RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 DPM2O94777 84 aa11.07□□□□□ -0.64
LAPTM4A-201ENST00000175091 RPL36AP83881 106 aaKnown RBP11.07□□□□□ -0.64
LAPTM4A-201ENST00000175091 Q8NAQ8 132 aa11.07□□□□□ -0.64
LAPTM4A-201ENST00000175091 ZNRF2Q8NHG8 242 aa11.07□□□□□ -0.64
LAPTM4A-201ENST00000175091 RPL36ALQ969Q0 106 aaKnown RBP11.07□□□□□ -0.64
LAPTM4A-201ENST00000175091 RNF183Q96D59 192 aa11.07□□□□□ -0.64
LAPTM4A-201ENST00000175091 IGHV4-28A0A0C4DH34 117 aa11.06□□□□□ -0.64
LAPTM4A-201ENST00000175091 LYRM9A8MSI8 78 aa11.06□□□□□ -0.64
LAPTM4A-201ENST00000175091 MIFP14174 115 aa11.06□□□□□ -0.64
LAPTM4A-201ENST00000175091 DEFA6Q01524 100 aa11.06□□□□□ -0.64
LAPTM4A-201ENST00000175091 FHL2Q14192 279 aa11.06□□□□□ -0.64
LAPTM4A-201ENST00000175091 ANKRD39Q53RE8 183 aa11.06□□□□□ -0.64
LAPTM4A-201ENST00000175091 PHLDA1Q8WV24 401 aaPredicted RBP11.06□□□□□ -0.64
LAPTM4A-201ENST00000175091 C14orf144Q96I85 54 aa11.06□□□□□ -0.64
LAPTM4A-201ENST00000175091 CHCHD7Q9BUK0 85 aa11.06□□□□□ -0.64
LAPTM4A-201ENST00000175091 IGHV3-38A0A0C4DH36 116 aa11.05□□□□□ -0.64
LAPTM4A-201ENST00000175091 G3V4G9 280 aa11.05□□□□□ -0.64
LAPTM4A-201ENST00000175091 DEFB130BP0DP73 79 aa11.05□□□□□ -0.64
LAPTM4A-201ENST00000175091 DEFB130AP0DP74 79 aa11.05□□□□□ -0.64
LAPTM4A-201ENST00000175091 UBE2D3P61077 147 aa11.05□□□□□ -0.64
LAPTM4A-201ENST00000175091 UBE2D2P62837 147 aa11.05□□□□□ -0.64
LAPTM4A-201ENST00000175091 COTL1Q14019 142 aa11.05□□□□□ -0.64
LAPTM4A-201ENST00000175091 HHLA3Q9XRX5 114 aa11.05□□□□□ -0.64
LAPTM4A-201ENST00000175091 TRGV4A0A0C4DH28 118 aa11.05□□□□□ -0.64
LAPTM4A-201ENST00000175091 PLNP26678 52 aa11.05□□□□□ -0.64
LAPTM4A-201ENST00000175091 SAMD5Q5TGI4 173 aa11.05□□□□□ -0.64
LAPTM4A-201ENST00000175091 FAM222AQ5U5X8 452 aa11.05□□□□□ -0.64
LAPTM4A-201ENST00000175091 CHTOPQ9Y3Y2 248 aaKnown RBP11.05□□□□□ -0.64
LAPTM4A-201ENST00000175091 PRSS29PA6NIE9 313 aa11.04□□□□□ -0.64
LAPTM4A-201ENST00000175091 DAZ4Q86SG3 579 aaKnown RBP11.04□□□□□ -0.64
LAPTM4A-201ENST00000175091 STPG4Q8N801 248 aa11.04□□□□□ -0.64
LAPTM4A-201ENST00000175091 DAZ3Q9NR90 486 aaKnown RBP11.04□□□□□ -0.64
LAPTM4A-201ENST00000175091 PMVKQ15126 192 aa11.03□□□□□ -0.64
LAPTM4A-201ENST00000175091 PYGO1Q9Y3Y4 419 aa11.03□□□□□ -0.64
LAPTM4A-201ENST00000175091 GAGE12JA6NER3 117 aa11.03□□□□□ -0.64
LAPTM4A-201ENST00000175091 GAGE1Q13065 139 aa11.03□□□□□ -0.64
LAPTM4A-201ENST00000175091 GAGE4Q13068 117 aa11.03□□□□□ -0.64
LAPTM4A-201ENST00000175091 GAGE5Q13069 117 aa11.03□□□□□ -0.64
LAPTM4A-201ENST00000175091 GAGE13Q4V321 117 aa11.03□□□□□ -0.64
LAPTM4A-201ENST00000175091 TP73-AS1Q9UF72 201 aa11.03□□□□□ -0.64
LAPTM4A-201ENST00000175091 IGLV4-3A0A075B6K6 122 aa11.02□□□□□ -0.65
LAPTM4A-201ENST00000175091 LINC00694P0DN24 101 aa11.02□□□□□ -0.65
LAPTM4A-201ENST00000175091 ZC2HC1BQ5TFG8 222 aa11.02□□□□□ -0.65
LAPTM4A-201ENST00000175091 CST9LQ9H4G1 147 aa11.02□□□□□ -0.65
LAPTM4A-201ENST00000175091 IGLV4-69A0A075B6H9 119 aa11.01□□□□□ -0.65
LAPTM4A-201ENST00000175091 LOC100131303A0A0U1RQF7 123 aa11.01□□□□□ -0.65
LAPTM4A-201ENST00000175091 DEFB4AO15263 64 aa11.01□□□□□ -0.65
LAPTM4A-201ENST00000175091 NPSP0C0P6 89 aa11.01□□□□□ -0.65
LAPTM4A-201ENST00000175091 COX8AP10176 69 aa11.01□□□□□ -0.65
LAPTM4A-201ENST00000175091 UBE2D4Q9Y2X8 147 aa11.01□□□□□ -0.65
LAPTM4A-201ENST00000175091 NOTCH1P46531 2555 aa11.01□□□□□ -0.65
LAPTM4A-201ENST00000175091 HNRNPA3P51991 378 aaKnown RBP11□□□□□ -0.65
LAPTM4A-201ENST00000175091 SLC25A34Q6PIV7 304 aa11□□□□□ -0.65
LAPTM4A-201ENST00000175091 FAM104AQ969W3 186 aa11□□□□□ -0.65
LAPTM4A-201ENST00000175091 OPRPNQ99935 248 aaPredicted RBP11□□□□□ -0.65
LAPTM4A-201ENST00000175091 PRADC1Q9BSG0 188 aa11□□□□□ -0.65
LAPTM4A-201ENST00000175091 NBEAL1Q6ZS30 2694 aa11□□□□□ -0.65
LAPTM4A-201ENST00000175091 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11□□□□□ -0.65
LAPTM4A-201ENST00000175091 IGKV2-29A2NJV5 120 aaPredicted RBP11□□□□□ -0.65
LAPTM4A-201ENST00000175091 FGF6P10767 208 aa11□□□□□ -0.65
LAPTM4A-201ENST00000175091 NTM-AS1Q6ZSK4 140 aa11□□□□□ -0.65
LAPTM4A-201ENST00000175091 SPANXA1Q9NS26 97 aa11□□□□□ -0.65
LAPTM4A-201ENST00000175091 CELA1Q9UNI1 258 aa11□□□□□ -0.65
LAPTM4A-201ENST00000175091 MRPL52Q86TS9 123 aaKnown RBP10.99□□□□□ -0.65
LAPTM4A-201ENST00000175091 CRYBA4P53673 196 aa10.98□□□□□ -0.65
LAPTM4A-201ENST00000175091 TCTAP57738 103 aa10.98□□□□□ -0.65
LAPTM4A-201ENST00000175091 PAPPA-AS1Q5QFB9 102 aa10.98□□□□□ -0.65
LAPTM4A-201ENST00000175091 GTSF1LQ9H1H1 148 aa10.98□□□□□ -0.65
LAPTM4A-201ENST00000175091 IGKV2D-26A0A0A0MRZ7 120 aa10.98□□□□□ -0.65
LAPTM4A-201ENST00000175091 CEMP1Q6PRD7 247 aaPredicted RBP10.98□□□□□ -0.65
LAPTM4A-201ENST00000175091 SBSPONQ8IVN8 264 aa10.98□□□□□ -0.65
LAPTM4A-201ENST00000175091 AMELXQ99217 191 aa10.98□□□□□ -0.65
LAPTM4A-201ENST00000175091 C11orf86A6NJI1 115 aa10.97□□□□□ -0.65
LAPTM4A-201ENST00000175091 EREGO14944 169 aa10.97□□□□□ -0.65
LAPTM4A-201ENST00000175091 NMUP48645 174 aa10.97□□□□□ -0.65
LAPTM4A-201ENST00000175091 DAD1P61803 113 aa10.97□□□□□ -0.65
LAPTM4A-201ENST00000175091 CTAG1AP78358 180 aa10.97□□□□□ -0.65
LAPTM4A-201ENST00000175091 BOD1L2Q8IYS8 172 aa10.97□□□□□ -0.65
LAPTM4A-201ENST00000175091 TIMM21Q9BVV7 248 aa10.97□□□□□ -0.65
LAPTM4A-201ENST00000175091 PRO0255Q9UI72 69 aa10.97□□□□□ -0.65
LAPTM4A-201ENST00000175091 MRPS16Q9Y3D3 137 aaKnown RBP10.97□□□□□ -0.65
LAPTM4A-201ENST00000175091 SPART-AS1P0CW21 52 aa10.95□□□□□ -0.66
LAPTM4A-201ENST00000175091 Q6ZUT4 128 aa10.95□□□□□ -0.66
LAPTM4A-201ENST00000175091 NFE4Q86UQ8 179 aa10.95□□□□□ -0.66
LAPTM4A-201ENST00000175091 MDFIQ99750 246 aa10.95□□□□□ -0.66
LAPTM4A-201ENST00000175091 SNHG12Q9BXW3 62 aa10.95□□□□□ -0.66
LAPTM4A-201ENST00000175091 VCX2Q9H322 139 aa10.95□□□□□ -0.66
LAPTM4A-201ENST00000175091 RETNQ9HD89 108 aa10.95□□□□□ -0.66
LAPTM4A-201ENST00000175091 DLEU1O43261 78 aa10.95□□□□□ -0.66
LAPTM4A-201ENST00000175091 MRPS36P82909 103 aaKnown RBP10.95□□□□□ -0.66
LAPTM4A-201ENST00000175091 PCP2Q8IVA1 136 aa10.95□□□□□ -0.66
LAPTM4A-201ENST00000175091 TEX48A0A1B0GUV7 120 aa10.94□□□□□ -0.66
LAPTM4A-201ENST00000175091 C2orf91Q6ZV80 131 aa10.94□□□□□ -0.66
LAPTM4A-201ENST00000175091 CHAC1Q9BUX1 264 aa10.94□□□□□ -0.66
LAPTM4A-201ENST00000175091 M0R143 59 aa10.93□□□□□ -0.66
LAPTM4A-201ENST00000175091 ATP5G1P05496 136 aa10.93□□□□□ -0.66
LAPTM4A-201ENST00000175091 GYPEP15421 78 aa10.93□□□□□ -0.66
LAPTM4A-201ENST00000175091 TENM3Q9P273 2699 aa10.93□□□□□ -0.66
LAPTM4A-201ENST00000175091 TRBV25-1A0A075B6N4 114 aa10.93□□□□□ -0.66
LAPTM4A-201ENST00000175091 RNASE13Q5GAN3 156 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms