4-201ENST00000233027 COL4A4P53420 1690 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms