RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 TENM1Q9UKZ4 2725 aa11.08□□□□□ -0.64
TRIM3-215ENST00000639856 VCYO14598 125 aa11.08□□□□□ -0.64
TRIM3-215ENST00000639856 CRLF1O75462 422 aa11.08□□□□□ -0.64
TRIM3-215ENST00000639856 MAP6D1Q9H9H5 199 aa11.08□□□□□ -0.64
TRIM3-215ENST00000639856 ZNF256Q9Y2P7 627 aaPredicted RBP11.08□□□□□ -0.64
TRIM3-215ENST00000639856 SDHAF1A6NFY7 115 aa11.07□□□□□ -0.64
TRIM3-215ENST00000639856 CBY3A6NI87 242 aa11.07□□□□□ -0.64
TRIM3-215ENST00000639856 LINC01549A6NIU2 74 aa11.07□□□□□ -0.64
TRIM3-215ENST00000639856 ZNF876PQ49A33 203 aa11.07□□□□□ -0.64
TRIM3-215ENST00000639856 BAALCQ8WXS3 180 aa11.07□□□□□ -0.64
TRIM3-215ENST00000639856 KIR2DL4Q99706 377 aa11.07□□□□□ -0.64
TRIM3-215ENST00000639856 CYSLTR1Q9Y271 337 aa11.07□□□□□ -0.64
TRIM3-215ENST00000639856 CHTOPQ9Y3Y2 248 aaKnown RBP11.07□□□□□ -0.64
TRIM3-215ENST00000639856 TRBV27A0A0K0K1C4 114 aa11.06□□□□□ -0.64
TRIM3-215ENST00000639856 UBE2V1Q13404 147 aa11.06□□□□□ -0.64
TRIM3-215ENST00000639856 ZNF56Q15929 161 aa11.06□□□□□ -0.64
TRIM3-215ENST00000639856 ZFP2Q6ZN57 461 aa11.06□□□□□ -0.64
TRIM3-215ENST00000639856 TTTY13Q9BZ97 58 aa11.06□□□□□ -0.64
TRIM3-215ENST00000639856 HIGD1BQ9P298 99 aa11.06□□□□□ -0.64
TRIM3-215ENST00000639856 RBMY1BA6NDE4 496 aaKnown RBP11.06□□□□□ -0.64
TRIM3-215ENST00000639856 RBMY1EA6NEQ0 496 aaKnown RBP11.06□□□□□ -0.64
TRIM3-215ENST00000639856 M0QY20 66 aa11.06□□□□□ -0.64
TRIM3-215ENST00000639856 RBMY1DP0C7P1 496 aaKnown RBP11.06□□□□□ -0.64
TRIM3-215ENST00000639856 PTTG1IPP53801 180 aa11.06□□□□□ -0.64
TRIM3-215ENST00000639856 SPAG8Q99932 426 aaPredicted RBP11.06□□□□□ -0.64
TRIM3-215ENST00000639856 BAHCC1Q9P281 2608 aa11.05□□□□□ -0.64
TRIM3-215ENST00000639856 CCL25O15444 150 aa11.05□□□□□ -0.64
TRIM3-215ENST00000639856 MORN3Q6PF18 240 aaPredicted RBP11.05□□□□□ -0.64
TRIM3-215ENST00000639856 RNASE8Q8TDE3 154 aaKnown RBP11.05□□□□□ -0.64
TRIM3-215ENST00000639856 A6NDN8 102 aa11.04□□□□□ -0.64
TRIM3-215ENST00000639856 SAP30O75446 220 aa11.04□□□□□ -0.64
TRIM3-215ENST00000639856 ODF3L2Q3SX64 289 aa11.04□□□□□ -0.64
TRIM3-215ENST00000639856 TP53TG1Q9Y2A0 90 aa11.04□□□□□ -0.64
TRIM3-215ENST00000639856 TRBV25-1A0A075B6N4 114 aa11.03□□□□□ -0.64
TRIM3-215ENST00000639856 PRSS29PA6NIE9 313 aa11.03□□□□□ -0.64
TRIM3-215ENST00000639856 VAMP3Q15836 100 aa11.03□□□□□ -0.64
TRIM3-215ENST00000639856 TRPT1Q86TN4 253 aaKnown RBP11.03□□□□□ -0.64
TRIM3-215ENST00000639856 ATRQ13535 2644 aa11.03□□□□□ -0.64
TRIM3-215ENST00000639856 VWFP04275 2813 aa11.03□□□□□ -0.64
TRIM3-215ENST00000639856 TRAV25A0A0B4J276 109 aa11.03□□□□□ -0.64
TRIM3-215ENST00000639856 IGIPA6NJ69 53 aa11.03□□□□□ -0.64
TRIM3-215ENST00000639856 HTN1P15515 57 aa11.03□□□□□ -0.64
TRIM3-215ENST00000639856 RIPPLY3P57055 190 aa11.03□□□□□ -0.64
TRIM3-215ENST00000639856 RBX1P62877 108 aa11.03□□□□□ -0.64
TRIM3-215ENST00000639856 NDUFA11Q86Y39 141 aa11.02□□□□□ -0.64
TRIM3-215ENST00000639856 DEFB104AQ8WTQ1 72 aa11.02□□□□□ -0.64
TRIM3-215ENST00000639856 TEP1Q99973 2627 aaKnown RBP11.02□□□□□ -0.65
TRIM3-215ENST00000639856 TRAV8-6A0A0B4J262 113 aa11.02□□□□□ -0.65
TRIM3-215ENST00000639856 TSHBP01222 138 aa11.02□□□□□ -0.65
TRIM3-215ENST00000639856 CHAC1Q9BUX1 264 aa11.02□□□□□ -0.65
TRIM3-215ENST00000639856 RPL39P62891 51 aaKnown RBP11.01□□□□□ -0.65
TRIM3-215ENST00000639856 MAPKAPK5-AS1Q8N8E1 139 aa11.01□□□□□ -0.65
TRIM3-215ENST00000639856 TMEM141Q96I45 108 aa11.01□□□□□ -0.65
TRIM3-215ENST00000639856 TIMM17AQ99595 171 aa11.01□□□□□ -0.65
TRIM3-215ENST00000639856 H3BRM9 83 aa11□□□□□ -0.65
TRIM3-215ENST00000639856 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11□□□□□ -0.65
TRIM3-215ENST00000639856 ZNF415Q09FC8 603 aa10.99□□□□□ -0.65
TRIM3-215ENST00000639856 PMVKQ15126 192 aa10.99□□□□□ -0.65
TRIM3-215ENST00000639856 RHOHQ15669 191 aa10.99□□□□□ -0.65
TRIM3-215ENST00000639856 PIK3CD-AS1Q5SR53 167 aa10.99□□□□□ -0.65
TRIM3-215ENST00000639856 CLUHP3Q96NS8 147 aa10.99□□□□□ -0.65
TRIM3-215ENST00000639856 EDA2RQ9HAV5 297 aa10.99□□□□□ -0.65
TRIM3-215ENST00000639856 NOTCH3Q9UM47 2321 aa10.99□□□□□ -0.65
TRIM3-215ENST00000639856 OR11H12B2RN74 326 aa10.99□□□□□ -0.65
TRIM3-215ENST00000639856 M0R2P5 195 aa10.99□□□□□ -0.65
TRIM3-215ENST00000639856 IGLV1-51P01701 117 aa10.99□□□□□ -0.65
TRIM3-215ENST00000639856 PRM2P04554 102 aa10.99□□□□□ -0.65
TRIM3-215ENST00000639856 AMMECR1LQ6DCA0 310 aa10.99□□□□□ -0.65
TRIM3-215ENST00000639856 OR11H2Q8NH07 326 aa10.99□□□□□ -0.65
TRIM3-215ENST00000639856 LINC00467Q9BRT7 94 aa10.99□□□□□ -0.65
TRIM3-215ENST00000639856 E9PLD3 99 aa10.98□□□□□ -0.65
TRIM3-215ENST00000639856 PF4P02776 101 aa10.98□□□□□ -0.65
TRIM3-215ENST00000639856 GCSHP23434 173 aa10.98□□□□□ -0.65
TRIM3-215ENST00000639856 NACAE9PAV3 2078 aa10.98□□□□□ -0.65
TRIM3-215ENST00000639856 A8MWV9 139 aa10.97□□□□□ -0.65
TRIM3-215ENST00000639856 I3L3M4 83 aa10.97□□□□□ -0.65
TRIM3-215ENST00000639856 PAPPA-AS1Q5QFB9 102 aa10.97□□□□□ -0.65
TRIM3-215ENST00000639856 PTH2Q96A98 100 aa10.97□□□□□ -0.65
TRIM3-215ENST00000639856 CST9LQ9H4G1 147 aa10.97□□□□□ -0.65
TRIM3-215ENST00000639856 IGLV4-69A0A075B6H9 119 aa10.97□□□□□ -0.65
TRIM3-215ENST00000639856 C9orf118A6NHY6 69 aa10.97□□□□□ -0.65
TRIM3-215ENST00000639856 CYSRT1A8MQ03 144 aa10.97□□□□□ -0.65
TRIM3-215ENST00000639856 INSP01308 110 aa10.97□□□□□ -0.65
TRIM3-215ENST00000639856 LINC00482Q8N8I6 264 aa10.97□□□□□ -0.65
TRIM3-215ENST00000639856 OR4C5Q8NGB2 326 aa10.97□□□□□ -0.65
TRIM3-215ENST00000639856 SPATA3Q8NHX4 192 aa10.97□□□□□ -0.65
TRIM3-215ENST00000639856 LINC01587Q99440 93 aa10.97□□□□□ -0.65
TRIM3-215ENST00000639856 WFDC10AQ9H1F0 79 aa10.97□□□□□ -0.65
TRIM3-215ENST00000639856 P0DMU3 169 aa10.96□□□□□ -0.65
TRIM3-215ENST00000639856 FAM231AP0DMU4 169 aa10.96□□□□□ -0.65
TRIM3-215ENST00000639856 FAM231CP0DMU5 169 aa10.96□□□□□ -0.65
TRIM3-215ENST00000639856 FXYD2P54710 66 aa10.96□□□□□ -0.65
TRIM3-215ENST00000639856 UFSP1Q6NVU6 142 aa10.96□□□□□ -0.65
TRIM3-215ENST00000639856 C11orf72Q8NBR9 251 aa10.96□□□□□ -0.65
TRIM3-215ENST00000639856 TM2D2Q9BX73 214 aa10.96□□□□□ -0.65
TRIM3-215ENST00000639856 MYMXA0A1B0GTQ4 84 aa10.96□□□□□ -0.66
TRIM3-215ENST00000639856 C11orf86A6NJI1 115 aa10.96□□□□□ -0.66
TRIM3-215ENST00000639856 CEND1Q8N111 149 aa10.96□□□□□ -0.66
TRIM3-215ENST00000639856 PRADC1Q9BSG0 188 aa10.96□□□□□ -0.66
TRIM3-215ENST00000639856 IGHV3-73A0A0B4J1V6 119 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms