RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 PKIAP61925 76 aa12.19□□□□□ -0.46
PFN1-201ENST00000225655 COTL1Q14019 142 aa12.19□□□□□ -0.46
PFN1-201ENST00000225655 GNB1LQ9BYB4 327 aa12.19□□□□□ -0.46
PFN1-201ENST00000225655 LRP1BQ9NZR2 4599 aa12.19□□□□□ -0.46
PFN1-201ENST00000225655 ABCA13Q86UQ4 5058 aa12.18□□□□□ -0.46
PFN1-201ENST00000225655 SDHAF1A6NFY7 115 aa12.18□□□□□ -0.46
PFN1-201ENST00000225655 SMKR1H3BMG3 65 aa12.18□□□□□ -0.46
PFN1-201ENST00000225655 EREGO14944 169 aa12.18□□□□□ -0.46
PFN1-201ENST00000225655 APCSP02743 223 aa12.18□□□□□ -0.46
PFN1-201ENST00000225655 ELOBQ15370 118 aa12.18□□□□□ -0.46
PFN1-201ENST00000225655 ATRAIDQ6UW56 229 aa12.18□□□□□ -0.46
PFN1-201ENST00000225655 TMEM136Q6ZRR5 245 aa12.18□□□□□ -0.46
PFN1-201ENST00000225655 WFDC10BQ8IUB3 73 aa12.18□□□□□ -0.46
PFN1-201ENST00000225655 Q8N1X5 172 aa12.18□□□□□ -0.46
PFN1-201ENST00000225655 PGPEP1Q9NXJ5 209 aa12.18□□□□□ -0.46
PFN1-201ENST00000225655 LAMTOR2Q9Y2Q5 125 aa12.18□□□□□ -0.46
PFN1-201ENST00000225655 TRBV24-1A0A075B6N3 115 aa12.17□□□□□ -0.46
PFN1-201ENST00000225655 TRBV25-1A0A075B6N4 114 aa12.17□□□□□ -0.46
PFN1-201ENST00000225655 TRBV6-8A0A0A6YYG3 113 aa12.17□□□□□ -0.46
PFN1-201ENST00000225655 PHOX2AO14813 284 aa12.17□□□□□ -0.46
PFN1-201ENST00000225655 DNAH10OSP0CZ25 163 aa12.17□□□□□ -0.46
PFN1-201ENST00000225655 PMCHP20382 165 aa12.17□□□□□ -0.46
PFN1-201ENST00000225655 C20orf78Q9BR46 151 aa12.17□□□□□ -0.46
PFN1-201ENST00000225655 TGIF2-C20orf24A0A0A6YYL0 155 aa12.16□□□□□ -0.46
PFN1-201ENST00000225655 IGHV1-24A0A0C4DH33 117 aa12.16□□□□□ -0.46
PFN1-201ENST00000225655 I3L3M4 83 aa12.16□□□□□ -0.46
PFN1-201ENST00000225655 RPS10P46783 165 aaKnown RBP12.16□□□□□ -0.46
PFN1-201ENST00000225655 SUMO2P61956 95 aaKnown RBP12.16□□□□□ -0.46
PFN1-201ENST00000225655 CDPF1Q6NVV7 123 aa12.16□□□□□ -0.46
PFN1-201ENST00000225655 PRELID3AQ96N28 172 aa12.16□□□□□ -0.46
PFN1-201ENST00000225655 VCYO14598 125 aa12.15□□□□□ -0.46
PFN1-201ENST00000225655 TNFRSF6BO95407 300 aa12.15□□□□□ -0.46
PFN1-201ENST00000225655 NRACQ8N912 160 aa12.15□□□□□ -0.46
PFN1-201ENST00000225655 KIR2DL4Q99706 377 aa12.15□□□□□ -0.46
PFN1-201ENST00000225655 CHCHD5Q9BSY4 110 aa12.15□□□□□ -0.46
PFN1-201ENST00000225655 TCAPO15273 167 aa12.14□□□□□ -0.47
PFN1-201ENST00000225655 S100A1P23297 94 aa12.14□□□□□ -0.47
PFN1-201ENST00000225655 FCER1GP30273 86 aa12.14□□□□□ -0.47
PFN1-201ENST00000225655 AMTP48728 403 aa12.14□□□□□ -0.47
PFN1-201ENST00000225655 CBLN2Q8IUK8 224 aa12.14□□□□□ -0.47
PFN1-201ENST00000225655 C10orf126Q8N4M7 172 aa12.14□□□□□ -0.47
PFN1-201ENST00000225655 TMEM70Q9BUB7 260 aa12.14□□□□□ -0.47
PFN1-201ENST00000225655 UBE2L6O14933 153 aa12.13□□□□□ -0.47
PFN1-201ENST00000225655 GAS8-AS1O95177 125 aa12.13□□□□□ -0.47
PFN1-201ENST00000225655 IQCJQ1A5X6 159 aa12.13□□□□□ -0.47
PFN1-201ENST00000225655 TMEM243Q9BU79 118 aa12.13□□□□□ -0.47
PFN1-201ENST00000225655 A0A087WTM6 91 aa12.12□□□□□ -0.47
PFN1-201ENST00000225655 A0A087WX48 190 aa12.12□□□□□ -0.47
PFN1-201ENST00000225655 TRBV27A0A0K0K1C4 114 aa12.12□□□□□ -0.47
PFN1-201ENST00000225655 TMEM262E9PQX1 116 aa12.12□□□□□ -0.47
PFN1-201ENST00000225655 RPL32P62910 135 aaKnown RBP12.12□□□□□ -0.47
PFN1-201ENST00000225655 FABP9Q0Z7S8 132 aa12.12□□□□□ -0.47
PFN1-201ENST00000225655 LINC01556Q5JQF7 62 aa12.12□□□□□ -0.47
PFN1-201ENST00000225655 CHCHD7Q9BUK0 85 aa12.12□□□□□ -0.47
PFN1-201ENST00000225655 MRPL18Q9H0U6 180 aaKnown RBP12.12□□□□□ -0.47
PFN1-201ENST00000225655 MAP1LC3AQ9H492 121 aa12.12□□□□□ -0.47
PFN1-201ENST00000225655 TRAPPC1Q9Y5R8 145 aa12.12□□□□□ -0.47
PFN1-201ENST00000225655 NPYP01303 97 aa12.11□□□□□ -0.47
PFN1-201ENST00000225655 POLR2KP53803 58 aaKnown RBP12.11□□□□□ -0.47
PFN1-201ENST00000225655 APOBP04114 4563 aaKnown RBP12.1□□□□□ -0.47
PFN1-201ENST00000225655 SMIM2Q9BVW6 85 aa12.1□□□□□ -0.47
PFN1-201ENST00000225655 RAB5AP20339 215 aa12.09□□□□□ -0.47
PFN1-201ENST00000225655 FUSP35637 526 aaKnown RBP eCLIP12.09□□□□□ -0.47
PFN1-201ENST00000225655 NTM-AS1Q6ZSK4 140 aa12.09□□□□□ -0.47
PFN1-201ENST00000225655 NIT1Q86X76 327 aa12.09□□□□□ -0.47
PFN1-201ENST00000225655 H7C423 109 aa12.08□□□□□ -0.48
PFN1-201ENST00000225655 IGHV3-30P01768 117 aa12.08□□□□□ -0.48
PFN1-201ENST00000225655 IGHV3-33P01772 117 aa12.08□□□□□ -0.48
PFN1-201ENST00000225655 IGHV3-30-3P0DP02 117 aa12.08□□□□□ -0.48
PFN1-201ENST00000225655 IGHV3-30-5P0DP03 117 aa12.08□□□□□ -0.48
PFN1-201ENST00000225655 SMAGPQ0VAQ4 97 aa12.08□□□□□ -0.48
PFN1-201ENST00000225655 KIAA1644Q3SXP7 199 aa12.08□□□□□ -0.48
PFN1-201ENST00000225655 YPEL4Q96NS1 127 aa12.08□□□□□ -0.48
PFN1-201ENST00000225655 ATP6V1G1O75348 118 aa12.07□□□□□ -0.48
PFN1-201ENST00000225655 TSHBP01222 138 aa12.07□□□□□ -0.48
PFN1-201ENST00000225655 TMEM18Q96B42 140 aa12.07□□□□□ -0.48
PFN1-201ENST00000225655 DNAH5Q8TE73 4624 aa12.07□□□□□ -0.48
PFN1-201ENST00000225655 GAGE6Q13070 117 aa12.06□□□□□ -0.48
PFN1-201ENST00000225655 AMMECR1LQ6DCA0 310 aa12.06□□□□□ -0.48
PFN1-201ENST00000225655 DEFB104AQ8WTQ1 72 aa12.06□□□□□ -0.48
PFN1-201ENST00000225655 NXT2Q9NPJ8 142 aaKnown RBP12.06□□□□□ -0.48
PFN1-201ENST00000225655 LOC389332A0A1B0GUA5 103 aa12.05□□□□□ -0.48
PFN1-201ENST00000225655 PRSS47A8MTI9 375 aa12.05□□□□□ -0.48
PFN1-201ENST00000225655 IBA57-AS1B1ANH7 110 aa12.05□□□□□ -0.48
PFN1-201ENST00000225655 K7EMI3 77 aa12.04□□□□□ -0.48
PFN1-201ENST00000225655 XGP55808 180 aa12.04□□□□□ -0.48
PFN1-201ENST00000225655 KRTAP10-1P60331 282 aa12.04□□□□□ -0.48
PFN1-201ENST00000225655 LAGE3Q14657 143 aa12.04□□□□□ -0.48
PFN1-201ENST00000225655 Q8N8P6 123 aa12.04□□□□□ -0.48
PFN1-201ENST00000225655 TMEM101Q96IK0 257 aa12.04□□□□□ -0.48
PFN1-201ENST00000225655 ALKBH7Q9BT30 221 aaPredicted RBP12.04□□□□□ -0.48
PFN1-201ENST00000225655 PSCAO43653 123 aa12.03□□□□□ -0.48
PFN1-201ENST00000225655 PRSS3P2Q8NHM4 247 aa12.03□□□□□ -0.48
PFN1-201ENST00000225655 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.02□□□□□ -0.49
PFN1-201ENST00000225655 IGKV2-29A2NJV5 120 aaPredicted RBP12.02□□□□□ -0.49
PFN1-201ENST00000225655 LRCOL1A6NCL2 159 aa12.02□□□□□ -0.49
PFN1-201ENST00000225655 EPM2AB3EWF7 344 aa12.02□□□□□ -0.49
PFN1-201ENST00000225655 CRPP02741 224 aa12.02□□□□□ -0.49
PFN1-201ENST00000225655 ANGP03950 147 aaKnown RBP12.02□□□□□ -0.49
PFN1-201ENST00000225655 ZNF25P17030 456 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms