RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 PPP1R17O96001 155 aa7.8□□□□□ -1.16
APOBEC3D-201ENST00000216099 SPATA3Q8NHX4 192 aa7.8□□□□□ -1.16
APOBEC3D-201ENST00000216099 C9orf85Q96MD7 179 aa7.8□□□□□ -1.16
APOBEC3D-201ENST00000216099 C20orf78Q9BR46 151 aa7.8□□□□□ -1.16
APOBEC3D-201ENST00000216099 AGRNO00468 2067 aa7.8□□□□□ -1.16
APOBEC3D-201ENST00000216099 TRAV12-3A0A0B4J271 114 aa7.8□□□□□ -1.16
APOBEC3D-201ENST00000216099 K7EMI3 77 aa7.8□□□□□ -1.16
APOBEC3D-201ENST00000216099 IFI27L1Q96BM0 104 aa7.8□□□□□ -1.16
APOBEC3D-201ENST00000216099 SPANXB1Q9NS25 103 aaPredicted RBP7.8□□□□□ -1.16
APOBEC3D-201ENST00000216099 MEIG1Q5JSS6 88 aa7.79□□□□□ -1.16
APOBEC3D-201ENST00000216099 KIF25-AS1Q9Y6Z4 181 aa7.79□□□□□ -1.16
APOBEC3D-201ENST00000216099 IGHV3-16A0A0C4DH30 117 aa7.79□□□□□ -1.16
APOBEC3D-201ENST00000216099 F8W1H4 67 aa7.79□□□□□ -1.16
APOBEC3D-201ENST00000216099 CRYGDP07320 174 aa7.79□□□□□ -1.16
APOBEC3D-201ENST00000216099 HLA-DRB4P13762 266 aa7.79□□□□□ -1.16
APOBEC3D-201ENST00000216099 SMIM2Q9BVW6 85 aa7.79□□□□□ -1.16
APOBEC3D-201ENST00000216099 PKIGQ9Y2B9 76 aa7.79□□□□□ -1.16
APOBEC3D-201ENST00000216099 ZNF256Q9Y2P7 627 aaPredicted RBP7.79□□□□□ -1.16
APOBEC3D-201ENST00000216099 HLA-DRB4X5D2U9 266 aa7.79□□□□□ -1.16
APOBEC3D-201ENST00000216099 IGHV1OR15-1A0A075B7D0 117 aa7.78□□□□□ -1.16
APOBEC3D-201ENST00000216099 A0A087WZ39 114 aa7.78□□□□□ -1.16
APOBEC3D-201ENST00000216099 CD7P09564 240 aa7.78□□□□□ -1.16
APOBEC3D-201ENST00000216099 Q6ZUT4 128 aa7.78□□□□□ -1.16
APOBEC3D-201ENST00000216099 SYT8Q8NBV8 401 aa7.78□□□□□ -1.16
APOBEC3D-201ENST00000216099 ZNRF2Q8NHG8 242 aa7.78□□□□□ -1.16
APOBEC3D-201ENST00000216099 DYNLRB2Q8TF09 96 aa7.78□□□□□ -1.16
APOBEC3D-201ENST00000216099 TRAV26-2A0A0B4J265 109 aa7.78□□□□□ -1.16
APOBEC3D-201ENST00000216099 DEFB114Q30KQ6 69 aa7.78□□□□□ -1.16
APOBEC3D-201ENST00000216099 TMEM61Q8N0U2 210 aa7.78□□□□□ -1.16
APOBEC3D-201ENST00000216099 C14orf178Q8N769 122 aaPredicted RBP7.78□□□□□ -1.16
APOBEC3D-201ENST00000216099 LINC00315P59091 139 aa7.77□□□□□ -1.17
APOBEC3D-201ENST00000216099 WFDC2Q14508 124 aa7.77□□□□□ -1.17
APOBEC3D-201ENST00000216099 APOC4P55056 127 aa7.77□□□□□ -1.17
APOBEC3D-201ENST00000216099 NDUFV3P56181 108 aaKnown RBP7.77□□□□□ -1.17
APOBEC3D-201ENST00000216099 DEFB131AP59861 70 aa7.77□□□□□ -1.17
APOBEC3D-201ENST00000216099 SPINK13Q1W4C9 94 aa7.77□□□□□ -1.17
APOBEC3D-201ENST00000216099 TMEM158Q8WZ71 300 aa7.77□□□□□ -1.17
APOBEC3D-201ENST00000216099 KIR2DL4Q99706 377 aa7.77□□□□□ -1.17
APOBEC3D-201ENST00000216099 A0A1B0GX51 115 aa7.76□□□□□ -1.17
APOBEC3D-201ENST00000216099 H3BMM0 161 aa7.76□□□□□ -1.17
APOBEC3D-201ENST00000216099 IGKV3-20P01619 116 aa7.76□□□□□ -1.17
APOBEC3D-201ENST00000216099 EDA2RQ9HAV5 297 aa7.76□□□□□ -1.17
APOBEC3D-201ENST00000216099 MGPP08493 103 aa7.76□□□□□ -1.17
APOBEC3D-201ENST00000216099 NMUP48645 174 aa7.76□□□□□ -1.17
APOBEC3D-201ENST00000216099 FXYD7P58549 80 aa7.76□□□□□ -1.17
APOBEC3D-201ENST00000216099 ORMDL2Q53FV1 153 aa7.76□□□□□ -1.17
APOBEC3D-201ENST00000216099 Q6ZVQ6 151 aa7.76□□□□□ -1.17
APOBEC3D-201ENST00000216099 PCP2Q8IVA1 136 aa7.76□□□□□ -1.17
APOBEC3D-201ENST00000216099 MYO9AB2RTY4 2548 aa7.75□□□□□ -1.17
APOBEC3D-201ENST00000216099 TLN2Q9Y4G6 2542 aa7.75□□□□□ -1.17
APOBEC3D-201ENST00000216099 TRAV12-2A0A075B6T6 113 aa7.75□□□□□ -1.17
APOBEC3D-201ENST00000216099 CD28P10747 220 aa7.75□□□□□ -1.17
APOBEC3D-201ENST00000216099 ETDBQ3ZM63 59 aa7.75□□□□□ -1.17
APOBEC3D-201ENST00000216099 LINC01006Q8NI28 216 aa7.75□□□□□ -1.17
APOBEC3D-201ENST00000216099 FAM218AQ96MZ4 157 aa7.75□□□□□ -1.17
APOBEC3D-201ENST00000216099 LINC00467Q9BRT7 94 aa7.75□□□□□ -1.17
APOBEC3D-201ENST00000216099 HELZ2Q9BYK8 2649 aaKnown RBP7.75□□□□□ -1.17
APOBEC3D-201ENST00000216099 KNCNA6PVL3 124 aa7.75□□□□□ -1.17
APOBEC3D-201ENST00000216099 FXYD2P54710 66 aa7.75□□□□□ -1.17
APOBEC3D-201ENST00000216099 SEC61BP60468 96 aaKnown RBP7.75□□□□□ -1.17
APOBEC3D-201ENST00000216099 HRCT1Q6UXD1 115 aa7.75□□□□□ -1.17
APOBEC3D-201ENST00000216099 SH2D6Q7Z4S9 175 aa7.75□□□□□ -1.17
APOBEC3D-201ENST00000216099 H7C1H1 209 aa7.74□□□□□ -1.17
APOBEC3D-201ENST00000216099 C18orf15Q96N68 181 aa7.74□□□□□ -1.17
APOBEC3D-201ENST00000216099 RBMY1BA6NDE4 496 aaKnown RBP7.74□□□□□ -1.17
APOBEC3D-201ENST00000216099 RBMY1EA6NEQ0 496 aaKnown RBP7.74□□□□□ -1.17
APOBEC3D-201ENST00000216099 K7ERJ3 54 aa7.74□□□□□ -1.17
APOBEC3D-201ENST00000216099 RBMY1DP0C7P1 496 aaKnown RBP7.74□□□□□ -1.17
APOBEC3D-201ENST00000216099 RPL39LQ96EH5 51 aaKnown RBP7.74□□□□□ -1.17
APOBEC3D-201ENST00000216099 MDFICQ9P1T7 246 aa7.74□□□□□ -1.17
APOBEC3D-201ENST00000216099 TRBV6-5A0A0K0K1A5 114 aa7.73□□□□□ -1.17
APOBEC3D-201ENST00000216099 LINC01549A6NIU2 74 aa7.73□□□□□ -1.17
APOBEC3D-201ENST00000216099 RPS28P62857 69 aaKnown RBP7.73□□□□□ -1.17
APOBEC3D-201ENST00000216099 PIK3CD-AS1Q5SR53 167 aa7.73□□□□□ -1.17
APOBEC3D-201ENST00000216099 SUMO4Q6EEV6 95 aa7.73□□□□□ -1.17
APOBEC3D-201ENST00000216099 PRADC1Q9BSG0 188 aa7.73□□□□□ -1.17
APOBEC3D-201ENST00000216099 UNC79Q9P2D8 2635 aa7.73□□□□□ -1.17
APOBEC3D-201ENST00000216099 CCDC168Q8NDH2 2452 aa7.73□□□□□ -1.17
APOBEC3D-201ENST00000216099 E9PLD3 99 aa7.73□□□□□ -1.17
APOBEC3D-201ENST00000216099 TOMM6Q96B49 74 aa7.73□□□□□ -1.17
APOBEC3D-201ENST00000216099 HIGD1BQ9P298 99 aa7.73□□□□□ -1.17
APOBEC3D-201ENST00000216099 TRBV20-1A0A075B6N2 111 aa7.72□□□□□ -1.17
APOBEC3D-201ENST00000216099 H3BMG7 143 aa7.72□□□□□ -1.17
APOBEC3D-201ENST00000216099 RBMY1A1P0DJD3 496 aaKnown RBP7.72□□□□□ -1.17
APOBEC3D-201ENST00000216099 CD164Q04900 197 aa7.72□□□□□ -1.17
APOBEC3D-201ENST00000216099 RBMY1FQ15415 496 aaKnown RBP7.72□□□□□ -1.17
APOBEC3D-201ENST00000216099 NHP2Q9NX24 153 aaKnown RBP7.72□□□□□ -1.17
APOBEC3D-201ENST00000216099 SONP18583 2426 aaKnown RBP7.72□□□□□ -1.17
APOBEC3D-201ENST00000216099 SORL1Q92673 2214 aa7.72□□□□□ -1.17
APOBEC3D-201ENST00000216099 ITPR2Q14571 2701 aa7.72□□□□□ -1.17
APOBEC3D-201ENST00000216099 C2orf48Q96LS8 159 aa7.72□□□□□ -1.17
APOBEC3D-201ENST00000216099 LINC01587Q99440 93 aa7.72□□□□□ -1.17
APOBEC3D-201ENST00000216099 TRAV12-1A0A0B4J245 112 aa7.71□□□□□ -1.18
APOBEC3D-201ENST00000216099 IGLL5B9A064 214 aa7.71□□□□□ -1.18
APOBEC3D-201ENST00000216099 PRSS1P07477 247 aa7.71□□□□□ -1.18
APOBEC3D-201ENST00000216099 POLR2KP53803 58 aaKnown RBP7.71□□□□□ -1.18
APOBEC3D-201ENST00000216099 CMC4P56277 68 aaPredicted RBP7.71□□□□□ -1.18
APOBEC3D-201ENST00000216099 CHAC1Q9BUX1 264 aa7.71□□□□□ -1.18
APOBEC3D-201ENST00000216099 JPT2Q9H910 190 aa7.71□□□□□ -1.18
APOBEC3D-201ENST00000216099 DKK2Q9UBU2 259 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms