RNA–Protein interactions for RNA: ENST00000216274.9

RIPK3-201, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK3, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-201ENST00000216274 TTTY13Q9BZ97 58 aa9.29□□□□□ -0.92
RIPK3-201ENST00000216274 IGLV4-69A0A075B6H9 119 aa9.28□□□□□ -0.92
RIPK3-201ENST00000216274 MYMXA0A1B0GTQ4 84 aa9.28□□□□□ -0.92
RIPK3-201ENST00000216274 IGHV3-53P01767 116 aa9.28□□□□□ -0.92
RIPK3-201ENST00000216274 MAPKAPK5-AS1Q8N8E1 139 aa9.28□□□□□ -0.92
RIPK3-201ENST00000216274 IL17DQ8TAD2 202 aa9.28□□□□□ -0.92
RIPK3-201ENST00000216274 DEFB104AQ8WTQ1 72 aa9.28□□□□□ -0.92
RIPK3-201ENST00000216274 C11orf86A6NJI1 115 aa9.27□□□□□ -0.93
RIPK3-201ENST00000216274 P0DMU3 169 aa9.27□□□□□ -0.93
RIPK3-201ENST00000216274 FAM231AP0DMU4 169 aa9.27□□□□□ -0.93
RIPK3-201ENST00000216274 FAM231CP0DMU5 169 aa9.27□□□□□ -0.93
RIPK3-201ENST00000216274 PTTG1IPP53801 180 aa9.27□□□□□ -0.93
RIPK3-201ENST00000216274 PRADC1Q9BSG0 188 aa9.27□□□□□ -0.93
RIPK3-201ENST00000216274 CMYA5Q8N3K9 4069 aa9.27□□□□□ -0.93
RIPK3-201ENST00000216274 IGHV3OR16-12A0A075B7B8 117 aa9.26□□□□□ -0.93
RIPK3-201ENST00000216274 AZU1P20160 251 aa9.26□□□□□ -0.93
RIPK3-201ENST00000216274 GCSHP23434 173 aa9.26□□□□□ -0.93
RIPK3-201ENST00000216274 TMEM263Q8WUH6 116 aaKnown RBP9.26□□□□□ -0.93
RIPK3-201ENST00000216274 C1QTNF4Q9BXJ3 329 aa9.26□□□□□ -0.93
RIPK3-201ENST00000216274 PYGO1Q9Y3Y4 419 aa9.26□□□□□ -0.93
RIPK3-201ENST00000216274 CRYBA4P53673 196 aa9.25□□□□□ -0.93
RIPK3-201ENST00000216274 NFE4Q86UQ8 179 aa9.25□□□□□ -0.93
RIPK3-201ENST00000216274 RNASE8Q8TDE3 154 aaKnown RBP9.25□□□□□ -0.93
RIPK3-201ENST00000216274 C9orf118A6NHY6 69 aa9.25□□□□□ -0.93
RIPK3-201ENST00000216274 PF4P02776 101 aa9.25□□□□□ -0.93
RIPK3-201ENST00000216274 Q6ZSN1 163 aa9.25□□□□□ -0.93
RIPK3-201ENST00000216274 CEND1Q8N111 149 aa9.25□□□□□ -0.93
RIPK3-201ENST00000216274 OR4C5Q8NGB2 326 aa9.25□□□□□ -0.93
RIPK3-201ENST00000216274 TM2D2Q9BX73 214 aa9.25□□□□□ -0.93
RIPK3-201ENST00000216274 MGAM2Q2M2H8 2515 aa9.24□□□□□ -0.93
RIPK3-201ENST00000216274 IGLV4-3A0A075B6K6 122 aa9.24□□□□□ -0.93
RIPK3-201ENST00000216274 TRGV1A0A0A0MS02 117 aa9.24□□□□□ -0.93
RIPK3-201ENST00000216274 SMIM13P0DJ93 91 aa9.24□□□□□ -0.93
RIPK3-201ENST00000216274 VCX2Q9H322 139 aa9.24□□□□□ -0.93
RIPK3-201ENST00000216274 C19orf73Q9NVV2 129 aa9.24□□□□□ -0.93
RIPK3-201ENST00000216274 ZNF815PA8K554 130 aa9.23□□□□□ -0.93
RIPK3-201ENST00000216274 CCL25O15444 150 aa9.23□□□□□ -0.93
RIPK3-201ENST00000216274 TMEM170BQ5T4T1 132 aa9.23□□□□□ -0.93
RIPK3-201ENST00000216274 WFDC9Q8NEX5 89 aa9.23□□□□□ -0.93
RIPK3-201ENST00000216274 TRAV4A0A0B4J268 109 aa9.23□□□□□ -0.93
RIPK3-201ENST00000216274 FXYD2P54710 66 aa9.23□□□□□ -0.93
RIPK3-201ENST00000216274 COTL1Q14019 142 aa9.23□□□□□ -0.93
RIPK3-201ENST00000216274 C16orf74Q96GX8 76 aa9.23□□□□□ -0.93
RIPK3-201ENST00000216274 HIST1H4GQ99525 98 aa9.23□□□□□ -0.93
RIPK3-201ENST00000216274 SPANXA1Q9NS26 97 aa9.23□□□□□ -0.93
RIPK3-201ENST00000216274 RPL35AP18077 110 aaKnown RBP9.22□□□□□ -0.93
RIPK3-201ENST00000216274 EMP1P54849 157 aa9.22□□□□□ -0.93
RIPK3-201ENST00000216274 DAZ2Q13117 558 aaKnown RBP9.22□□□□□ -0.93
RIPK3-201ENST00000216274 AMMECR1LQ6DCA0 310 aa9.22□□□□□ -0.93
RIPK3-201ENST00000216274 LINC00482Q8N8I6 264 aa9.22□□□□□ -0.93
RIPK3-201ENST00000216274 ZNRF2Q8NHG8 242 aa9.22□□□□□ -0.93
RIPK3-201ENST00000216274 FBN3Q75N90 2809 aa9.22□□□□□ -0.93
RIPK3-201ENST00000216274 GIG44P09565 113 aaPredicted RBP9.21□□□□□ -0.93
RIPK3-201ENST00000216274 OPRPNQ99935 248 aaPredicted RBP9.21□□□□□ -0.93
RIPK3-201ENST00000216274 CHCHD7Q9BUK0 85 aa9.21□□□□□ -0.93
RIPK3-201ENST00000216274 VWFP04275 2813 aa9.21□□□□□ -0.94
RIPK3-201ENST00000216274 PKD1L1Q8TDX9 2849 aa9.21□□□□□ -0.94
RIPK3-201ENST00000216274 TRBV7-3A0A075B6L6 115 aa9.21□□□□□ -0.94
RIPK3-201ENST00000216274 TRBV10-1A0A0K0K1A3 114 aa9.21□□□□□ -0.94
RIPK3-201ENST00000216274 CIDEAO60543 219 aa9.21□□□□□ -0.94
RIPK3-201ENST00000216274 AMELXQ99217 191 aa9.21□□□□□ -0.94
RIPK3-201ENST00000216274 NACAE9PAV3 2078 aa9.21□□□□□ -0.94
RIPK3-201ENST00000216274 SCGB1D4Q6XE38 83 aa9.2□□□□□ -0.94
RIPK3-201ENST00000216274 WFDC10AQ9H1F0 79 aa9.2□□□□□ -0.94
RIPK3-201ENST00000216274 K7EQD1 137 aa9.19□□□□□ -0.94
RIPK3-201ENST00000216274 LEPROTO15243 131 aa9.19□□□□□ -0.94
RIPK3-201ENST00000216274 RPL36AP83881 106 aaKnown RBP9.19□□□□□ -0.94
RIPK3-201ENST00000216274 GTF2H5Q6ZYL4 71 aa9.19□□□□□ -0.94
RIPK3-201ENST00000216274 RPL36ALQ969Q0 106 aaKnown RBP9.19□□□□□ -0.94
RIPK3-201ENST00000216274 RAB37Q96AX2 223 aa9.19□□□□□ -0.94
RIPK3-201ENST00000216274 TMEM223A0PJW6 202 aa9.19□□□□□ -0.94
RIPK3-201ENST00000216274 H3BUT2 72 aa9.19□□□□□ -0.94
RIPK3-201ENST00000216274 ZNF22P17026 224 aaPredicted RBP9.19□□□□□ -0.94
RIPK3-201ENST00000216274 LGALS3P17931 250 aaKnown RBP9.19□□□□□ -0.94
RIPK3-201ENST00000216274 RRN3P1Q2M238 152 aa9.19□□□□□ -0.94
RIPK3-201ENST00000216274 SAMD5Q5TGI4 173 aa9.19□□□□□ -0.94
RIPK3-201ENST00000216274 Q6ZTI0 123 aa9.19□□□□□ -0.94
RIPK3-201ENST00000216274 PHLDA1Q8WV24 401 aaPredicted RBP9.19□□□□□ -0.94
RIPK3-201ENST00000216274 PLEKHB2Q96CS7 222 aa9.19□□□□□ -0.94
RIPK3-201ENST00000216274 ZNF479Q96JC4 524 aa9.19□□□□□ -0.94
RIPK3-201ENST00000216274 NOP10Q9NPE3 64 aaKnown RBP9.19□□□□□ -0.94
RIPK3-201ENST00000216274 NHP2Q9NX24 153 aaKnown RBP9.19□□□□□ -0.94
RIPK3-201ENST00000216274 A0A0J9YXV3 536 aa9.18□□□□□ -0.94
RIPK3-201ENST00000216274 INSL3P51460 131 aa9.18□□□□□ -0.94
RIPK3-201ENST00000216274 CSNK1G2-AS1Q8NCQ2 148 aa9.18□□□□□ -0.94
RIPK3-201ENST00000216274 TIMM21Q9BVV7 248 aa9.18□□□□□ -0.94
RIPK3-201ENST00000216274 Q9UF83 564 aa9.18□□□□□ -0.94
RIPK3-201ENST00000216274 UBE2D4Q9Y2X8 147 aa9.18□□□□□ -0.94
RIPK3-201ENST00000216274 GAGE10A6NGK3 116 aa9.17□□□□□ -0.94
RIPK3-201ENST00000216274 J3QQQ9 107 aa9.17□□□□□ -0.94
RIPK3-201ENST00000216274 KPRPQ5T749 579 aaPredicted RBP9.17□□□□□ -0.94
RIPK3-201ENST00000216274 OVOL2Q9BRP0 275 aa9.17□□□□□ -0.94
RIPK3-201ENST00000216274 NOTCH3Q9UM47 2321 aa9.17□□□□□ -0.94
RIPK3-201ENST00000216274 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.17□□□□□ -0.94
RIPK3-201ENST00000216274 IGHV3-38A0A0C4DH36 116 aa9.17□□□□□ -0.94
RIPK3-201ENST00000216274 TMEM238LA0A1B0GVL6 79 aa9.17□□□□□ -0.94
RIPK3-201ENST00000216274 A0A1W2PPM0 123 aa9.17□□□□□ -0.94
RIPK3-201ENST00000216274 IGKV2-29A2NJV5 120 aaPredicted RBP9.17□□□□□ -0.94
RIPK3-201ENST00000216274 A6NJY4 79 aa9.17□□□□□ -0.94
RIPK3-201ENST00000216274 K7EP13 123 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms