RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 GHRHP01286 108 aa12.66□□□□□ -0.38
SCARB2-210ENST00000638567 ZFAND3Q9H8U3 227 aa12.66□□□□□ -0.38
SCARB2-210ENST00000638567 GPHB5Q86YW7 130 aa12.65□□□□□ -0.38
SCARB2-210ENST00000638567 ANKRD29Q8N6D5 301 aa12.65□□□□□ -0.38
SCARB2-210ENST00000638567 C15orf53Q8NAA6 179 aa12.65□□□□□ -0.38
SCARB2-210ENST00000638567 NOP10Q9NPE3 64 aaKnown RBP12.65□□□□□ -0.38
SCARB2-210ENST00000638567 PTH2Q96A98 100 aa12.65□□□□□ -0.38
SCARB2-210ENST00000638567 RNF185Q96GF1 192 aa12.65□□□□□ -0.38
SCARB2-210ENST00000638567 URB1-AS1Q96HZ7 61 aa12.64□□□□□ -0.39
SCARB2-210ENST00000638567 COL5A1P20908 1838 aaPredicted RBP12.64□□□□□ -0.39
SCARB2-210ENST00000638567 EXPH5Q8NEV8 1989 aa12.64□□□□□ -0.39
SCARB2-210ENST00000638567 EDA2RQ9HAV5 297 aa12.64□□□□□ -0.39
SCARB2-210ENST00000638567 EBI3Q14213 229 aa12.63□□□□□ -0.39
SCARB2-210ENST00000638567 C2orf91Q6ZV80 131 aa12.63□□□□□ -0.39
SCARB2-210ENST00000638567 FSTL3O95633 263 aa12.63□□□□□ -0.39
SCARB2-210ENST00000638567 DAND5Q8N907 189 aa12.63□□□□□ -0.39
SCARB2-210ENST00000638567 U3KQK5 164 aa12.63□□□□□ -0.39
SCARB2-210ENST00000638567 IFITM1P13164 125 aa12.63□□□□□ -0.39
SCARB2-210ENST00000638567 FOXI1Q12951 378 aa12.63□□□□□ -0.39
SCARB2-210ENST00000638567 A0A0J9YX75 114 aa12.62□□□□□ -0.39
SCARB2-210ENST00000638567 MAPKAPK5-AS1Q8N8E1 139 aa12.62□□□□□ -0.39
SCARB2-210ENST00000638567 C20orf203Q8NBC4 194 aa12.62□□□□□ -0.39
SCARB2-210ENST00000638567 DNAJC30Q96LL9 226 aa12.62□□□□□ -0.39
SCARB2-210ENST00000638567 RBX1P62877 108 aa12.62□□□□□ -0.39
SCARB2-210ENST00000638567 C20orf173Q96LM9 149 aa12.62□□□□□ -0.39
SCARB2-210ENST00000638567 A0A096LPF7 62 aa12.61□□□□□ -0.39
SCARB2-210ENST00000638567 GAS8-AS1O95177 125 aa12.61□□□□□ -0.39
SCARB2-210ENST00000638567 LINC01620Q4KN68 170 aa12.61□□□□□ -0.39
SCARB2-210ENST00000638567 PRSS47A8MTI9 375 aa12.61□□□□□ -0.39
SCARB2-210ENST00000638567 A6NDX4 124 aa12.61□□□□□ -0.39
SCARB2-210ENST00000638567 TM2D2Q9BX73 214 aa12.61□□□□□ -0.39
SCARB2-210ENST00000638567 DPH3Q96FX2 82 aa12.61□□□□□ -0.39
SCARB2-210ENST00000638567 SPAG8Q99932 426 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-210ENST00000638567 CLPSL2Q6UWE3 100 aa12.6□□□□□ -0.39
SCARB2-210ENST00000638567 ZFYVE26Q68DK2 2539 aa12.6□□□□□ -0.39
SCARB2-210ENST00000638567 SOCS3O14543 225 aa12.6□□□□□ -0.39
SCARB2-210ENST00000638567 ZFAND2AQ8N6M9 145 aa12.6□□□□□ -0.39
SCARB2-210ENST00000638567 TRAV13-2A0A0B4J235 113 aa12.59□□□□□ -0.39
SCARB2-210ENST00000638567 C9orf153Q5TBE3 101 aa12.59□□□□□ -0.39
SCARB2-210ENST00000638567 CEMP1Q6PRD7 247 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-210ENST00000638567 C11orf21Q9P2W6 132 aa12.59□□□□□ -0.39
SCARB2-210ENST00000638567 CCL24O00175 119 aa12.59□□□□□ -0.39
SCARB2-210ENST00000638567 Q71RC1 249 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-210ENST00000638567 NDUFA11Q86Y39 141 aa12.59□□□□□ -0.39
SCARB2-210ENST00000638567 NEXN-AS1Q8NBZ9 246 aa12.59□□□□□ -0.39
SCARB2-210ENST00000638567 F5H768 121 aa12.58□□□□□ -0.4
SCARB2-210ENST00000638567 C5orf38Q86SI9 138 aa12.58□□□□□ -0.4
SCARB2-210ENST00000638567 TMEM61Q8N0U2 210 aa12.58□□□□□ -0.4
SCARB2-210ENST00000638567 ICOSQ9Y6W8 199 aa12.58□□□□□ -0.4
SCARB2-210ENST00000638567 SLC25A29Q8N8R3 303 aa12.57□□□□□ -0.4
SCARB2-210ENST00000638567 C19orf84I3L1E1 186 aa12.57□□□□□ -0.4
SCARB2-210ENST00000638567 TNFRSF13BO14836 293 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-210ENST00000638567 IGHV3-30-3P0DP02 117 aa12.57□□□□□ -0.4
SCARB2-210ENST00000638567 ABCA12Q86UK0 2595 aa12.56□□□□□ -0.4
SCARB2-210ENST00000638567 BAALC-AS2P0C853 105 aa12.56□□□□□ -0.4
SCARB2-210ENST00000638567 XCL1P47992 114 aa12.56□□□□□ -0.4
SCARB2-210ENST00000638567 DAD1P61803 113 aa12.56□□□□□ -0.4
SCARB2-210ENST00000638567 PIFOQ8TCI5 191 aa12.56□□□□□ -0.4
SCARB2-210ENST00000638567 B5MCH6 92 aa12.56□□□□□ -0.4
SCARB2-210ENST00000638567 RS1O15537 224 aa12.56□□□□□ -0.4
SCARB2-210ENST00000638567 P0DMU3 169 aa12.56□□□□□ -0.4
SCARB2-210ENST00000638567 FAM231AP0DMU4 169 aa12.56□□□□□ -0.4
SCARB2-210ENST00000638567 FAM231CP0DMU5 169 aa12.56□□□□□ -0.4
SCARB2-210ENST00000638567 CHD9Q3L8U1 2897 aa12.55□□□□□ -0.4
SCARB2-210ENST00000638567 Q8N6K4 173 aa12.55□□□□□ -0.4
SCARB2-210ENST00000638567 IGHG4P01861 327 aa12.55□□□□□ -0.4
SCARB2-210ENST00000638567 C11orf71Q6IPW1 123 aa12.55□□□□□ -0.4
SCARB2-210ENST00000638567 RNF152Q8N8N0 203 aa12.55□□□□□ -0.4
SCARB2-210ENST00000638567 LRRK2Q5S007 2527 aa12.54□□□□□ -0.4
SCARB2-210ENST00000638567 TINCRA0A1B0GVN0 87 aa12.54□□□□□ -0.4
SCARB2-210ENST00000638567 TCL1BO95988 128 aa12.54□□□□□ -0.4
SCARB2-210ENST00000638567 JMJD1CQ15652 2540 aa12.54□□□□□ -0.4
SCARB2-210ENST00000638567 ANGP03950 147 aaKnown RBP12.54□□□□□ -0.4
SCARB2-210ENST00000638567 NRACQ8N912 160 aa12.54□□□□□ -0.4
SCARB2-210ENST00000638567 BPTFQ12830 3046 aa12.53□□□□□ -0.4
SCARB2-210ENST00000638567 A0A0C4DFX4 3053 aa12.53□□□□□ -0.4
SCARB2-210ENST00000638567 PRR9Q5T870 116 aa12.53□□□□□ -0.4
SCARB2-210ENST00000638567 IGHV1-58A0A0C4DH39 117 aa12.53□□□□□ -0.4
SCARB2-210ENST00000638567 CRYBA4P53673 196 aa12.53□□□□□ -0.4
SCARB2-210ENST00000638567 VSIG2Q96IQ7 327 aa12.53□□□□□ -0.4
SCARB2-210ENST00000638567 PRB1P04280 392 aa12.53□□□□□ -0.4
SCARB2-210ENST00000638567 TRBV7-3A0A075B6L6 115 aa12.52□□□□□ -0.4
SCARB2-210ENST00000638567 HERV-K104P63124 156 aa12.52□□□□□ -0.4
SCARB2-210ENST00000638567 CLEC2BQ92478 149 aa12.52□□□□□ -0.4
SCARB2-210ENST00000638567 K7EQD1 137 aa12.52□□□□□ -0.41
SCARB2-210ENST00000638567 TNRC6BQ9UPQ9 1833 aaKnown RBP12.52□□□□□ -0.41
SCARB2-210ENST00000638567 MRPS12O15235 138 aaKnown RBP12.52□□□□□ -0.41
SCARB2-210ENST00000638567 Q6ZQT7 251 aa12.51□□□□□ -0.41
SCARB2-210ENST00000638567 SND1-IT1Q9HBX3 110 aa12.51□□□□□ -0.41
SCARB2-210ENST00000638567 SPANXB1Q9NS25 103 aaPredicted RBP12.51□□□□□ -0.41
SCARB2-210ENST00000638567 Q6ZUT4 128 aa12.51□□□□□ -0.41
SCARB2-210ENST00000638567 A0A0J9YY99 117 aa12.51□□□□□ -0.41
SCARB2-210ENST00000638567 TMEM89A2RUT3 159 aa12.51□□□□□ -0.41
SCARB2-210ENST00000638567 K7EQG2 157 aa12.51□□□□□ -0.41
SCARB2-210ENST00000638567 CDSNQ15517 529 aa12.5□□□□□ -0.41
SCARB2-210ENST00000638567 DAZ2Q13117 558 aaKnown RBP12.5□□□□□ -0.41
SCARB2-210ENST00000638567 DEFB113Q30KQ7 82 aa12.5□□□□□ -0.41
SCARB2-210ENST00000638567 DAZ4Q86SG3 579 aaKnown RBP12.5□□□□□ -0.41
SCARB2-210ENST00000638567 DAZ3Q9NR90 486 aaKnown RBP12.5□□□□□ -0.41
SCARB2-210ENST00000638567 TRBV10-2A0A0K0K1G8 114 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms