RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 IGKV2D-26A0A0A0MRZ7 120 aa12.86□□□□□ -0.35
CBX1-201ENST00000225603 TRAV12-1A0A0B4J245 112 aa12.86□□□□□ -0.35
CBX1-201ENST00000225603 F5H697 171 aa12.86□□□□□ -0.35
CBX1-201ENST00000225603 TMEM97Q5BJF2 176 aa12.86□□□□□ -0.35
CBX1-201ENST00000225603 C2orf66Q6UXQ4 117 aa12.86□□□□□ -0.35
CBX1-201ENST00000225603 GAGE12BA1L429 117 aa12.85□□□□□ -0.35
CBX1-201ENST00000225603 A8MWV9 139 aa12.85□□□□□ -0.35
CBX1-201ENST00000225603 RS1O15537 224 aa12.85□□□□□ -0.35
CBX1-201ENST00000225603 GAGE7O76087 117 aa12.85□□□□□ -0.35
CBX1-201ENST00000225603 GAGE12FP0CL80 117 aa12.85□□□□□ -0.35
CBX1-201ENST00000225603 GAGE12GP0CL81 117 aa12.85□□□□□ -0.35
CBX1-201ENST00000225603 GAGE12IP0CL82 117 aa12.85□□□□□ -0.35
CBX1-201ENST00000225603 ZC2HC1BQ5TFG8 222 aa12.85□□□□□ -0.35
CBX1-201ENST00000225603 NEGR1Q7Z3B1 354 aa12.85□□□□□ -0.35
CBX1-201ENST00000225603 TAX1BP3O14907 124 aa12.84□□□□□ -0.35
CBX1-201ENST00000225603 PLNP26678 52 aa12.84□□□□□ -0.35
CBX1-201ENST00000225603 POLR2KP53803 58 aaKnown RBP12.84□□□□□ -0.35
CBX1-201ENST00000225603 Q6ZSN1 163 aa12.84□□□□□ -0.35
CBX1-201ENST00000225603 H7C1H1 209 aa12.83□□□□□ -0.36
CBX1-201ENST00000225603 IGHV3-53P01767 116 aa12.83□□□□□ -0.36
CBX1-201ENST00000225603 MIFP14174 115 aa12.83□□□□□ -0.36
CBX1-201ENST00000225603 ZNF56Q15929 161 aa12.83□□□□□ -0.36
CBX1-201ENST00000225603 NEXN-AS1Q8NBZ9 246 aa12.83□□□□□ -0.36
CBX1-201ENST00000225603 MRAPQ8TCY5 172 aa12.83□□□□□ -0.36
CBX1-201ENST00000225603 ZNF479Q96JC4 524 aa12.83□□□□□ -0.36
CBX1-201ENST00000225603 TP53TG1Q9Y2A0 90 aa12.83□□□□□ -0.36
CBX1-201ENST00000225603 TRBV6-5A0A0K0K1A5 114 aa12.82□□□□□ -0.36
CBX1-201ENST00000225603 F8VRH5 84 aa12.82□□□□□ -0.36
CBX1-201ENST00000225603 VCYO14598 125 aa12.82□□□□□ -0.36
CBX1-201ENST00000225603 HSD52Q0P140 79 aa12.82□□□□□ -0.36
CBX1-201ENST00000225603 SEC11AP67812 179 aa12.82□□□□□ -0.36
CBX1-201ENST00000225603 ERASQ7Z444 233 aa12.82□□□□□ -0.36
CBX1-201ENST00000225603 OR4C5Q8NGB2 326 aa12.82□□□□□ -0.36
CBX1-201ENST00000225603 CHTOPQ9Y3Y2 248 aaKnown RBP12.82□□□□□ -0.36
CBX1-201ENST00000225603 DEFB130BP0DP73 79 aa12.81□□□□□ -0.36
CBX1-201ENST00000225603 DEFB130AP0DP74 79 aa12.81□□□□□ -0.36
CBX1-201ENST00000225603 FAM222AQ5U5X8 452 aa12.81□□□□□ -0.36
CBX1-201ENST00000225603 BAALCQ8WXS3 180 aa12.81□□□□□ -0.36
CBX1-201ENST00000225603 SDHAF1A6NFY7 115 aa12.81□□□□□ -0.36
CBX1-201ENST00000225603 M0QY20 66 aa12.81□□□□□ -0.36
CBX1-201ENST00000225603 ZFP2Q6ZN57 461 aa12.81□□□□□ -0.36
CBX1-201ENST00000225603 LINC00612Q8N6U2 182 aa12.81□□□□□ -0.36
CBX1-201ENST00000225603 KIR2DL4Q99706 377 aa12.81□□□□□ -0.36
CBX1-201ENST00000225603 TTTY13Q9BZ97 58 aa12.81□□□□□ -0.36
CBX1-201ENST00000225603 CYSLTR1Q9Y271 337 aa12.81□□□□□ -0.36
CBX1-201ENST00000225603 TENM3Q9P273 2699 aa12.8□□□□□ -0.36
CBX1-201ENST00000225603 TRGV2A0A075B6R0 118 aa12.8□□□□□ -0.36
CBX1-201ENST00000225603 Q9UF83 564 aa12.8□□□□□ -0.36
CBX1-201ENST00000225603 CELA1Q9UNI1 258 aa12.8□□□□□ -0.36
CBX1-201ENST00000225603 TRAV4A0A0B4J268 109 aa12.8□□□□□ -0.36
CBX1-201ENST00000225603 TRBV27A0A0K0K1C4 114 aa12.8□□□□□ -0.36
CBX1-201ENST00000225603 P0DMU3 169 aa12.79□□□□□ -0.36
CBX1-201ENST00000225603 FAM231AP0DMU4 169 aa12.79□□□□□ -0.36
CBX1-201ENST00000225603 FAM231CP0DMU5 169 aa12.79□□□□□ -0.36
CBX1-201ENST00000225603 LINC01549A6NIU2 74 aa12.78□□□□□ -0.36
CBX1-201ENST00000225603 HIGD1BQ9P298 99 aa12.78□□□□□ -0.36
CBX1-201ENST00000225603 RHODO00212 210 aa12.78□□□□□ -0.36
CBX1-201ENST00000225603 PRSS29PA6NIE9 313 aa12.77□□□□□ -0.36
CBX1-201ENST00000225603 LYRM9A8MSI8 78 aa12.77□□□□□ -0.36
CBX1-201ENST00000225603 UBE2V1Q13404 147 aa12.77□□□□□ -0.36
CBX1-201ENST00000225603 DEFB104AQ8WTQ1 72 aa12.77□□□□□ -0.36
CBX1-201ENST00000225603 CCL25O15444 150 aa12.77□□□□□ -0.37
CBX1-201ENST00000225603 IGIPA6NJ69 53 aa12.76□□□□□ -0.37
CBX1-201ENST00000225603 PTTG1IPP53801 180 aa12.76□□□□□ -0.37
CBX1-201ENST00000225603 TM2D3Q9BRN9 247 aa12.76□□□□□ -0.37
CBX1-201ENST00000225603 A6NDN8 102 aa12.76□□□□□ -0.37
CBX1-201ENST00000225603 TSHBP01222 138 aa12.76□□□□□ -0.37
CBX1-201ENST00000225603 VAMP3Q15836 100 aa12.76□□□□□ -0.37
CBX1-201ENST00000225603 TRBV25-1A0A075B6N4 114 aa12.75□□□□□ -0.37
CBX1-201ENST00000225603 RPL39P62891 51 aaKnown RBP12.75□□□□□ -0.37
CBX1-201ENST00000225603 CHAC1Q9BUX1 264 aa12.75□□□□□ -0.37
CBX1-201ENST00000225603 TRAV8-6A0A0B4J262 113 aa12.74□□□□□ -0.37
CBX1-201ENST00000225603 MAPKAPK5-AS1Q8N8E1 139 aa12.74□□□□□ -0.37
CBX1-201ENST00000225603 TMEM141Q96I45 108 aa12.74□□□□□ -0.37
CBX1-201ENST00000225603 TIMM17AQ99595 171 aa12.74□□□□□ -0.37
CBX1-201ENST00000225603 SPATA25Q9BR10 227 aa12.74□□□□□ -0.37
CBX1-201ENST00000225603 EDA2RQ9HAV5 297 aa12.74□□□□□ -0.37
CBX1-201ENST00000225603 FHL2Q14192 279 aa12.73□□□□□ -0.37
CBX1-201ENST00000225603 RHOHQ15669 191 aa12.73□□□□□ -0.37
CBX1-201ENST00000225603 SPART-AS1P0CW21 52 aa12.73□□□□□ -0.37
CBX1-201ENST00000225603 SLC25A29Q8N8R3 303 aa12.72□□□□□ -0.37
CBX1-201ENST00000225603 HUWE1Q7Z6Z7 4374 aaKnown RBP12.72□□□□□ -0.37
CBX1-201ENST00000225603 A0A0J9YWU9 116 aa12.72□□□□□ -0.37
CBX1-201ENST00000225603 H3BRM9 83 aa12.72□□□□□ -0.37
CBX1-201ENST00000225603 DAD1P61803 113 aa12.72□□□□□ -0.37
CBX1-201ENST00000225603 TRGV4A0A0C4DH28 118 aa12.71□□□□□ -0.37
CBX1-201ENST00000225603 PMVKQ15126 192 aa12.71□□□□□ -0.37
CBX1-201ENST00000225603 I3L3M4 83 aa12.7□□□□□ -0.38
CBX1-201ENST00000225603 CST9LQ9H4G1 147 aa12.7□□□□□ -0.38
CBX1-201ENST00000225603 IGLV4-69A0A075B6H9 119 aa12.7□□□□□ -0.38
CBX1-201ENST00000225603 E9PLD3 99 aa12.7□□□□□ -0.38
CBX1-201ENST00000225603 GCSHP23434 173 aa12.7□□□□□ -0.38
CBX1-201ENST00000225603 C11orf68Q9H3H3 251 aaKnown RBP12.7□□□□□ -0.38
CBX1-201ENST00000225603 K7EQD1 137 aa12.69□□□□□ -0.38
CBX1-201ENST00000225603 C12orf74Q32Q52 190 aa12.69□□□□□ -0.38
CBX1-201ENST00000225603 AMMECR1LQ6DCA0 310 aa12.69□□□□□ -0.38
CBX1-201ENST00000225603 LOC100131303A0A0U1RQF7 123 aa12.69□□□□□ -0.38
CBX1-201ENST00000225603 MYMXA0A1B0GTQ4 84 aa12.68□□□□□ -0.38
CBX1-201ENST00000225603 C11orf86A6NJI1 115 aa12.68□□□□□ -0.38
CBX1-201ENST00000225603 CIDEAO60543 219 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms