RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 PSMG3Q9BT73 122 aaPredicted RBP5.42□□□□□ -1.54
LINC00339-212ENST00000642072 PLAC8Q9NZF1 115 aa5.42□□□□□ -1.54
LINC00339-212ENST00000642072 VAX2Q9UIW0 290 aa5.42□□□□□ -1.54
LINC00339-212ENST00000642072 PHLDA3Q9Y5J5 127 aa5.42□□□□□ -1.54
LINC00339-212ENST00000642072 PEX7O00628 323 aa5.41□□□□□ -1.54
LINC00339-212ENST00000642072 ATP6V0CP27449 155 aa5.41□□□□□ -1.54
LINC00339-212ENST00000642072 RAB4BP61018 213 aa5.41□□□□□ -1.54
LINC00339-212ENST00000642072 RBX1P62877 108 aa5.41□□□□□ -1.54
LINC00339-212ENST00000642072 ZNF726P1Q15940 193 aa5.41□□□□□ -1.54
LINC00339-212ENST00000642072 ZNF674Q2M3X9 581 aa5.41□□□□□ -1.54
LINC00339-212ENST00000642072 TMUB2Q71RG4 321 aa5.41□□□□□ -1.54
LINC00339-212ENST00000642072 SLC51BQ86UW2 128 aa5.41□□□□□ -1.54
LINC00339-212ENST00000642072 ZFP82Q8N141 532 aa5.41□□□□□ -1.54
LINC00339-212ENST00000642072 LINC00269Q8N2A0 174 aa5.41□□□□□ -1.54
LINC00339-212ENST00000642072 HSD17B11Q8NBQ5 300 aa5.41□□□□□ -1.54
LINC00339-212ENST00000642072 CLRN3Q8NCR9 226 aa5.41□□□□□ -1.54
LINC00339-212ENST00000642072 CHCHD5Q9BSY4 110 aa5.41□□□□□ -1.54
LINC00339-212ENST00000642072 PHOX2AO14813 284 aa5.4□□□□□ -1.54
LINC00339-212ENST00000642072 TPT1P13693 172 aaKnown RBP5.4□□□□□ -1.54
LINC00339-212ENST00000642072 KRTAP10-8P60410 259 aa5.4□□□□□ -1.54
LINC00339-212ENST00000642072 PKIAP61925 76 aa5.4□□□□□ -1.54
LINC00339-212ENST00000642072 SERF2P84101 59 aa5.4□□□□□ -1.54
LINC00339-212ENST00000642072 FAM162BQ5T6X4 162 aa5.4□□□□□ -1.54
LINC00339-212ENST00000642072 CLPSL2Q6UWE3 100 aa5.4□□□□□ -1.54
LINC00339-212ENST00000642072 COMMD7Q86VX2 200 aa5.4□□□□□ -1.54
LINC00339-212ENST00000642072 TNFSF18Q9UNG2 199 aa5.4□□□□□ -1.54
LINC00339-212ENST00000642072 ZFP30Q9Y2G7 519 aa5.4□□□□□ -1.54
LINC00339-212ENST00000642072 IGHV3-64A0A075B6Q5 118 aa5.39□□□□□ -1.55
LINC00339-212ENST00000642072 TMSB15BA0A087X1C1 80 aa5.39□□□□□ -1.55
LINC00339-212ENST00000642072 A0A0J9YXV3 536 aa5.39□□□□□ -1.55
LINC00339-212ENST00000642072 FAM74A7A6NL05 159 aa5.39□□□□□ -1.55
LINC00339-212ENST00000642072 LTAP01374 205 aa5.39□□□□□ -1.55
LINC00339-212ENST00000642072 MBP02144 154 aa5.39□□□□□ -1.55
LINC00339-212ENST00000642072 PRR3P79522 188 aaKnown RBP5.39□□□□□ -1.55
LINC00339-212ENST00000642072 KCNRGQ8N5I3 272 aa5.39□□□□□ -1.55
LINC00339-212ENST00000642072 OR10AG1Q8NH19 301 aa5.39□□□□□ -1.55
LINC00339-212ENST00000642072 HIST1H2BAQ96A08 127 aa5.39□□□□□ -1.55
LINC00339-212ENST00000642072 ACTR3CQ9C0K3 210 aaPredicted RBP5.39□□□□□ -1.55
LINC00339-212ENST00000642072 KIF25-AS1Q9Y6Z4 181 aa5.39□□□□□ -1.55
LINC00339-212ENST00000642072 IGLV10-54A0A075B6I4 117 aa5.38□□□□□ -1.55
LINC00339-212ENST00000642072 TRBV6-1A0A0K0K1D8 114 aa5.38□□□□□ -1.55
LINC00339-212ENST00000642072 hDV102S1A0JD36 115 aa5.38□□□□□ -1.55
LINC00339-212ENST00000642072 UBE2G2P60604 165 aa5.38□□□□□ -1.55
LINC00339-212ENST00000642072 REG3AQ06141 175 aa5.38□□□□□ -1.55
LINC00339-212ENST00000642072 GAGE6Q13070 117 aa5.38□□□□□ -1.55
LINC00339-212ENST00000642072 ZNF56Q15929 161 aa5.38□□□□□ -1.55
LINC00339-212ENST00000642072 IQCJQ1A5X6 159 aa5.38□□□□□ -1.55
LINC00339-212ENST00000642072 C20orf203Q8NBC4 194 aa5.38□□□□□ -1.55
LINC00339-212ENST00000642072 FMC1Q96HJ9 113 aa5.38□□□□□ -1.55
LINC00339-212ENST00000642072 AQP10Q96PS8 301 aa5.38□□□□□ -1.55
LINC00339-212ENST00000642072 SSBP4Q9BWG4 385 aaPredicted RBP5.38□□□□□ -1.55
LINC00339-212ENST00000642072 GFRA4Q9GZZ7 299 aa5.38□□□□□ -1.55
LINC00339-212ENST00000642072 FAT4Q6V0I7 4981 aa5.37□□□□□ -1.55
LINC00339-212ENST00000642072 FXYD6-FXYD2A0A087WZ82 144 aa5.37□□□□□ -1.55
LINC00339-212ENST00000642072 ARPC5O15511 151 aa5.37□□□□□ -1.55
LINC00339-212ENST00000642072 BCL2L11O43521 198 aa5.37□□□□□ -1.55
LINC00339-212ENST00000642072 SNAI2O43623 268 aa5.37□□□□□ -1.55
LINC00339-212ENST00000642072 GAS8-AS1O95177 125 aa5.37□□□□□ -1.55
LINC00339-212ENST00000642072 TMEM97Q5BJF2 176 aa5.37□□□□□ -1.55
LINC00339-212ENST00000642072 WDR73Q6P4I2 378 aa5.37□□□□□ -1.55
LINC00339-212ENST00000642072 DERL1Q9BUN8 251 aa5.37□□□□□ -1.55
LINC00339-212ENST00000642072 NKX6-2Q9C056 277 aaPredicted RBP5.37□□□□□ -1.55
LINC00339-212ENST00000642072 TRBV25-1A0A075B6N4 114 aa5.36□□□□□ -1.55
LINC00339-212ENST00000642072 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.36□□□□□ -1.55
LINC00339-212ENST00000642072 TRAV8-4A0A0B4J246 113 aa5.36□□□□□ -1.55
LINC00339-212ENST00000642072 MUC21A0A0G2JKD1 596 aa5.36□□□□□ -1.55
LINC00339-212ENST00000642072 CTXND1A0A1B0GTU2 59 aa5.36□□□□□ -1.55
LINC00339-212ENST00000642072 KANTRA0A1W2PQU2 76 aa5.36□□□□□ -1.55
LINC00339-212ENST00000642072 P01737 135 aa5.36□□□□□ -1.55
LINC00339-212ENST00000642072 CXCL1P09341 107 aa5.36□□□□□ -1.55
LINC00339-212ENST00000642072 C15orf56Q8N910 161 aa5.36□□□□□ -1.55
LINC00339-212ENST00000642072 STOML3Q8TAV4 291 aa5.36□□□□□ -1.55
LINC00339-212ENST00000642072 C7orf33Q8WU49 177 aa5.36□□□□□ -1.55
LINC00339-212ENST00000642072 IGLV4-60A0A075B6I1 120 aa5.35□□□□□ -1.55
LINC00339-212ENST00000642072 MUC21A0A140T8X8 626 aa5.35□□□□□ -1.55
LINC00339-212ENST00000642072 A0A1B0GUV1 79 aa5.35□□□□□ -1.55
LINC00339-212ENST00000642072 OR5AL1P0C617 328 aa5.35□□□□□ -1.55
LINC00339-212ENST00000642072 COX6A2Q02221 97 aa5.35□□□□□ -1.55
LINC00339-212ENST00000642072 UQCC3Q6UW78 93 aa5.35□□□□□ -1.55
LINC00339-212ENST00000642072 INO80EQ8NBZ0 244 aaPredicted RBP5.35□□□□□ -1.55
LINC00339-212ENST00000642072 DPH3Q96FX2 82 aa5.35□□□□□ -1.55
LINC00339-212ENST00000642072 TCEAL7Q9BRU2 100 aa5.35□□□□□ -1.55
LINC00339-212ENST00000642072 ZNF471Q9BX82 626 aaPredicted RBP5.35□□□□□ -1.55
LINC00339-212ENST00000642072 DPH3P1Q9H4G8 78 aa5.35□□□□□ -1.55
LINC00339-212ENST00000642072 IGHV1-24A0A0C4DH33 117 aa5.34□□□□□ -1.55
LINC00339-212ENST00000642072 RAB19A4D1S5 217 aa5.34□□□□□ -1.55
LINC00339-212ENST00000642072 M0QY20 66 aa5.34□□□□□ -1.55
LINC00339-212ENST00000642072 GZMBP10144 247 aa5.34□□□□□ -1.55
LINC00339-212ENST00000642072 FHITP49789 147 aa5.34□□□□□ -1.55
LINC00339-212ENST00000642072 UBE2G1P62253 170 aa5.34□□□□□ -1.55
LINC00339-212ENST00000642072 SRSF9Q13242 221 aaKnown RBP eCLIP5.34□□□□□ -1.55
LINC00339-212ENST00000642072 RPL7L1Q6DKI1 246 aaKnown RBP5.34□□□□□ -1.55
LINC00339-212ENST00000642072 SPINK6Q6UWN8 80 aa5.34□□□□□ -1.55
LINC00339-212ENST00000642072 ALKAL2Q6UX46 152 aa5.34□□□□□ -1.55
LINC00339-212ENST00000642072 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.34□□□□□ -1.55
LINC00339-212ENST00000642072 PRSS3P2Q8NHM4 247 aa5.34□□□□□ -1.55
LINC00339-212ENST00000642072 MLST8Q9BVC4 326 aa5.34□□□□□ -1.55
LINC00339-212ENST00000642072 AP5S1Q9NUS5 200 aa5.34□□□□□ -1.55
LINC00339-212ENST00000642072 LOC105371267A0A1B0GV96 52 aa5.33□□□□□ -1.56
LINC00339-212ENST00000642072 F5H697 171 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms