RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ANKRD29Q8N6D5 301 aa8.73□□□□□ -1.01
NOD1-201ENST00000222823 PRRC2CQ9Y520 2896 aaKnown RBP8.73□□□□□ -1.01
NOD1-201ENST00000222823 DNAJC9-AS1A6NH13 148 aa8.72□□□□□ -1.01
NOD1-201ENST00000222823 CRYBA4P53673 196 aa8.72□□□□□ -1.01
NOD1-201ENST00000222823 VSIG2Q96IQ7 327 aa8.72□□□□□ -1.01
NOD1-201ENST00000222823 ORMDL1Q9P0S3 153 aa8.72□□□□□ -1.01
NOD1-201ENST00000222823 DAND5Q8N907 189 aa8.72□□□□□ -1.01
NOD1-201ENST00000222823 COX7B2Q8TF08 81 aa8.72□□□□□ -1.01
NOD1-201ENST00000222823 H0YGX0 51 aa8.72□□□□□ -1.01
NOD1-201ENST00000222823 C15orf53Q8NAA6 179 aa8.72□□□□□ -1.01
NOD1-201ENST00000222823 TMEM263Q8WUH6 116 aaKnown RBP8.72□□□□□ -1.01
NOD1-201ENST00000222823 MAP6D1Q9H9H5 199 aa8.72□□□□□ -1.01
NOD1-201ENST00000222823 TRBV10-1A0A0K0K1A3 114 aa8.71□□□□□ -1.01
NOD1-201ENST00000222823 GDF5OSQ5U4N7 250 aa8.71□□□□□ -1.01
NOD1-201ENST00000222823 INSL3P51460 131 aa8.71□□□□□ -1.02
NOD1-201ENST00000222823 MTORP42345 2549 aa8.71□□□□□ -1.02
NOD1-201ENST00000222823 PRO0255Q9UI72 69 aa8.71□□□□□ -1.02
NOD1-201ENST00000222823 K7EQG2 157 aa8.7□□□□□ -1.02
NOD1-201ENST00000222823 IGLC6P0CF74 106 aa8.7□□□□□ -1.02
NOD1-201ENST00000222823 SPATA12Q7Z6I5 190 aa8.7□□□□□ -1.02
NOD1-201ENST00000222823 LY6LH3BQJ8 138 aa8.7□□□□□ -1.02
NOD1-201ENST00000222823 OPRPNQ99935 248 aaPredicted RBP8.7□□□□□ -1.02
NOD1-201ENST00000222823 SPANXDQ9BXN6 97 aa8.7□□□□□ -1.02
NOD1-201ENST00000222823 RS1O15537 224 aa8.7□□□□□ -1.02
NOD1-201ENST00000222823 ETDCA0A1B0GVM5 59 aa8.69□□□□□ -1.02
NOD1-201ENST00000222823 DEFB105AQ8NG35 78 aa8.69□□□□□ -1.02
NOD1-201ENST00000222823 KLK12Q9UKR0 248 aa8.69□□□□□ -1.02
NOD1-201ENST00000222823 SMAD5-AS1Q9Y6J3 95 aa8.69□□□□□ -1.02
NOD1-201ENST00000222823 IGHV4-4A0A075B6R2 117 aa8.69□□□□□ -1.02
NOD1-201ENST00000222823 LRRC75A-AS1Q8N1F1 130 aa8.69□□□□□ -1.02
NOD1-201ENST00000222823 LINC01620Q4KN68 170 aa8.69□□□□□ -1.02
NOD1-201ENST00000222823 WFDC11Q8NEX6 87 aa8.69□□□□□ -1.02
NOD1-201ENST00000222823 Q6YL49 198 aa8.68□□□□□ -1.02
NOD1-201ENST00000222823 XIRP2A4UGR9 3374 aa8.68□□□□□ -1.02
NOD1-201ENST00000222823 PCSK5Q92824 1860 aa8.68□□□□□ -1.02
NOD1-201ENST00000222823 RPL18AQ02543 176 aaKnown RBP8.68□□□□□ -1.02
NOD1-201ENST00000222823 IGHV1-58A0A0C4DH39 117 aa8.68□□□□□ -1.02
NOD1-201ENST00000222823 TAX1BP3O14907 124 aa8.68□□□□□ -1.02
NOD1-201ENST00000222823 IGHV4-31P0DP07 118 aa8.68□□□□□ -1.02
NOD1-201ENST00000222823 WFDC2Q14508 124 aa8.68□□□□□ -1.02
NOD1-201ENST00000222823 C11orf71Q6IPW1 123 aa8.68□□□□□ -1.02
NOD1-201ENST00000222823 CEMP1Q6PRD7 247 aaPredicted RBP8.68□□□□□ -1.02
NOD1-201ENST00000222823 PRUNE2Q8WUY3 3088 aa8.68□□□□□ -1.02
NOD1-201ENST00000222823 hADV29S1A0JD25 119 aa8.68□□□□□ -1.02
NOD1-201ENST00000222823 NDUFA1O15239 70 aa8.67□□□□□ -1.02
NOD1-201ENST00000222823 ZFAND3Q9H8U3 227 aa8.67□□□□□ -1.02
NOD1-201ENST00000222823 Q6ZTI0 123 aa8.67□□□□□ -1.02
NOD1-201ENST00000222823 TEN1Q86WV5 123 aa8.67□□□□□ -1.02
NOD1-201ENST00000222823 LGALS9O00182 355 aa8.67□□□□□ -1.02
NOD1-201ENST00000222823 SPAG11BQ08648 103 aa8.67□□□□□ -1.02
NOD1-201ENST00000222823 ODF3Q96PU9 254 aa8.67□□□□□ -1.02
NOD1-201ENST00000222823 DEFB114Q30KQ6 69 aa8.66□□□□□ -1.02
NOD1-201ENST00000222823 LINC00310P59036 64 aa8.66□□□□□ -1.02
NOD1-201ENST00000222823 MIR7-3HGQ8N6C7 128 aa8.66□□□□□ -1.02
NOD1-201ENST00000222823 P0DMU3 169 aa8.66□□□□□ -1.02
NOD1-201ENST00000222823 FAM231AP0DMU4 169 aa8.66□□□□□ -1.02
NOD1-201ENST00000222823 FAM231CP0DMU5 169 aa8.66□□□□□ -1.02
NOD1-201ENST00000222823 ACYP1P07311 99 aa8.66□□□□□ -1.02
NOD1-201ENST00000222823 Q6ZUT4 128 aa8.66□□□□□ -1.02
NOD1-201ENST00000222823 CXCL5P42830 114 aa8.65□□□□□ -1.02
NOD1-201ENST00000222823 DNAH14Q0VDD8 3507 aa8.65□□□□□ -1.03
NOD1-201ENST00000222823 F8W735 103 aaPredicted RBP8.64□□□□□ -1.03
NOD1-201ENST00000222823 CRIP1P50238 77 aa8.64□□□□□ -1.03
NOD1-201ENST00000222823 ZFAND2AQ8N6M9 145 aa8.64□□□□□ -1.03
NOD1-201ENST00000222823 TET2Q6N021 2002 aaPredicted RBP8.64□□□□□ -1.03
NOD1-201ENST00000222823 FUSP35637 526 aaKnown RBP eCLIP8.64□□□□□ -1.03
NOD1-201ENST00000222823 C20orf173Q96LM9 149 aa8.64□□□□□ -1.03
NOD1-201ENST00000222823 CITED1Q99966 193 aa8.64□□□□□ -1.03
NOD1-201ENST00000222823 LECT2O14960 151 aa8.63□□□□□ -1.03
NOD1-201ENST00000222823 C10orf99Q6UWK7 81 aa8.63□□□□□ -1.03
NOD1-201ENST00000222823 Q6ZSV7 163 aa8.63□□□□□ -1.03
NOD1-201ENST00000222823 IGLV2-11P01706 119 aa8.63□□□□□ -1.03
NOD1-201ENST00000222823 TRACP01848 142 aa8.63□□□□□ -1.03
NOD1-201ENST00000222823 TIRAPP58753 221 aa8.62□□□□□ -1.03
NOD1-201ENST00000222823 PKIGQ9Y2B9 76 aa8.62□□□□□ -1.03
NOD1-201ENST00000222823 FAM222AQ5U5X8 452 aa8.61□□□□□ -1.03
NOD1-201ENST00000222823 NDUFA11Q86Y39 141 aa8.61□□□□□ -1.03
NOD1-201ENST00000222823 Q8N6K4 173 aa8.61□□□□□ -1.03
NOD1-201ENST00000222823 TRAV26-1A0A087WT03 109 aa8.6□□□□□ -1.03
NOD1-201ENST00000222823 RNASE8Q8TDE3 154 aaKnown RBP8.6□□□□□ -1.03
NOD1-201ENST00000222823 TM2D2Q9BX73 214 aa8.6□□□□□ -1.03
NOD1-201ENST00000222823 H3BT86 120 aa8.6□□□□□ -1.03
NOD1-201ENST00000222823 CLEC2BQ92478 149 aa8.6□□□□□ -1.03
NOD1-201ENST00000222823 CDKN2A-AS1Q9UH64 79 aa8.6□□□□□ -1.03
NOD1-201ENST00000222823 POLQO75417 2590 aa8.6□□□□□ -1.03
NOD1-201ENST00000222823 TRBV10-2A0A0K0K1G8 114 aa8.6□□□□□ -1.03
NOD1-201ENST00000222823 NCR3O14931 201 aa8.6□□□□□ -1.03
NOD1-201ENST00000222823 TRIOO75962 3097 aa8.59□□□□□ -1.03
NOD1-201ENST00000222823 A0A0J9YXY3 114 aa8.59□□□□□ -1.03
NOD1-201ENST00000222823 SMIM9A6NGZ8 99 aa8.59□□□□□ -1.03
NOD1-201ENST00000222823 JMJD7-PLA2G4BH0Y9G9 81 aa8.59□□□□□ -1.03
NOD1-201ENST00000222823 FOXI1Q12951 378 aa8.59□□□□□ -1.03
NOD1-201ENST00000222823 NEXN-AS1Q8NBZ9 246 aa8.59□□□□□ -1.03
NOD1-201ENST00000222823 PSMB8P28062 276 aa8.58□□□□□ -1.04
NOD1-201ENST00000222823 ZNF843Q8N446 348 aa8.58□□□□□ -1.04
NOD1-201ENST00000222823 LINC00467Q9BRT7 94 aa8.58□□□□□ -1.04
NOD1-201ENST00000222823 RAI1Q7Z5J4 1906 aaPredicted RBP8.58□□□□□ -1.04
NOD1-201ENST00000222823 IGHV4-28A0A0C4DH34 117 aa8.58□□□□□ -1.04
NOD1-201ENST00000222823 INAFM1C9JVW0 142 aa8.58□□□□□ -1.04
NOD1-201ENST00000222823 MIAQ16674 131 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms