RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 SDHAF1A6NFY7 115 aa9.13□□□□□ -0.95
GFAP-228ENST00000638488 ZNF256Q9Y2P7 627 aaPredicted RBP9.13□□□□□ -0.95
GFAP-228ENST00000638488 LST1O00453 97 aa9.13□□□□□ -0.95
GFAP-228ENST00000638488 IGHV3-23P01764 117 aa9.13□□□□□ -0.95
GFAP-228ENST00000638488 ZNF22P17026 224 aaPredicted RBP9.13□□□□□ -0.95
GFAP-228ENST00000638488 ZNF876PQ49A33 203 aa9.13□□□□□ -0.95
GFAP-228ENST00000638488 BEX4Q9NWD9 120 aaPredicted RBP9.13□□□□□ -0.95
GFAP-228ENST00000638488 KLK5Q9Y337 293 aaPredicted RBP9.13□□□□□ -0.95
GFAP-228ENST00000638488 IGFL4Q6B9Z1 124 aa9.12□□□□□ -0.95
GFAP-228ENST00000638488 RPL39LQ96EH5 51 aaKnown RBP9.12□□□□□ -0.95
GFAP-228ENST00000638488 PRAC2D3DTV9 90 aa9.12□□□□□ -0.95
GFAP-228ENST00000638488 SDIM1Q6ZPB5 146 aa9.12□□□□□ -0.95
GFAP-228ENST00000638488 VPS13CQ709C8 3753 aa9.12□□□□□ -0.95
GFAP-228ENST00000638488 NDPQ00604 133 aa9.11□□□□□ -0.95
GFAP-228ENST00000638488 C5orf38Q86SI9 138 aa9.11□□□□□ -0.95
GFAP-228ENST00000638488 TP53TG1Q9Y2A0 90 aa9.11□□□□□ -0.95
GFAP-228ENST00000638488 PIEZO1Q92508 2521 aa9.11□□□□□ -0.95
GFAP-228ENST00000638488 ZFHX3Q15911 3703 aa9.11□□□□□ -0.95
GFAP-228ENST00000638488 C2orf48Q96LS8 159 aa9.11□□□□□ -0.95
GFAP-228ENST00000638488 IGHV3OR16-10A0A075B7F0 116 aa9.1□□□□□ -0.95
GFAP-228ENST00000638488 OVOL1O14753 267 aa9.1□□□□□ -0.95
GFAP-228ENST00000638488 TMEM258P61165 79 aa9.1□□□□□ -0.95
GFAP-228ENST00000638488 NPBQ8NG41 125 aa9.1□□□□□ -0.95
GFAP-228ENST00000638488 MRAPQ8TCY5 172 aa9.1□□□□□ -0.95
GFAP-228ENST00000638488 AGPAT4-IT1Q9H0P7 198 aa9.1□□□□□ -0.95
GFAP-228ENST00000638488 F8W735 103 aaPredicted RBP9.1□□□□□ -0.95
GFAP-228ENST00000638488 ATOX1O00244 68 aa9.1□□□□□ -0.95
GFAP-228ENST00000638488 MRPL53Q96EL3 112 aaKnown RBP9.1□□□□□ -0.95
GFAP-228ENST00000638488 IGLV11-55A0A075B6I3 123 aa9.09□□□□□ -0.95
GFAP-228ENST00000638488 F5H768 121 aa9.09□□□□□ -0.95
GFAP-228ENST00000638488 UBE2E1P51965 193 aa9.09□□□□□ -0.95
GFAP-228ENST00000638488 HIST1H4AP62805 103 aaKnown RBP9.09□□□□□ -0.95
GFAP-228ENST00000638488 SIRPDQ9H106 197 aa9.09□□□□□ -0.95
GFAP-228ENST00000638488 IGHV3-35A0A0C4DH35 117 aa9.08□□□□□ -0.96
GFAP-228ENST00000638488 SAA4P35542 130 aa9.08□□□□□ -0.96
GFAP-228ENST00000638488 IGHV3OR16-8A0A075B7F1 116 aa9.08□□□□□ -0.96
GFAP-228ENST00000638488 TRACP01848 142 aa9.08□□□□□ -0.96
GFAP-228ENST00000638488 MED14OSP0DP75 135 aa9.08□□□□□ -0.96
GFAP-228ENST00000638488 GPHB5Q86YW7 130 aa9.08□□□□□ -0.96
GFAP-228ENST00000638488 SMCR5Q8TEV8 140 aa9.08□□□□□ -0.96
GFAP-228ENST00000638488 CACNA1BQ00975 2339 aa9.08□□□□□ -0.96
GFAP-228ENST00000638488 LMO4P61968 165 aa9.07□□□□□ -0.96
GFAP-228ENST00000638488 ECSCRQ19T08 205 aa9.07□□□□□ -0.96
GFAP-228ENST00000638488 C9orf47Q6ZRZ4 202 aa9.07□□□□□ -0.96
GFAP-228ENST00000638488 FANCD2OSQ96PS1 177 aa9.07□□□□□ -0.96
GFAP-228ENST00000638488 CELSR1Q9NYQ6 3014 aa9.07□□□□□ -0.96
GFAP-228ENST00000638488 MINOS1Q5TGZ0 78 aa9.07□□□□□ -0.96
GFAP-228ENST00000638488 DCANP1Q8TF63 244 aa9.07□□□□□ -0.96
GFAP-228ENST00000638488 DPH3Q96FX2 82 aa9.07□□□□□ -0.96
GFAP-228ENST00000638488 MINOS1-NBL1R4GNA1 71 aa9.07□□□□□ -0.96
GFAP-228ENST00000638488 A0A0J9YXY3 114 aa9.06□□□□□ -0.96
GFAP-228ENST00000638488 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.06□□□□□ -0.96
GFAP-228ENST00000638488 PEMTQ9UBM1 199 aa9.06□□□□□ -0.96
GFAP-228ENST00000638488 IGHV4OR15-8A0A075B7B6 117 aa9.06□□□□□ -0.96
GFAP-228ENST00000638488 A0A087WW49 117 aa9.06□□□□□ -0.96
GFAP-228ENST00000638488 IGHV1-69P01742 117 aa9.06□□□□□ -0.96
GFAP-228ENST00000638488 MGPP08493 103 aa9.06□□□□□ -0.96
GFAP-228ENST00000638488 RNF182Q8N6D2 247 aa9.06□□□□□ -0.96
GFAP-228ENST00000638488 KIR2DL5BQ8NHK3 375 aa9.06□□□□□ -0.96
GFAP-228ENST00000638488 CLEC2BQ92478 149 aa9.06□□□□□ -0.96
GFAP-228ENST00000638488 ZFAND3Q9H8U3 227 aa9.06□□□□□ -0.96
GFAP-228ENST00000638488 LENEPQ9Y5L5 61 aa9.06□□□□□ -0.96
GFAP-228ENST00000638488 CFAP46Q8IYW2 2715 aa9.05□□□□□ -0.96
GFAP-228ENST00000638488 IGHV7-81A0A0B4J1V7 117 aa9.05□□□□□ -0.96
GFAP-228ENST00000638488 Q8N9W7 124 aa9.05□□□□□ -0.96
GFAP-228ENST00000638488 MAP1AP78559 2803 aaPredicted RBP9.05□□□□□ -0.96
GFAP-228ENST00000638488 LITAFQ99732 161 aa9.05□□□□□ -0.96
GFAP-228ENST00000638488 POLR2KP53803 58 aaKnown RBP9.04□□□□□ -0.96
GFAP-228ENST00000638488 Q8N6K4 173 aa9.04□□□□□ -0.96
GFAP-228ENST00000638488 CCL19Q99731 98 aa9.04□□□□□ -0.96
GFAP-228ENST00000638488 hADV29S1A0JD25 119 aa9.04□□□□□ -0.96
GFAP-228ENST00000638488 I3L3M4 83 aa9.04□□□□□ -0.96
GFAP-228ENST00000638488 VCYO14598 125 aa9.04□□□□□ -0.96
GFAP-228ENST00000638488 CTSGP08311 255 aa9.04□□□□□ -0.96
GFAP-228ENST00000638488 BRD3OSQ6XYD6 125 aa9.04□□□□□ -0.96
GFAP-228ENST00000638488 RPL39P62891 51 aaKnown RBP9.03□□□□□ -0.96
GFAP-228ENST00000638488 PHLDA3Q9Y5J5 127 aa9.03□□□□□ -0.96
GFAP-228ENST00000638488 CACNA1AO00555 2505 aa9.03□□□□□ -0.96
GFAP-228ENST00000638488 SPG11Q96JI7 2443 aa9.03□□□□□ -0.96
GFAP-228ENST00000638488 ATP6V0E1O15342 81 aa9.03□□□□□ -0.96
GFAP-228ENST00000638488 BUB3O43684 328 aa9.03□□□□□ -0.96
GFAP-228ENST00000638488 DAND5Q8N907 189 aa9.03□□□□□ -0.96
GFAP-228ENST00000638488 IGSF10Q6WRI0 2623 aa9.03□□□□□ -0.96
GFAP-228ENST00000638488 ACACBO00763 2458 aa9.03□□□□□ -0.96
GFAP-228ENST00000638488 IGHV4-61A0A0C4DH41 118 aa9.02□□□□□ -0.96
GFAP-228ENST00000638488 G3V318 75 aa9.02□□□□□ -0.96
GFAP-228ENST00000638488 TIMM21Q9BVV7 248 aa9.02□□□□□ -0.96
GFAP-228ENST00000638488 UTP20O75691 2785 aaKnown RBP9.02□□□□□ -0.97
GFAP-228ENST00000638488 TRAV8-3A0A0A6YYJ7 113 aa9.02□□□□□ -0.97
GFAP-228ENST00000638488 PRB1P04280 392 aa9.02□□□□□ -0.97
GFAP-228ENST00000638488 S100A4P26447 101 aaKnown RBP9.02□□□□□ -0.97
GFAP-228ENST00000638488 TMEM61Q8N0U2 210 aa9.02□□□□□ -0.97
GFAP-228ENST00000638488 EEF1AKMT3Q96AZ1 226 aa9.02□□□□□ -0.97
GFAP-228ENST00000638488 CSMD2Q7Z408 3487 aa9.02□□□□□ -0.97
GFAP-228ENST00000638488 CRYBG3Q68DQ2 2970 aa9.02□□□□□ -0.97
GFAP-228ENST00000638488 NXPH4O95158 308 aa9.01□□□□□ -0.97
GFAP-228ENST00000638488 MIAQ16674 131 aa9.01□□□□□ -0.97
GFAP-228ENST00000638488 PIMREGQ9BSJ6 248 aa9.01□□□□□ -0.97
GFAP-228ENST00000638488 FLNCQ14315 2725 aa9.01□□□□□ -0.97
GFAP-228ENST00000638488 TRAV41A0A0B4J266 112 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms