RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 TIRAPP58753 221 aa11.26□□□□□ -0.61
LIM2-201ENST00000221973 LAMTOR2Q9Y2Q5 125 aa11.26□□□□□ -0.61
LIM2-201ENST00000221973 LOC389332A0A1B0GUA5 103 aa11.25□□□□□ -0.61
LIM2-201ENST00000221973 A0A1B0GVY2 172 aa11.25□□□□□ -0.61
LIM2-201ENST00000221973 COTL1Q14019 142 aa11.25□□□□□ -0.61
LIM2-201ENST00000221973 LELP1Q5T871 98 aa11.25□□□□□ -0.61
LIM2-201ENST00000221973 ALKBH7Q9BT30 221 aaPredicted RBP11.25□□□□□ -0.61
LIM2-201ENST00000221973 MAP1LC3AQ9H492 121 aa11.25□□□□□ -0.61
LIM2-201ENST00000221973 MRPS16Q9Y3D3 137 aaKnown RBP11.25□□□□□ -0.61
LIM2-201ENST00000221973 TRBV6-8A0A0A6YYG3 113 aa11.24□□□□□ -0.61
LIM2-201ENST00000221973 I3L3M4 83 aa11.24□□□□□ -0.61
LIM2-201ENST00000221973 VCYO14598 125 aa11.24□□□□□ -0.61
LIM2-201ENST00000221973 TRGC2P03986 189 aa11.24□□□□□ -0.61
LIM2-201ENST00000221973 NTM-AS1Q6ZSK4 140 aa11.24□□□□□ -0.61
LIM2-201ENST00000221973 TRBV27A0A0K0K1C4 114 aa11.23□□□□□ -0.61
LIM2-201ENST00000221973 TMEM97Q5BJF2 176 aa11.23□□□□□ -0.61
LIM2-201ENST00000221973 SMIM2Q9BVW6 85 aa11.23□□□□□ -0.61
LIM2-201ENST00000221973 TRAV8-6A0A0B4J262 113 aa11.22□□□□□ -0.61
LIM2-201ENST00000221973 TSHBP01222 138 aa11.22□□□□□ -0.61
LIM2-201ENST00000221973 RPL32P62910 135 aaKnown RBP11.22□□□□□ -0.61
LIM2-201ENST00000221973 TRBV25-1A0A075B6N4 114 aa11.21□□□□□ -0.61
LIM2-201ENST00000221973 IGHV1-24A0A0C4DH33 117 aa11.21□□□□□ -0.61
LIM2-201ENST00000221973 RTL8CO15255 209 aa11.21□□□□□ -0.61
LIM2-201ENST00000221973 FCER1GP30273 86 aa11.21□□□□□ -0.61
LIM2-201ENST00000221973 AMTP48728 403 aa11.21□□□□□ -0.61
LIM2-201ENST00000221973 WFDC10BQ8IUB3 73 aa11.21□□□□□ -0.61
LIM2-201ENST00000221973 KIR2DL4Q99706 377 aa11.21□□□□□ -0.61
LIM2-201ENST00000221973 UPK3BQ9BT76 320 aa11.21□□□□□ -0.61
LIM2-201ENST00000221973 PRSS47A8MTI9 375 aa11.2□□□□□ -0.62
LIM2-201ENST00000221973 TCAPO15273 167 aa11.2□□□□□ -0.62
LIM2-201ENST00000221973 LINC00336Q6ZUF6 198 aa11.2□□□□□ -0.62
LIM2-201ENST00000221973 IGLV2-18A0A075B6J9 118 aa11.19□□□□□ -0.62
LIM2-201ENST00000221973 IFI27P40305 119 aaPredicted RBP11.19□□□□□ -0.62
LIM2-201ENST00000221973 IQCJQ1A5X6 159 aa11.19□□□□□ -0.62
LIM2-201ENST00000221973 CHCHD5Q9BSY4 110 aa11.19□□□□□ -0.62
LIM2-201ENST00000221973 TMEM243Q9BU79 118 aa11.19□□□□□ -0.62
LIM2-201ENST00000221973 SIVA1O15304 175 aa11.18□□□□□ -0.62
LIM2-201ENST00000221973 Q8N8P6 123 aa11.18□□□□□ -0.62
LIM2-201ENST00000221973 PRSS3P2Q8NHM4 247 aa11.18□□□□□ -0.62
LIM2-201ENST00000221973 Q9H8V8 135 aa11.18□□□□□ -0.62
LIM2-201ENST00000221973 NXT2Q9NPJ8 142 aaKnown RBP11.18□□□□□ -0.62
LIM2-201ENST00000221973 ABCA13Q86UQ4 5058 aa11.17□□□□□ -0.62
LIM2-201ENST00000221973 TMEM262E9PQX1 116 aa11.17□□□□□ -0.62
LIM2-201ENST00000221973 M0R2N4 97 aa11.17□□□□□ -0.62
LIM2-201ENST00000221973 GAGE6Q13070 117 aa11.17□□□□□ -0.62
LIM2-201ENST00000221973 C18orf32Q8TCD1 76 aa11.17□□□□□ -0.62
LIM2-201ENST00000221973 CHCHD7Q9BUK0 85 aa11.17□□□□□ -0.62
LIM2-201ENST00000221973 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.16□□□□□ -0.62
LIM2-201ENST00000221973 IGKV2-29A2NJV5 120 aaPredicted RBP11.16□□□□□ -0.62
LIM2-201ENST00000221973 UBE2L6O14933 153 aa11.16□□□□□ -0.62
LIM2-201ENST00000221973 Q6ZR54 194 aa11.16□□□□□ -0.62
LIM2-201ENST00000221973 IGHV3-30P01768 117 aa11.15□□□□□ -0.62
LIM2-201ENST00000221973 IGHV3-33P01772 117 aa11.15□□□□□ -0.62
LIM2-201ENST00000221973 IGHV3-30-3P0DP02 117 aa11.15□□□□□ -0.62
LIM2-201ENST00000221973 IGHV3-30-5P0DP03 117 aa11.15□□□□□ -0.62
LIM2-201ENST00000221973 ESDP10768 282 aa11.15□□□□□ -0.62
LIM2-201ENST00000221973 NIT1Q86X76 327 aa11.15□□□□□ -0.62
LIM2-201ENST00000221973 Q8N3U1 123 aa11.15□□□□□ -0.62
LIM2-201ENST00000221973 PRSS29PA6NIE9 313 aa11.14□□□□□ -0.63
LIM2-201ENST00000221973 DNAH10OSP0CZ25 163 aa11.14□□□□□ -0.63
LIM2-201ENST00000221973 FA2HQ7L5A8 372 aa11.14□□□□□ -0.63
LIM2-201ENST00000221973 A0A087WX48 190 aa11.13□□□□□ -0.63
LIM2-201ENST00000221973 LAGE3Q14657 143 aa11.12□□□□□ -0.63
LIM2-201ENST00000221973 MPV17L2Q567V2 206 aa11.12□□□□□ -0.63
LIM2-201ENST00000221973 LINC01556Q5JQF7 62 aa11.12□□□□□ -0.63
LIM2-201ENST00000221973 K7EMI3 77 aa11.11□□□□□ -0.63
LIM2-201ENST00000221973 PKIAP61925 76 aa11.11□□□□□ -0.63
LIM2-201ENST00000221973 ORMDL2Q53FV1 153 aa11.11□□□□□ -0.63
LIM2-201ENST00000221973 AMMECR1LQ6DCA0 310 aa11.11□□□□□ -0.63
LIM2-201ENST00000221973 RNASEKQ6P5S7 137 aaKnown RBP11.11□□□□□ -0.63
LIM2-201ENST00000221973 BAGE3Q86Y29 109 aa11.11□□□□□ -0.63
LIM2-201ENST00000221973 Q8N976 141 aa11.11□□□□□ -0.63
LIM2-201ENST00000221973 C20orf203Q8NBC4 194 aa11.11□□□□□ -0.63
LIM2-201ENST00000221973 URB1-AS1Q96HZ7 61 aa11.11□□□□□ -0.63
LIM2-201ENST00000221973 NBDYA0A0U1RRE5 68 aa11.1□□□□□ -0.63
LIM2-201ENST00000221973 H7C423 109 aa11.1□□□□□ -0.63
LIM2-201ENST00000221973 LINC00614P0C842 121 aa11.1□□□□□ -0.63
LIM2-201ENST00000221973 FGF6P10767 208 aa11.1□□□□□ -0.63
LIM2-201ENST00000221973 RAB5BP61020 215 aa11.1□□□□□ -0.63
LIM2-201ENST00000221973 RBX1P62877 108 aa11.1□□□□□ -0.63
LIM2-201ENST00000221973 RPL39P62891 51 aaKnown RBP11.1□□□□□ -0.63
LIM2-201ENST00000221973 Q0VG73 95 aa11.1□□□□□ -0.63
LIM2-201ENST00000221973 TMEM18Q96B42 140 aa11.1□□□□□ -0.63
LIM2-201ENST00000221973 TRAV9-2A0A087WT02 112 aa11.09□□□□□ -0.63
LIM2-201ENST00000221973 LINC01546A6NGU7 62 aa11.09□□□□□ -0.63
LIM2-201ENST00000221973 C1orf196B1AJZ1 125 aa11.09□□□□□ -0.63
LIM2-201ENST00000221973 HIST1H2BKO60814 126 aa11.09□□□□□ -0.63
LIM2-201ENST00000221973 HIST1H2BJP06899 126 aa11.09□□□□□ -0.63
LIM2-201ENST00000221973 BTF3P20290 206 aaKnown RBP11.09□□□□□ -0.63
LIM2-201ENST00000221973 HIST1H2BOP23527 126 aa11.09□□□□□ -0.63
LIM2-201ENST00000221973 HIST1H2BBP33778 126 aa11.09□□□□□ -0.63
LIM2-201ENST00000221973 HIST1H2BDP58876 126 aa11.09□□□□□ -0.63
LIM2-201ENST00000221973 HIST1H2BCP62807 126 aa11.09□□□□□ -0.63
LIM2-201ENST00000221973 HIST2H2BEQ16778 126 aa11.09□□□□□ -0.63
LIM2-201ENST00000221973 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.09□□□□□ -0.63
LIM2-201ENST00000221973 HIST1H2BHQ93079 126 aa11.09□□□□□ -0.63
LIM2-201ENST00000221973 HIST1H2BNQ99877 126 aa11.09□□□□□ -0.63
LIM2-201ENST00000221973 HIST1H2BMQ99879 126 aa11.09□□□□□ -0.63
LIM2-201ENST00000221973 AP5S1Q9NUS5 200 aa11.09□□□□□ -0.63
LIM2-201ENST00000221973 HSPG2P98160 4391 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms