RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 MKI67P46013 3256 aaKnown RBP11.4□□□□□ -0.58
NDFIP2-201ENST00000218652 DIRC1Q969H9 104 aa11.4□□□□□ -0.59
NDFIP2-201ENST00000218652 BRWD1-AS2P59051 145 aa11.39□□□□□ -0.59
NDFIP2-201ENST00000218652 LINC01548A6NM66 108 aa11.39□□□□□ -0.59
NDFIP2-201ENST00000218652 MED14OSP0DP75 135 aa11.39□□□□□ -0.59
NDFIP2-201ENST00000218652 TRAV23DV6A0A075B6W5 121 aa11.39□□□□□ -0.59
NDFIP2-201ENST00000218652 ADORA2A-AS1P86434 159 aa11.39□□□□□ -0.59
NDFIP2-201ENST00000218652 SPTBN4Q9H254 2564 aa11.38□□□□□ -0.59
NDFIP2-201ENST00000218652 LINC00643Q86TS7 51 aa11.37□□□□□ -0.59
NDFIP2-201ENST00000218652 P0C879 139 aa11.37□□□□□ -0.59
NDFIP2-201ENST00000218652 Q6ZPA2 131 aa11.37□□□□□ -0.59
NDFIP2-201ENST00000218652 PLXNA2O75051 1894 aa11.37□□□□□ -0.59
NDFIP2-201ENST00000218652 COL4A3Q01955 1670 aa11.37□□□□□ -0.59
NDFIP2-201ENST00000218652 UBE2AP49459 152 aa11.37□□□□□ -0.59
NDFIP2-201ENST00000218652 TMEM256-PLSCR3K7ERE1 68 aa11.37□□□□□ -0.59
NDFIP2-201ENST00000218652 RNF183Q96D59 192 aa11.37□□□□□ -0.59
NDFIP2-201ENST00000218652 DSCAMO60469 2012 aa11.36□□□□□ -0.59
NDFIP2-201ENST00000218652 A0A1W2PNU3 283 aaPredicted RBP11.36□□□□□ -0.59
NDFIP2-201ENST00000218652 PRO0255Q9UI72 69 aa11.36□□□□□ -0.59
NDFIP2-201ENST00000218652 PCNX3Q9H6A9 2034 aa11.36□□□□□ -0.59
NDFIP2-201ENST00000218652 TEX49A0A1B0GTD5 131 aa11.36□□□□□ -0.59
NDFIP2-201ENST00000218652 C20orf197Q8N268 126 aa11.36□□□□□ -0.59
NDFIP2-201ENST00000218652 CDKN2A-AS1Q9UH64 79 aa11.36□□□□□ -0.59
NDFIP2-201ENST00000218652 A0A0J9YXY3 114 aa11.36□□□□□ -0.59
NDFIP2-201ENST00000218652 NFE4Q86UQ8 179 aa11.36□□□□□ -0.59
NDFIP2-201ENST00000218652 MLST8Q9BVC4 326 aa11.36□□□□□ -0.59
NDFIP2-201ENST00000218652 TM2D2Q9BX73 214 aa11.36□□□□□ -0.59
NDFIP2-201ENST00000218652 TRBV6-1A0A0K0K1D8 114 aa11.36□□□□□ -0.59
NDFIP2-201ENST00000218652 KIAA1671Q9BY89 1806 aa11.35□□□□□ -0.59
NDFIP2-201ENST00000218652 MT-ATP8P03928 68 aa11.35□□□□□ -0.59
NDFIP2-201ENST00000218652 CXCL5P42830 114 aa11.35□□□□□ -0.59
NDFIP2-201ENST00000218652 TP53TG3Q9ULZ0 132 aa11.35□□□□□ -0.59
NDFIP2-201ENST00000218652 FASNP49327 2511 aaKnown RBP11.35□□□□□ -0.59
NDFIP2-201ENST00000218652 MIAQ16674 131 aa11.34□□□□□ -0.59
NDFIP2-201ENST00000218652 Q6ZTI0 123 aa11.34□□□□□ -0.59
NDFIP2-201ENST00000218652 ZNF295-AS1Q8N0V1 137 aa11.34□□□□□ -0.59
NDFIP2-201ENST00000218652 TRBV10-1A0A0K0K1A3 114 aa11.34□□□□□ -0.59
NDFIP2-201ENST00000218652 F8W735 103 aaPredicted RBP11.34□□□□□ -0.59
NDFIP2-201ENST00000218652 NDUFC2O95298 119 aa11.34□□□□□ -0.59
NDFIP2-201ENST00000218652 CCDC140Q96MF4 163 aa11.34□□□□□ -0.59
NDFIP2-201ENST00000218652 IGF1P05019 195 aa11.34□□□□□ -0.59
NDFIP2-201ENST00000218652 HIST2H2BDQ6DRA6 164 aa11.34□□□□□ -0.59
NDFIP2-201ENST00000218652 SVIPQ8NHG7 77 aa11.34□□□□□ -0.59
NDFIP2-201ENST00000218652 FAM110AQ9BQ89 295 aa11.34□□□□□ -0.59
NDFIP2-201ENST00000218652 SIRPDQ9H106 197 aa11.34□□□□□ -0.59
NDFIP2-201ENST00000218652 FRMPD3Q5JV73 1810 aa11.34□□□□□ -0.59
NDFIP2-201ENST00000218652 A0A096LNI7 61 aa11.34□□□□□ -0.59
NDFIP2-201ENST00000218652 TMEM263Q8WUH6 116 aaKnown RBP11.33□□□□□ -0.6
NDFIP2-201ENST00000218652 H0Y9J4 135 aa11.32□□□□□ -0.6
NDFIP2-201ENST00000218652 IGLC6P0CF74 106 aa11.32□□□□□ -0.6
NDFIP2-201ENST00000218652 POLQO75417 2590 aa11.32□□□□□ -0.6
NDFIP2-201ENST00000218652 ANKRD11Q6UB99 2663 aaPredicted RBP11.32□□□□□ -0.6
NDFIP2-201ENST00000218652 IGKV2-24A0A0C4DH68 120 aa11.32□□□□□ -0.6
NDFIP2-201ENST00000218652 BRK1Q8WUW1 75 aa11.32□□□□□ -0.6
NDFIP2-201ENST00000218652 HIGD2AQ9BW72 106 aa11.32□□□□□ -0.6
NDFIP2-201ENST00000218652 PCDH15Q96QU1 1955 aa11.31□□□□□ -0.6
NDFIP2-201ENST00000218652 ZNF106Q9H2Y7 1883 aaKnown RBP11.31□□□□□ -0.6
NDFIP2-201ENST00000218652 SDIM1Q6ZPB5 146 aa11.31□□□□□ -0.6
NDFIP2-201ENST00000218652 MBD6Q96DN6 1003 aa11.31□□□□□ -0.6
NDFIP2-201ENST00000218652 SPRY4Q9C004 299 aa11.31□□□□□ -0.6
NDFIP2-201ENST00000218652 BPY2O14599 106 aa11.31□□□□□ -0.6
NDFIP2-201ENST00000218652 C1orf229Q6ZS94 237 aaPredicted RBP11.31□□□□□ -0.6
NDFIP2-201ENST00000218652 COX7BP24311 80 aa11.3□□□□□ -0.6
NDFIP2-201ENST00000218652 NDUFV3P56181 108 aaKnown RBP11.3□□□□□ -0.6
NDFIP2-201ENST00000218652 LINC00269Q8N2A0 174 aa11.3□□□□□ -0.6
NDFIP2-201ENST00000218652 MAPKAPK5-AS1Q8N8E1 139 aa11.3□□□□□ -0.6
NDFIP2-201ENST00000218652 MAP6D1Q9H9H5 199 aa11.3□□□□□ -0.6
NDFIP2-201ENST00000218652 H3BQ85 93 aa11.29□□□□□ -0.6
NDFIP2-201ENST00000218652 SLPIP03973 132 aa11.29□□□□□ -0.6
NDFIP2-201ENST00000218652 MYCNOSP40205 109 aa11.29□□□□□ -0.6
NDFIP2-201ENST00000218652 PDE6GP18545 87 aa11.29□□□□□ -0.6
NDFIP2-201ENST00000218652 LMO4P61968 165 aa11.28□□□□□ -0.6
NDFIP2-201ENST00000218652 PIK3CD-AS1Q5SR53 167 aa11.28□□□□□ -0.6
NDFIP2-201ENST00000218652 SCXQ7RTU7 201 aa11.28□□□□□ -0.6
NDFIP2-201ENST00000218652 LINC00467Q9BRT7 94 aa11.28□□□□□ -0.6
NDFIP2-201ENST00000218652 UPK3BQ9BT76 320 aa11.28□□□□□ -0.6
NDFIP2-201ENST00000218652 A6NDX4 124 aa11.28□□□□□ -0.6
NDFIP2-201ENST00000218652 ZNF22P17026 224 aaPredicted RBP11.28□□□□□ -0.6
NDFIP2-201ENST00000218652 C22orf34Q6ZV56 151 aa11.28□□□□□ -0.6
NDFIP2-201ENST00000218652 NEXN-AS1Q8NBZ9 246 aa11.27□□□□□ -0.6
NDFIP2-201ENST00000218652 SMAD5-AS1Q9Y6J3 95 aa11.27□□□□□ -0.6
NDFIP2-201ENST00000218652 TNRC6BQ9UPQ9 1833 aaKnown RBP11.27□□□□□ -0.61
NDFIP2-201ENST00000218652 SPANXB1Q9NS25 103 aaPredicted RBP11.27□□□□□ -0.61
NDFIP2-201ENST00000218652 COL4A4P53420 1690 aaPredicted RBP11.26□□□□□ -0.61
NDFIP2-201ENST00000218652 DAZAP2Q15038 168 aaPredicted RBP11.26□□□□□ -0.61
NDFIP2-201ENST00000218652 ZFAND2AQ8N6M9 145 aa11.26□□□□□ -0.61
NDFIP2-201ENST00000218652 KIAA1549Q9HCM3 1950 aa11.26□□□□□ -0.61
NDFIP2-201ENST00000218652 TMEM89A2RUT3 159 aa11.26□□□□□ -0.61
NDFIP2-201ENST00000218652 SPTSSBQ8NFR3 76 aa11.26□□□□□ -0.61
NDFIP2-201ENST00000218652 XAGE1AQ9HD64 81 aa11.26□□□□□ -0.61
NDFIP2-201ENST00000218652 CRIP1P50238 77 aa11.26□□□□□ -0.61
NDFIP2-201ENST00000218652 C4orf48Q5BLP8 95 aa11.26□□□□□ -0.61
NDFIP2-201ENST00000218652 Q8N976 141 aa11.26□□□□□ -0.61
NDFIP2-201ENST00000218652 OBSL1O75147 1896 aa11.25□□□□□ -0.61
NDFIP2-201ENST00000218652 CRIP3Q6Q6R5 217 aa11.25□□□□□ -0.61
NDFIP2-201ENST00000218652 IGLV4-3A0A075B6K6 122 aa11.25□□□□□ -0.61
NDFIP2-201ENST00000218652 PKIGQ9Y2B9 76 aa11.25□□□□□ -0.61
NDFIP2-201ENST00000218652 IGF2-ASQ6U949 168 aa11.25□□□□□ -0.61
NDFIP2-201ENST00000218652 Q8NA96 180 aa11.25□□□□□ -0.61
NDFIP2-201ENST00000218652 K7EQG2 157 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms