RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 UBE2D4Q9Y2X8 147 aa15.93■□□□□ 0.14
SMARCD2-201ENST00000225742 CCL24O00175 119 aa15.92■□□□□ 0.14
SMARCD2-201ENST00000225742 CFC1BP0CG36 223 aa15.92■□□□□ 0.14
SMARCD2-201ENST00000225742 CFC1P0CG37 223 aa15.92■□□□□ 0.14
SMARCD2-201ENST00000225742 TIMM21Q9BVV7 248 aa15.92■□□□□ 0.14
SMARCD2-201ENST00000225742 COTL1Q14019 142 aa15.91■□□□□ 0.14
SMARCD2-201ENST00000225742 C21orf62-AS1Q17RA5 79 aa15.91■□□□□ 0.14
SMARCD2-201ENST00000225742 C10orf126Q8N4M7 172 aa15.91■□□□□ 0.14
SMARCD2-201ENST00000225742 WFDC11Q8NEX6 87 aa15.91■□□□□ 0.14
SMARCD2-201ENST00000225742 IL17DQ8TAD2 202 aa15.91■□□□□ 0.14
SMARCD2-201ENST00000225742 PRO1854Q9UHT4 67 aa15.91■□□□□ 0.14
SMARCD2-201ENST00000225742 POLQO75417 2590 aa15.91■□□□□ 0.14
SMARCD2-201ENST00000225742 MAP1AP78559 2803 aaPredicted RBP15.9■□□□□ 0.14
SMARCD2-201ENST00000225742 NAV2Q8IVL1 2488 aa15.9■□□□□ 0.14
SMARCD2-201ENST00000225742 TRBV20-1A0A075B6N2 111 aa15.89■□□□□ 0.13
SMARCD2-201ENST00000225742 IGHV3-30-3P0DP02 117 aa15.89■□□□□ 0.13
SMARCD2-201ENST00000225742 XCL2Q9UBD3 114 aa15.89■□□□□ 0.13
SMARCD2-201ENST00000225742 PTPN13Q12923 2485 aa15.89■□□□□ 0.13
SMARCD2-201ENST00000225742 IGHV1-58A0A0C4DH39 117 aa15.89■□□□□ 0.13
SMARCD2-201ENST00000225742 C1orf158Q8N1D5 194 aa15.89■□□□□ 0.13
SMARCD2-201ENST00000225742 C16orf95Q9H693 158 aa15.89■□□□□ 0.13
SMARCD2-201ENST00000225742 TSSC4Q9Y5U2 329 aaPredicted RBP15.89■□□□□ 0.13
SMARCD2-201ENST00000225742 CREBBPQ92793 2442 aa15.89■□□□□ 0.13
SMARCD2-201ENST00000225742 LRRK2Q5S007 2527 aa15.89■□□□□ 0.13
SMARCD2-201ENST00000225742 CRYBG3Q68DQ2 2970 aa15.88■□□□□ 0.13
SMARCD2-201ENST00000225742 LOC107984156A0A0G2JMH3 177 aa15.88■□□□□ 0.13
SMARCD2-201ENST00000225742 ARL17AQ8IVW1 177 aa15.88■□□□□ 0.13
SMARCD2-201ENST00000225742 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.87■□□□□ 0.13
SMARCD2-201ENST00000225742 A0A0B4J2C4 111 aa15.87■□□□□ 0.13
SMARCD2-201ENST00000225742 A0A0J9YXY3 114 aa15.87■□□□□ 0.13
SMARCD2-201ENST00000225742 ATP6V0E2Q8NHE4 81 aa15.87■□□□□ 0.13
SMARCD2-201ENST00000225742 ESM1Q9NQ30 184 aa15.87■□□□□ 0.13
SMARCD2-201ENST00000225742 Q9UF83 564 aa15.87■□□□□ 0.13
SMARCD2-201ENST00000225742 IGHV3-64A0A075B6Q5 118 aa15.86■□□□□ 0.13
SMARCD2-201ENST00000225742 AZU1P20160 251 aa15.86■□□□□ 0.13
SMARCD2-201ENST00000225742 CEMP1Q6PRD7 247 aaPredicted RBP15.86■□□□□ 0.13
SMARCD2-201ENST00000225742 ZANQ9Y493 2812 aa15.85■□□□□ 0.13
SMARCD2-201ENST00000225742 A4D1N5 150 aa15.85■□□□□ 0.13
SMARCD2-201ENST00000225742 PSMB2P49721 201 aa15.85■□□□□ 0.13
SMARCD2-201ENST00000225742 ETDBQ3ZM63 59 aa15.85■□□□□ 0.13
SMARCD2-201ENST00000225742 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.84■□□□□ 0.13
SMARCD2-201ENST00000225742 TRBV10-1A0A0K0K1A3 114 aa15.84■□□□□ 0.13
SMARCD2-201ENST00000225742 A0A1W2PRX2 142 aa15.84■□□□□ 0.13
SMARCD2-201ENST00000225742 IGKV2-29A2NJV5 120 aaPredicted RBP15.84■□□□□ 0.13
SMARCD2-201ENST00000225742 TIRAPP58753 221 aa15.84■□□□□ 0.13
SMARCD2-201ENST00000225742 VSIG2Q96IQ7 327 aa15.84■□□□□ 0.13
SMARCD2-201ENST00000225742 RNASE1P07998 156 aaKnown RBP15.84■□□□□ 0.13
SMARCD2-201ENST00000225742 MUSTN1Q8IVN3 82 aa15.84■□□□□ 0.13
SMARCD2-201ENST00000225742 Q6ZUT4 128 aa15.83■□□□□ 0.12
SMARCD2-201ENST00000225742 TMEM263Q8WUH6 116 aaKnown RBP15.83■□□□□ 0.12
SMARCD2-201ENST00000225742 FAM110AQ9BQ89 295 aa15.83■□□□□ 0.12
SMARCD2-201ENST00000225742 MXRA5Q9NR99 2828 aa15.83■□□□□ 0.12
SMARCD2-201ENST00000225742 SH2D6Q7Z4S9 175 aa15.82■□□□□ 0.12
SMARCD2-201ENST00000225742 CITED2Q99967 270 aaPredicted RBP15.82■□□□□ 0.12
SMARCD2-201ENST00000225742 GEMIN7Q9H840 131 aaKnown RBP15.82■□□□□ 0.12
SMARCD2-201ENST00000225742 TRGV1A0A0A0MS02 117 aa15.82■□□□□ 0.12
SMARCD2-201ENST00000225742 HIST2H2BDQ6DRA6 164 aa15.82■□□□□ 0.12
SMARCD2-201ENST00000225742 SPANXDQ9BXN6 97 aa15.82■□□□□ 0.12
SMARCD2-201ENST00000225742 SPANXCQ9NY87 97 aa15.82■□□□□ 0.12
SMARCD2-201ENST00000225742 ZFYVE26Q68DK2 2539 aa15.81■□□□□ 0.12
SMARCD2-201ENST00000225742 IGLV5-45A0A087WSX0 123 aa15.81■□□□□ 0.12
SMARCD2-201ENST00000225742 TRAV4A0A0B4J268 109 aa15.81■□□□□ 0.12
SMARCD2-201ENST00000225742 IGHV3-38A0A0C4DH36 116 aa15.81■□□□□ 0.12
SMARCD2-201ENST00000225742 IGHV3-33P01772 117 aa15.81■□□□□ 0.12
SMARCD2-201ENST00000225742 SMAGPQ0VAQ4 97 aa15.81■□□□□ 0.12
SMARCD2-201ENST00000225742 NDUFA12Q9UI09 145 aa15.81■□□□□ 0.12
SMARCD2-201ENST00000225742 RPL36AP83881 106 aaKnown RBP15.8■□□□□ 0.12
SMARCD2-201ENST00000225742 C11orf44Q8N8P7 122 aa15.8■□□□□ 0.12
SMARCD2-201ENST00000225742 RPL36ALQ969Q0 106 aaKnown RBP15.8■□□□□ 0.12
SMARCD2-201ENST00000225742 LITAFQ99732 161 aa15.8■□□□□ 0.12
SMARCD2-201ENST00000225742 ERG28Q9UKR5 140 aa15.8■□□□□ 0.12
SMARCD2-201ENST00000225742 TIMM17BO60830 172 aa15.8■□□□□ 0.12
SMARCD2-201ENST00000225742 RNASE13Q5GAN3 156 aaKnown RBP15.8■□□□□ 0.12
SMARCD2-201ENST00000225742 DGAT2L7PQ6IED9 249 aa15.8■□□□□ 0.12
SMARCD2-201ENST00000225742 LINC01006Q8NI28 216 aa15.8■□□□□ 0.12
SMARCD2-201ENST00000225742 TEX15Q9BXT5 2789 aa15.79■□□□□ 0.12
SMARCD2-201ENST00000225742 IGHV3OR16-12A0A075B7B8 117 aa15.79■□□□□ 0.12
SMARCD2-201ENST00000225742 TRAV8-3A0A0A6YYJ7 113 aa15.79■□□□□ 0.12
SMARCD2-201ENST00000225742 K7EQD1 137 aa15.79■□□□□ 0.12
SMARCD2-201ENST00000225742 TCL1BO95988 128 aa15.79■□□□□ 0.12
SMARCD2-201ENST00000225742 KRTAP1-1Q07627 177 aa15.79■□□□□ 0.12
SMARCD2-201ENST00000225742 DAZ2Q13117 558 aaKnown RBP15.79■□□□□ 0.12
SMARCD2-201ENST00000225742 DAZ4Q86SG3 579 aaKnown RBP15.79■□□□□ 0.12
SMARCD2-201ENST00000225742 SBSPONQ8IVN8 264 aa15.79■□□□□ 0.12
SMARCD2-201ENST00000225742 RNF183Q96D59 192 aa15.79■□□□□ 0.12
SMARCD2-201ENST00000225742 C1QTNF4Q9BXJ3 329 aa15.79■□□□□ 0.12
SMARCD2-201ENST00000225742 DAZ3Q9NR90 486 aaKnown RBP15.79■□□□□ 0.12
SMARCD2-201ENST00000225742 CSDC2Q9Y534 153 aaKnown RBP15.79■□□□□ 0.12
SMARCD2-201ENST00000225742 SCGB1C2P0DMR2 95 aa15.78■□□□□ 0.12
SMARCD2-201ENST00000225742 SMCPP49901 116 aaPredicted RBP15.78■□□□□ 0.12
SMARCD2-201ENST00000225742 ZFAND6Q6FIF0 208 aa15.78■□□□□ 0.12
SMARCD2-201ENST00000225742 FAM19A3Q7Z5A8 133 aa15.78■□□□□ 0.12
SMARCD2-201ENST00000225742 YAE1D1Q9NRH1 226 aa15.78■□□□□ 0.12
SMARCD2-201ENST00000225742 CIDEAO60543 219 aa15.78■□□□□ 0.12
SMARCD2-201ENST00000225742 MTURNQ8N3F0 131 aa15.77■□□□□ 0.11
SMARCD2-201ENST00000225742 EIF4EBP3O60516 100 aaPredicted RBP15.76■□□□□ 0.11
SMARCD2-201ENST00000225742 SPINK8P0C7L1 97 aa15.76■□□□□ 0.11
SMARCD2-201ENST00000225742 SFTA2Q6UW10 78 aa15.76■□□□□ 0.11
SMARCD2-201ENST00000225742 HERVK_113P63121 156 aa15.75■□□□□ 0.11
SMARCD2-201ENST00000225742 MIAQ16674 131 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms