RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	ZNF702P	Q9H963	129 aa		12.42	□□□□□ -0.42
PHGDH-223	ENST00000641597	IGHV3-64	A0A075B6Q5	118 aa		12.41	□□□□□ -0.42
PHGDH-223	ENST00000641597	OR5A1	Q8NGJ0	315 aa		12.41	□□□□□ -0.42
PHGDH-223	ENST00000641597	IGHV1OR15-1	A0A075B7D0	117 aa		12.41	□□□□□ -0.42
PHGDH-223	ENST00000641597	VCY	O14598	125 aa		12.41	□□□□□ -0.42
PHGDH-223	ENST00000641597	TMEM170B	Q5T4T1	132 aa		12.41	□□□□□ -0.42
PHGDH-223	ENST00000641597	ZNF580	Q9UK33	172 aa		12.41	□□□□□ -0.42
PHGDH-223	ENST00000641597	C2CD3	Q4AC94	2353 aa		12.41	□□□□□ -0.42
PHGDH-223	ENST00000641597	FLNA	P21333	2647 aa	Known RBP	12.41	□□□□□ -0.42
PHGDH-223	ENST00000641597	ACAN	P16112	2415 aa		12.4	□□□□□ -0.42
PHGDH-223	ENST00000641597	VPREB3	Q9UKI3	123 aa		12.4	□□□□□ -0.42
PHGDH-223	ENST00000641597		G3V4G9	280 aa		12.4	□□□□□ -0.42
PHGDH-223	ENST00000641597	TCTEX1D4	Q5JR98	221 aa		12.4	□□□□□ -0.42
PHGDH-223	ENST00000641597	LGALS9	O00182	355 aa		12.39	□□□□□ -0.43
PHGDH-223	ENST00000641597	PMVK	Q15126	192 aa		12.39	□□□□□ -0.43
PHGDH-223	ENST00000641597	SVIP	Q8NHG7	77 aa		12.39	□□□□□ -0.43
PHGDH-223	ENST00000641597	TRBV27	A0A0K0K1C4	114 aa		12.39	□□□□□ -0.43
PHGDH-223	ENST00000641597	PPP1R17	O96001	155 aa		12.39	□□□□□ -0.43
PHGDH-223	ENST00000641597	SH2D6	Q7Z4S9	175 aa		12.39	□□□□□ -0.43
PHGDH-223	ENST00000641597	MTOR	P42345	2549 aa		12.39	□□□□□ -0.43
PHGDH-223	ENST00000641597	GATA3	P23771	443 aa		12.38	□□□□□ -0.43
PHGDH-223	ENST00000641597	FOXI2	Q6ZQN5	318 aa		12.38	□□□□□ -0.43
PHGDH-223	ENST00000641597	DEFB131A	P59861	70 aa		12.38	□□□□□ -0.43
PHGDH-223	ENST00000641597	SRSF9	Q13242	221 aa	Known RBP eCLIP	12.38	□□□□□ -0.43
PHGDH-223	ENST00000641597	CEMP1	Q6PRD7	247 aa	Predicted RBP	12.38	□□□□□ -0.43
PHGDH-223	ENST00000641597	RBMY1B	A6NDE4	496 aa	Known RBP	12.37	□□□□□ -0.43
PHGDH-223	ENST00000641597	RBMY1E	A6NEQ0	496 aa	Known RBP	12.37	□□□□□ -0.43
PHGDH-223	ENST00000641597	RBMY1D	P0C7P1	496 aa	Known RBP	12.37	□□□□□ -0.43
PHGDH-223	ENST00000641597	TAL2	Q16559	108 aa		12.37	□□□□□ -0.43
PHGDH-223	ENST00000641597	RRN3P1	Q2M238	152 aa		12.37	□□□□□ -0.43
PHGDH-223	ENST00000641597	SETX	Q7Z333	2677 aa	Known RBP	12.37	□□□□□ -0.43
PHGDH-223	ENST00000641597	RNASE13	Q5GAN3	156 aa	Known RBP	12.37	□□□□□ -0.43
PHGDH-223	ENST00000641597	PGPEP1	Q9NXJ5	209 aa		12.37	□□□□□ -0.43
PHGDH-223	ENST00000641597	APOM	O95445	188 aa		12.36	□□□□□ -0.43
PHGDH-223	ENST00000641597	KHDC1L	Q5JSQ8	128 aa		12.36	□□□□□ -0.43
PHGDH-223	ENST00000641597	IGHV4-31	P0DP07	118 aa		12.36	□□□□□ -0.43
PHGDH-223	ENST00000641597		Q6YL49	198 aa		12.36	□□□□□ -0.43
PHGDH-223	ENST00000641597	LINC01549	A6NIU2	74 aa		12.35	□□□□□ -0.43
PHGDH-223	ENST00000641597	ETDB	Q3ZM63	59 aa		12.35	□□□□□ -0.43
PHGDH-223	ENST00000641597		A0A0J9YY99	117 aa		12.34	□□□□□ -0.43
PHGDH-223	ENST00000641597	DSCR9	P59020	149 aa		12.34	□□□□□ -0.43
PHGDH-223	ENST00000641597	C11orf44	Q8N8P7	122 aa		12.34	□□□□□ -0.43
PHGDH-223	ENST00000641597	TENM4	Q6N022	2769 aa		12.34	□□□□□ -0.43
PHGDH-223	ENST00000641597	INSL3	P51460	131 aa		12.34	□□□□□ -0.43
PHGDH-223	ENST00000641597		Q6ZSN1	163 aa		12.34	□□□□□ -0.43
PHGDH-223	ENST00000641597	TMEM61	Q8N0U2	210 aa		12.34	□□□□□ -0.43
PHGDH-223	ENST00000641597	SYT8	Q8NBV8	401 aa		12.34	□□□□□ -0.43
PHGDH-223	ENST00000641597	UBE2E2	Q96LR5	201 aa		12.34	□□□□□ -0.43
PHGDH-223	ENST00000641597	MRPL16	Q9NX20	251 aa	Known RBP	12.34	□□□□□ -0.43
PHGDH-223	ENST00000641597	TRBV6-5	A0A0K0K1A5	114 aa		12.33	□□□□□ -0.43
PHGDH-223	ENST00000641597	RPL32	P62910	135 aa	Known RBP	12.33	□□□□□ -0.43
PHGDH-223	ENST00000641597		A0A1B0GWB2	263 aa		12.33	□□□□□ -0.44
PHGDH-223	ENST00000641597	ODF3	Q96PU9	254 aa		12.33	□□□□□ -0.44
PHGDH-223	ENST00000641597	AMELX	Q99217	191 aa		12.33	□□□□□ -0.44
PHGDH-223	ENST00000641597	TIMM17A	Q99595	171 aa		12.33	□□□□□ -0.44
PHGDH-223	ENST00000641597		A0A0J9YXV3	536 aa		12.32	□□□□□ -0.44
PHGDH-223	ENST00000641597	ADARB2-AS1	A8MUL3	147 aa		12.32	□□□□□ -0.44
PHGDH-223	ENST00000641597	ELANE	P08246	267 aa		12.32	□□□□□ -0.44
PHGDH-223	ENST00000641597	SPAG8	Q99932	426 aa	Predicted RBP	12.32	□□□□□ -0.44
PHGDH-223	ENST00000641597	SAMD13	Q5VXD3	122 aa		12.31	□□□□□ -0.44
PHGDH-223	ENST00000641597	TMEM141	Q96I45	108 aa		12.31	□□□□□ -0.44
PHGDH-223	ENST00000641597	SPANXB1	Q9NS25	103 aa	Predicted RBP	12.31	□□□□□ -0.44
PHGDH-223	ENST00000641597	FSHB	P01225	129 aa		12.31	□□□□□ -0.44
PHGDH-223	ENST00000641597	TRPT1	Q86TN4	253 aa	Known RBP	12.31	□□□□□ -0.44
PHGDH-223	ENST00000641597	C20orf203	Q8NBC4	194 aa		12.31	□□□□□ -0.44
PHGDH-223	ENST00000641597	LOC107984156	A0A0G2JMH3	177 aa		12.3	□□□□□ -0.44
PHGDH-223	ENST00000641597	TSPAN13	O95857	204 aa		12.3	□□□□□ -0.44
PHGDH-223	ENST00000641597	ARL17A	Q8IVW1	177 aa		12.3	□□□□□ -0.44
PHGDH-223	ENST00000641597	FAM104A	Q969W3	186 aa		12.3	□□□□□ -0.44
PHGDH-223	ENST00000641597		J3QQQ9	107 aa		12.3	□□□□□ -0.44
PHGDH-223	ENST00000641597		Q5PR19	223 aa		12.3	□□□□□ -0.44
PHGDH-223	ENST00000641597	DLX4	Q92988	240 aa	Predicted RBP	12.3	□□□□□ -0.44
PHGDH-223	ENST00000641597	PRO0461	Q9UI25	63 aa		12.3	□□□□□ -0.44
PHGDH-223	ENST00000641597	LINC01619	G3V211	115 aa		12.29	□□□□□ -0.44
PHGDH-223	ENST00000641597		H3BMM0	161 aa		12.29	□□□□□ -0.44
PHGDH-223	ENST00000641597		J3QLI3	93 aa		12.29	□□□□□ -0.44
PHGDH-223	ENST00000641597	UBE2D1	P51668	147 aa		12.29	□□□□□ -0.44
PHGDH-223	ENST00000641597	IGHV3-38	A0A0C4DH36	116 aa		12.29	□□□□□ -0.44
PHGDH-223	ENST00000641597	TMEM89	A2RUT3	159 aa		12.29	□□□□□ -0.44
PHGDH-223	ENST00000641597	HERVK_113	P61574	105 aa		12.29	□□□□□ -0.44
PHGDH-223	ENST00000641597	IGLV4-3	A0A075B6K6	122 aa		12.28	□□□□□ -0.44
PHGDH-223	ENST00000641597		I3L3M4	83 aa		12.28	□□□□□ -0.44
PHGDH-223	ENST00000641597	NSUN5P1	Q3KNT7	163 aa		12.28	□□□□□ -0.44
PHGDH-223	ENST00000641597	ITPR2	Q14571	2701 aa		12.28	□□□□□ -0.44
PHGDH-223	ENST00000641597	IGHV3-30	P01768	117 aa		12.28	□□□□□ -0.44
PHGDH-223	ENST00000641597	IGHV3-30-5	P0DP03	117 aa		12.28	□□□□□ -0.44
PHGDH-223	ENST00000641597	GAGE13	Q4V321	117 aa		12.28	□□□□□ -0.44
PHGDH-223	ENST00000641597		Q96MF0	132 aa		12.28	□□□□□ -0.44
PHGDH-223	ENST00000641597		A8MZ25	164 aa		12.27	□□□□□ -0.44
PHGDH-223	ENST00000641597	ZNF22	P17026	224 aa	Predicted RBP	12.27	□□□□□ -0.44
PHGDH-223	ENST00000641597	COTL1	Q14019	142 aa		12.27	□□□□□ -0.44
PHGDH-223	ENST00000641597	EIF4EBP3	O60516	100 aa	Predicted RBP	12.27	□□□□□ -0.45
PHGDH-223	ENST00000641597	CD28	P10747	220 aa		12.27	□□□□□ -0.45
PHGDH-223	ENST00000641597		A0A1W2PRX2	142 aa		12.26	□□□□□ -0.45
PHGDH-223	ENST00000641597	CFC1B	P0CG36	223 aa		12.26	□□□□□ -0.45
PHGDH-223	ENST00000641597	CFC1	P0CG37	223 aa		12.26	□□□□□ -0.45
PHGDH-223	ENST00000641597	PSMB2	P49721	201 aa		12.26	□□□□□ -0.45
PHGDH-223	ENST00000641597	SMCP	P49901	116 aa	Predicted RBP	12.26	□□□□□ -0.45
PHGDH-223	ENST00000641597	NDUFA11	Q86Y39	141 aa		12.26	□□□□□ -0.45
PHGDH-223	ENST00000641597	PTH2	Q96A98	100 aa		12.26	□□□□□ -0.45

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