RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 Q8N2B8 174 aa9.69□□□□□ -0.86
SRP54-201ENST00000216774 DNAJC30Q96LL9 226 aa9.69□□□□□ -0.86
SRP54-201ENST00000216774 SPANXDQ9BXN6 97 aa9.69□□□□□ -0.86
SRP54-201ENST00000216774 SPANXCQ9NY87 97 aa9.69□□□□□ -0.86
SRP54-201ENST00000216774 UBE2D4Q9Y2X8 147 aa9.69□□□□□ -0.86
SRP54-201ENST00000216774 FHL3Q13643 280 aa9.68□□□□□ -0.86
SRP54-201ENST00000216774 CEMP1Q6PRD7 247 aaPredicted RBP9.68□□□□□ -0.86
SRP54-201ENST00000216774 MAPK1IP1LQ8NDC0 245 aa9.68□□□□□ -0.86
SRP54-201ENST00000216774 VSIG2Q96IQ7 327 aa9.68□□□□□ -0.86
SRP54-201ENST00000216774 USP9XQ93008 2570 aaPredicted RBP9.68□□□□□ -0.86
SRP54-201ENST00000216774 DEFB136Q30KP8 78 aa9.68□□□□□ -0.86
SRP54-201ENST00000216774 TMEM61Q8N0U2 210 aa9.68□□□□□ -0.86
SRP54-201ENST00000216774 BEX4Q9NWD9 120 aaPredicted RBP9.68□□□□□ -0.86
SRP54-201ENST00000216774 NDUFA12Q9UI09 145 aa9.68□□□□□ -0.86
SRP54-201ENST00000216774 TRAV8-3A0A0A6YYJ7 113 aa9.67□□□□□ -0.86
SRP54-201ENST00000216774 TRBV30A0A0K0K1B3 111 aa9.67□□□□□ -0.86
SRP54-201ENST00000216774 C9JAW5 83 aa9.67□□□□□ -0.86
SRP54-201ENST00000216774 IGHV3-53P01767 116 aa9.67□□□□□ -0.86
SRP54-201ENST00000216774 ATXN8Q156A1 80 aa9.67□□□□□ -0.86
SRP54-201ENST00000216774 BEAN1Q3B7T3 259 aa9.67□□□□□ -0.86
SRP54-201ENST00000216774 Q6ZSN1 163 aa9.67□□□□□ -0.86
SRP54-201ENST00000216774 C11orf72Q8NBR9 251 aa9.67□□□□□ -0.86
SRP54-201ENST00000216774 H7C2G1 150 aa9.67□□□□□ -0.86
SRP54-201ENST00000216774 IGHV4-31P0DP07 118 aa9.67□□□□□ -0.86
SRP54-201ENST00000216774 Q1RN00 199 aa9.67□□□□□ -0.86
SRP54-201ENST00000216774 C18orf65Q6ZTR6 163 aa9.67□□□□□ -0.86
SRP54-201ENST00000216774 Q6ZUT4 128 aa9.67□□□□□ -0.86
SRP54-201ENST00000216774 C4orf3Q8WVX3 66 aa9.67□□□□□ -0.86
SRP54-201ENST00000216774 RNF183Q96D59 192 aa9.67□□□□□ -0.86
SRP54-201ENST00000216774 LINC01600Q96MT4 127 aa9.67□□□□□ -0.86
SRP54-201ENST00000216774 MAP6D1Q9H9H5 199 aa9.67□□□□□ -0.86
SRP54-201ENST00000216774 ADARB2-AS1A8MUL3 147 aa9.66□□□□□ -0.86
SRP54-201ENST00000216774 TMEM262E9PQX1 116 aa9.66□□□□□ -0.86
SRP54-201ENST00000216774 INSP01308 110 aa9.66□□□□□ -0.86
SRP54-201ENST00000216774 SPINK8P0C7L1 97 aa9.66□□□□□ -0.86
SRP54-201ENST00000216774 MIAQ16674 131 aa9.66□□□□□ -0.86
SRP54-201ENST00000216774 LINC01587Q99440 93 aa9.66□□□□□ -0.86
SRP54-201ENST00000216774 Q9UF83 564 aa9.66□□□□□ -0.86
SRP54-201ENST00000216774 PRM2P04554 102 aa9.65□□□□□ -0.86
SRP54-201ENST00000216774 XGP55808 180 aa9.65□□□□□ -0.86
SRP54-201ENST00000216774 RNASE13Q5GAN3 156 aaKnown RBP9.65□□□□□ -0.86
SRP54-201ENST00000216774 ZFAND6Q6FIF0 208 aa9.65□□□□□ -0.86
SRP54-201ENST00000216774 TIMM17BO60830 172 aa9.65□□□□□ -0.87
SRP54-201ENST00000216774 PRSS2P07478 247 aa9.65□□□□□ -0.87
SRP54-201ENST00000216774 IGSF10Q6WRI0 2623 aa9.64□□□□□ -0.87
SRP54-201ENST00000216774 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.64□□□□□ -0.87
SRP54-201ENST00000216774 IGKV2-29A2NJV5 120 aaPredicted RBP9.64□□□□□ -0.87
SRP54-201ENST00000216774 RS1O15537 224 aa9.64□□□□□ -0.87
SRP54-201ENST00000216774 MT-ATP8P03928 68 aa9.64□□□□□ -0.87
SRP54-201ENST00000216774 LINC01620Q4KN68 170 aa9.64□□□□□ -0.87
SRP54-201ENST00000216774 ADAMTSL4-AS1Q5T5F5 129 aa9.64□□□□□ -0.87
SRP54-201ENST00000216774 DYNLRB2Q8TF09 96 aa9.64□□□□□ -0.87
SRP54-201ENST00000216774 CLUHP3Q96NS8 147 aa9.64□□□□□ -0.87
SRP54-201ENST00000216774 GEMIN7Q9H840 131 aaKnown RBP9.64□□□□□ -0.87
SRP54-201ENST00000216774 YAE1D1Q9NRH1 226 aa9.64□□□□□ -0.87
SRP54-201ENST00000216774 SORL1Q92673 2214 aa9.64□□□□□ -0.87
SRP54-201ENST00000216774 UTP20O75691 2785 aaKnown RBP9.64□□□□□ -0.87
SRP54-201ENST00000216774 TRIAP1O43715 76 aa9.63□□□□□ -0.87
SRP54-201ENST00000216774 NACAE9PAV3 2078 aa9.63□□□□□ -0.87
SRP54-201ENST00000216774 MXRA5Q9NR99 2828 aa9.63□□□□□ -0.87
SRP54-201ENST00000216774 IGLV5-45A0A087WSX0 123 aa9.63□□□□□ -0.87
SRP54-201ENST00000216774 TIRAPP58753 221 aa9.63□□□□□ -0.87
SRP54-201ENST00000216774 CKS1BP61024 79 aa9.63□□□□□ -0.87
SRP54-201ENST00000216774 DEFB114Q30KQ6 69 aa9.63□□□□□ -0.87
SRP54-201ENST00000216774 ZANQ9Y493 2812 aa9.63□□□□□ -0.87
SRP54-201ENST00000216774 IFITM1P13164 125 aa9.62□□□□□ -0.87
SRP54-201ENST00000216774 ANKRD17O75179 2603 aaKnown RBP9.62□□□□□ -0.87
SRP54-201ENST00000216774 ICOSQ9Y6W8 199 aa9.62□□□□□ -0.87
SRP54-201ENST00000216774 CREBBPQ92793 2442 aa9.61□□□□□ -0.87
SRP54-201ENST00000216774 TRBV10-2A0A0K0K1G8 114 aa9.61□□□□□ -0.87
SRP54-201ENST00000216774 USP9YO00507 2555 aaPredicted RBP9.61□□□□□ -0.87
SRP54-201ENST00000216774 NDUFA1O15239 70 aa9.61□□□□□ -0.87
SRP54-201ENST00000216774 COX6CP09669 75 aa9.61□□□□□ -0.87
SRP54-201ENST00000216774 RPL13AP40429 203 aaKnown RBP9.61□□□□□ -0.87
SRP54-201ENST00000216774 CSMD2Q7Z408 3487 aa9.6□□□□□ -0.87
SRP54-201ENST00000216774 FBN2P35556 2912 aa9.6□□□□□ -0.87
SRP54-201ENST00000216774 IGHV3-38A0A0C4DH36 116 aa9.6□□□□□ -0.87
SRP54-201ENST00000216774 CDKN2A-AS1Q9UH64 79 aa9.6□□□□□ -0.87
SRP54-201ENST00000216774 PRRC2AP48634 2157 aaKnown RBP9.6□□□□□ -0.87
SRP54-201ENST00000216774 CACNA1AO00555 2505 aa9.6□□□□□ -0.87
SRP54-201ENST00000216774 A8MZ25 164 aa9.59□□□□□ -0.87
SRP54-201ENST00000216774 KHDC1LQ5JSQ8 128 aa9.59□□□□□ -0.87
SRP54-201ENST00000216774 DGAT2L7PQ6IED9 249 aa9.59□□□□□ -0.87
SRP54-201ENST00000216774 NTN5Q8WTR8 489 aaPredicted RBP9.59□□□□□ -0.87
SRP54-201ENST00000216774 MYO18BQ8IUG5 2567 aa9.58□□□□□ -0.88
SRP54-201ENST00000216774 TRAV25A0A0B4J276 109 aa9.58□□□□□ -0.88
SRP54-201ENST00000216774 IL17DQ8TAD2 202 aa9.58□□□□□ -0.88
SRP54-201ENST00000216774 TMEM101Q96IK0 257 aa9.58□□□□□ -0.88
SRP54-201ENST00000216774 HERVK_113P63121 156 aa9.58□□□□□ -0.88
SRP54-201ENST00000216774 CIRBPQ14011 172 aaKnown RBP9.58□□□□□ -0.88
SRP54-201ENST00000216774 FAM19A3Q7Z5A8 133 aa9.58□□□□□ -0.88
SRP54-201ENST00000216774 CR1P17927 2039 aa9.57□□□□□ -0.88
SRP54-201ENST00000216774 IGLV5-39A0A0G2JS06 123 aa9.57□□□□□ -0.88
SRP54-201ENST00000216774 ODF3L2Q3SX64 289 aa9.57□□□□□ -0.88
SRP54-201ENST00000216774 CSDC2Q9Y534 153 aaKnown RBP9.57□□□□□ -0.88
SRP54-201ENST00000216774 IGHV3OR16-12A0A075B7B8 117 aa9.57□□□□□ -0.88
SRP54-201ENST00000216774 TRBV10-1A0A0K0K1A3 114 aa9.57□□□□□ -0.88
SRP54-201ENST00000216774 H3BT86 120 aa9.57□□□□□ -0.88
SRP54-201ENST00000216774 LRRC75A-AS1Q8N1F1 130 aa9.57□□□□□ -0.88
SRP54-201ENST00000216774 XCL2Q9UBD3 114 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms