RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 TRBV6-5A0A0K0K1A5 114 aa12.54□□□□□ -0.4
PHGDH-232ENST00000641947 GAGE12BA1L429 117 aa12.54□□□□□ -0.4
PHGDH-232ENST00000641947 GAGE7O76087 117 aa12.54□□□□□ -0.4
PHGDH-232ENST00000641947 IGHV3-53P01767 116 aa12.54□□□□□ -0.4
PHGDH-232ENST00000641947 GAGE12FP0CL80 117 aa12.54□□□□□ -0.4
PHGDH-232ENST00000641947 GAGE12GP0CL81 117 aa12.54□□□□□ -0.4
PHGDH-232ENST00000641947 GAGE12IP0CL82 117 aa12.54□□□□□ -0.4
PHGDH-232ENST00000641947 KRTDAPP60985 99 aa12.54□□□□□ -0.4
PHGDH-232ENST00000641947 SPATA12Q7Z6I5 190 aa12.54□□□□□ -0.4
PHGDH-232ENST00000641947 DEFB104AQ8WTQ1 72 aa12.54□□□□□ -0.4
PHGDH-232ENST00000641947 ST20Q9HBF5 79 aa12.54□□□□□ -0.4
PHGDH-232ENST00000641947 A8MZ25 164 aa12.53□□□□□ -0.4
PHGDH-232ENST00000641947 RHODO00212 210 aa12.53□□□□□ -0.4
PHGDH-232ENST00000641947 LEPROTL1O95214 131 aa12.53□□□□□ -0.4
PHGDH-232ENST00000641947 PPP1R17O96001 155 aa12.53□□□□□ -0.4
PHGDH-232ENST00000641947 OR4C5Q8NGB2 326 aa12.53□□□□□ -0.4
PHGDH-232ENST00000641947 OR11H2Q8NH07 326 aa12.53□□□□□ -0.4
PHGDH-232ENST00000641947 TRAV4A0A0B4J268 109 aa12.53□□□□□ -0.4
PHGDH-232ENST00000641947 SDHAF1A6NFY7 115 aa12.53□□□□□ -0.4
PHGDH-232ENST00000641947 SMIM9A6NGZ8 99 aa12.53□□□□□ -0.4
PHGDH-232ENST00000641947 HBDP02042 147 aa12.53□□□□□ -0.4
PHGDH-232ENST00000641947 ZFP2Q6ZN57 461 aa12.53□□□□□ -0.4
PHGDH-232ENST00000641947 LURAP1LQ8IV03 231 aa12.53□□□□□ -0.4
PHGDH-232ENST00000641947 NIT2Q9NQR4 276 aa12.53□□□□□ -0.4
PHGDH-232ENST00000641947 RPL32P62910 135 aaKnown RBP12.52□□□□□ -0.41
PHGDH-232ENST00000641947 RNF183Q96D59 192 aa12.52□□□□□ -0.41
PHGDH-232ENST00000641947 TENM3Q9P273 2699 aa12.52□□□□□ -0.41
PHGDH-232ENST00000641947 DEFB4AO15263 64 aa12.51□□□□□ -0.41
PHGDH-232ENST00000641947 LAGE3Q14657 143 aa12.51□□□□□ -0.41
PHGDH-232ENST00000641947 IGHV4-28A0A0C4DH34 117 aa12.51□□□□□ -0.41
PHGDH-232ENST00000641947 PRB2P02812 416 aaPredicted RBP12.51□□□□□ -0.41
PHGDH-232ENST00000641947 FCER1GP30273 86 aa12.51□□□□□ -0.41
PHGDH-232ENST00000641947 LINC00612Q8N6U2 182 aa12.51□□□□□ -0.41
PHGDH-232ENST00000641947 Q8NAQ8 132 aa12.51□□□□□ -0.41
PHGDH-232ENST00000641947 TRBV27A0A0K0K1C4 114 aa12.5□□□□□ -0.41
PHGDH-232ENST00000641947 SCGB1D1O95968 90 aa12.5□□□□□ -0.41
PHGDH-232ENST00000641947 NEXN-AS1Q8NBZ9 246 aa12.5□□□□□ -0.41
PHGDH-232ENST00000641947 ZMAT5Q9UDW3 170 aaKnown RBP12.5□□□□□ -0.41
PHGDH-232ENST00000641947 TRGV2A0A075B6R0 118 aa12.49□□□□□ -0.41
PHGDH-232ENST00000641947 RETNQ9HD89 108 aa12.49□□□□□ -0.41
PHGDH-232ENST00000641947 H7C1H1 209 aa12.48□□□□□ -0.41
PHGDH-232ENST00000641947 BTF3P20290 206 aaKnown RBP12.48□□□□□ -0.41
PHGDH-232ENST00000641947 VCYO14598 125 aa12.47□□□□□ -0.41
PHGDH-232ENST00000641947 DEFB130BP0DP73 79 aa12.47□□□□□ -0.41
PHGDH-232ENST00000641947 DEFB130AP0DP74 79 aa12.47□□□□□ -0.41
PHGDH-232ENST00000641947 FAM222AQ5U5X8 452 aa12.47□□□□□ -0.41
PHGDH-232ENST00000641947 C18orf15Q96N68 181 aa12.47□□□□□ -0.41
PHGDH-232ENST00000641947 HSPB8Q9UJY1 196 aa12.47□□□□□ -0.41
PHGDH-232ENST00000641947 SYS1-DBNDD2H3BUS1 97 aa12.46□□□□□ -0.41
PHGDH-232ENST00000641947 NUDT3O95989 172 aa12.46□□□□□ -0.41
PHGDH-232ENST00000641947 TSHBP01222 138 aa12.46□□□□□ -0.41
PHGDH-232ENST00000641947 SLC25A29Q8N8R3 303 aa12.46□□□□□ -0.41
PHGDH-232ENST00000641947 CELA1Q9UNI1 258 aa12.46□□□□□ -0.41
PHGDH-232ENST00000641947 HUWE1Q7Z6Z7 4374 aaKnown RBP12.46□□□□□ -0.41
PHGDH-232ENST00000641947 MIFP14174 115 aa12.46□□□□□ -0.42
PHGDH-232ENST00000641947 ORMDL2Q53FV1 153 aa12.46□□□□□ -0.42
PHGDH-232ENST00000641947 K7EMI3 77 aa12.45□□□□□ -0.42
PHGDH-232ENST00000641947 K7EQD1 137 aa12.45□□□□□ -0.42
PHGDH-232ENST00000641947 FHL2Q14192 279 aa12.45□□□□□ -0.42
PHGDH-232ENST00000641947 KPRPQ5T749 579 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-232ENST00000641947 DKK2Q9UBU2 259 aa12.45□□□□□ -0.42
PHGDH-232ENST00000641947 H0Y8G0 127 aa12.44□□□□□ -0.42
PHGDH-232ENST00000641947 K7EIL1 84 aa12.44□□□□□ -0.42
PHGDH-232ENST00000641947 RIPPLY3P57055 190 aa12.44□□□□□ -0.42
PHGDH-232ENST00000641947 MAP1LC3CQ9BXW4 147 aa12.44□□□□□ -0.42
PHGDH-232ENST00000641947 TNFRSF18Q9Y5U5 241 aa12.44□□□□□ -0.42
PHGDH-232ENST00000641947 I3L3M4 83 aa12.43□□□□□ -0.42
PHGDH-232ENST00000641947 TOMM6Q96B49 74 aa12.43□□□□□ -0.42
PHGDH-232ENST00000641947 IFI27L1Q96BM0 104 aa12.43□□□□□ -0.42
PHGDH-232ENST00000641947 KIR2DL4Q99706 377 aa12.43□□□□□ -0.42
PHGDH-232ENST00000641947 LOC100131303A0A0U1RQF7 123 aa12.43□□□□□ -0.42
PHGDH-232ENST00000641947 LYRM9A8MSI8 78 aa12.43□□□□□ -0.42
PHGDH-232ENST00000641947 C2orf66Q6UXQ4 117 aa12.43□□□□□ -0.42
PHGDH-232ENST00000641947 TEX43Q6ZNM6 134 aa12.43□□□□□ -0.42
PHGDH-232ENST00000641947 DNAJC30Q96LL9 226 aa12.43□□□□□ -0.42
PHGDH-232ENST00000641947 IGHV3-38A0A0C4DH36 116 aa12.42□□□□□ -0.42
PHGDH-232ENST00000641947 RPL39P62891 51 aaKnown RBP12.42□□□□□ -0.42
PHGDH-232ENST00000641947 ATOH7Q8N100 152 aa12.41□□□□□ -0.42
PHGDH-232ENST00000641947 ZNRF2Q8NHG8 242 aa12.41□□□□□ -0.42
PHGDH-232ENST00000641947 PHLDA1Q8WV24 401 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-232ENST00000641947 PMCHL2Q9BQD1 86 aa12.41□□□□□ -0.42
PHGDH-232ENST00000641947 TP53TG1Q9Y2A0 90 aa12.41□□□□□ -0.42
PHGDH-232ENST00000641947 TRGV4A0A0C4DH28 118 aa12.41□□□□□ -0.42
PHGDH-232ENST00000641947 PET117Q6UWS5 81 aa12.41□□□□□ -0.42
PHGDH-232ENST00000641947 DNAH9Q9NYC9 4486 aa12.4□□□□□ -0.42
PHGDH-232ENST00000641947 TRBV10-1A0A0K0K1A3 114 aa12.4□□□□□ -0.42
PHGDH-232ENST00000641947 LINC01545Q5VT33 79 aa12.4□□□□□ -0.42
PHGDH-232ENST00000641947 TRBV7-3A0A075B6L6 115 aa12.39□□□□□ -0.43
PHGDH-232ENST00000641947 TRBV6-4A0A1B0GX49 114 aa12.39□□□□□ -0.43
PHGDH-232ENST00000641947 CIDEAO60543 219 aa12.39□□□□□ -0.43
PHGDH-232ENST00000641947 RHOHQ15669 191 aa12.39□□□□□ -0.43
PHGDH-232ENST00000641947 SBSPONQ8IVN8 264 aa12.39□□□□□ -0.43
PHGDH-232ENST00000641947 GAGE12JA6NER3 117 aa12.38□□□□□ -0.43
PHGDH-232ENST00000641947 UBE2D3P61077 147 aa12.38□□□□□ -0.43
PHGDH-232ENST00000641947 UBE2D2P62837 147 aa12.38□□□□□ -0.43
PHGDH-232ENST00000641947 GAGE1Q13065 139 aa12.38□□□□□ -0.43
PHGDH-232ENST00000641947 GAGE4Q13068 117 aa12.38□□□□□ -0.43
PHGDH-232ENST00000641947 GAGE5Q13069 117 aa12.38□□□□□ -0.43
PHGDH-232ENST00000641947 MAJINQ3KP22 176 aa12.38□□□□□ -0.43
PHGDH-232ENST00000641947 GAGE13Q4V321 117 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms