RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 C16orf95Q9H693 158 aa11.18□□□□□ -0.62
SCN8A-214ENST00000637709 TRGV11A0A075B6L2 103 aa11.17□□□□□ -0.62
SCN8A-214ENST00000637709 ORMDL2Q53FV1 153 aa11.17□□□□□ -0.62
SCN8A-214ENST00000637709 ZFP2Q6ZN57 461 aa11.17□□□□□ -0.62
SCN8A-214ENST00000637709 DEFB125Q8N687 156 aa11.17□□□□□ -0.62
SCN8A-214ENST00000637709 TOMM6Q96B49 74 aa11.17□□□□□ -0.62
SCN8A-214ENST00000637709 ATP5LO75964 103 aa11.16□□□□□ -0.62
SCN8A-214ENST00000637709 POLR2KP53803 58 aaKnown RBP11.16□□□□□ -0.62
SCN8A-214ENST00000637709 COL5A1-AS1Q5SY13 56 aa11.16□□□□□ -0.62
SCN8A-214ENST00000637709 POM121L12Q8N7R1 296 aa11.16□□□□□ -0.62
SCN8A-214ENST00000637709 DPM2O94777 84 aa11.15□□□□□ -0.62
SCN8A-214ENST00000637709 LURAP1LQ8IV03 231 aa11.15□□□□□ -0.62
SCN8A-214ENST00000637709 BAALCQ8WXS3 180 aa11.15□□□□□ -0.62
SCN8A-214ENST00000637709 K7EMI3 77 aa11.15□□□□□ -0.62
SCN8A-214ENST00000637709 TSHBP01222 138 aa11.15□□□□□ -0.62
SCN8A-214ENST00000637709 INSP01308 110 aa11.15□□□□□ -0.62
SCN8A-214ENST00000637709 C1orf158Q8N1D5 194 aa11.15□□□□□ -0.62
SCN8A-214ENST00000637709 ZMAT5Q9UDW3 170 aaKnown RBP11.15□□□□□ -0.62
SCN8A-214ENST00000637709 IGHV3-53P01767 116 aa11.14□□□□□ -0.63
SCN8A-214ENST00000637709 A0A087WX48 190 aa11.14□□□□□ -0.63
SCN8A-214ENST00000637709 TRAV8-6A0A0B4J262 113 aa11.14□□□□□ -0.63
SCN8A-214ENST00000637709 IGHV3-38A0A0C4DH36 116 aa11.14□□□□□ -0.63
SCN8A-214ENST00000637709 A8MTW9 85 aa11.14□□□□□ -0.63
SCN8A-214ENST00000637709 LINC00469Q8N7U9 141 aa11.14□□□□□ -0.63
SCN8A-214ENST00000637709 C11orf72Q8NBR9 251 aa11.14□□□□□ -0.63
SCN8A-214ENST00000637709 KIR2DL4Q99706 377 aa11.14□□□□□ -0.63
SCN8A-214ENST00000637709 ZMAT4Q9H898 229 aa11.14□□□□□ -0.63
SCN8A-214ENST00000637709 TRAV2A0A0B4J234 112 aa11.13□□□□□ -0.63
SCN8A-214ENST00000637709 BVES-AS1Q5T3Y7 98 aa11.13□□□□□ -0.63
SCN8A-214ENST00000637709 CHTOPQ9Y3Y2 248 aaKnown RBP11.13□□□□□ -0.63
SCN8A-214ENST00000637709 PRSS29PA6NIE9 313 aa11.12□□□□□ -0.63
SCN8A-214ENST00000637709 VCYO14598 125 aa11.12□□□□□ -0.63
SCN8A-214ENST00000637709 SCGB2A2Q13296 93 aa11.12□□□□□ -0.63
SCN8A-214ENST00000637709 CEMP1Q6PRD7 247 aaPredicted RBP11.12□□□□□ -0.63
SCN8A-214ENST00000637709 TRPT1Q86TN4 253 aaKnown RBP11.12□□□□□ -0.63
SCN8A-214ENST00000637709 NEXN-AS1Q8NBZ9 246 aa11.12□□□□□ -0.63
SCN8A-214ENST00000637709 K7EP13 123 aa11.12□□□□□ -0.63
SCN8A-214ENST00000637709 M0R2P5 195 aa11.12□□□□□ -0.63
SCN8A-214ENST00000637709 PF4P02776 101 aa11.12□□□□□ -0.63
SCN8A-214ENST00000637709 ZNF415Q09FC8 603 aa11.12□□□□□ -0.63
SCN8A-214ENST00000637709 RNASE13Q5GAN3 156 aaKnown RBP11.12□□□□□ -0.63
SCN8A-214ENST00000637709 CFAP126Q5VTH2 177 aa11.12□□□□□ -0.63
SCN8A-214ENST00000637709 MAPKAPK5-AS1Q8N8E1 139 aa11.12□□□□□ -0.63
SCN8A-214ENST00000637709 PHLDA1Q8WV24 401 aaPredicted RBP11.12□□□□□ -0.63
SCN8A-214ENST00000637709 CYSLTR1Q9Y271 337 aa11.12□□□□□ -0.63
SCN8A-214ENST00000637709 BOD1L2Q8IYS8 172 aa11.11□□□□□ -0.63
SCN8A-214ENST00000637709 TRGV1A0A0A0MS02 117 aa11.11□□□□□ -0.63
SCN8A-214ENST00000637709 GIG44P09565 113 aaPredicted RBP11.11□□□□□ -0.63
SCN8A-214ENST00000637709 NPSP0C0P6 89 aa11.11□□□□□ -0.63
SCN8A-214ENST00000637709 PKD1L1Q8TDX9 2849 aa11.1□□□□□ -0.63
SCN8A-214ENST00000637709 TRBV27A0A0K0K1C4 114 aa11.1□□□□□ -0.63
SCN8A-214ENST00000637709 PPP1R17O96001 155 aa11.1□□□□□ -0.63
SCN8A-214ENST00000637709 IGLV1-51P01701 117 aa11.1□□□□□ -0.63
SCN8A-214ENST00000637709 F8VRH5 84 aa11.1□□□□□ -0.63
SCN8A-214ENST00000637709 MRPL52Q86TS9 123 aaKnown RBP11.1□□□□□ -0.63
SCN8A-214ENST00000637709 NAA38Q9BRA0 125 aaKnown RBP11.1□□□□□ -0.63
SCN8A-214ENST00000637709 TRAV25A0A0B4J276 109 aa11.09□□□□□ -0.63
SCN8A-214ENST00000637709 H7C1H1 209 aa11.09□□□□□ -0.63
SCN8A-214ENST00000637709 Q6ZTI0 123 aa11.09□□□□□ -0.63
SCN8A-214ENST00000637709 IGIPA6NJ69 53 aa11.09□□□□□ -0.63
SCN8A-214ENST00000637709 JMJD8Q96S16 334 aa11.08□□□□□ -0.64
SCN8A-214ENST00000637709 C19orf73Q9NVV2 129 aa11.08□□□□□ -0.64
SCN8A-214ENST00000637709 STAB1Q9NY15 2570 aa11.08□□□□□ -0.64
SCN8A-214ENST00000637709 FBN1P35555 2871 aaKnown RBP11.08□□□□□ -0.64
SCN8A-214ENST00000637709 NDUFA7O95182 113 aa11.08□□□□□ -0.64
SCN8A-214ENST00000637709 ZNF479Q96JC4 524 aa11.08□□□□□ -0.64
SCN8A-214ENST00000637709 NOP10Q9NPE3 64 aaKnown RBP11.08□□□□□ -0.64
SCN8A-214ENST00000637709 UFSP1Q6NVU6 142 aa11.07□□□□□ -0.64
SCN8A-214ENST00000637709 C11orf86A6NJI1 115 aa11.07□□□□□ -0.64
SCN8A-214ENST00000637709 RIPPLY3P57055 190 aa11.07□□□□□ -0.64
SCN8A-214ENST00000637709 TMEM97Q5BJF2 176 aa11.07□□□□□ -0.64
SCN8A-214ENST00000637709 TRBV6-5A0A0K0K1A5 114 aa11.06□□□□□ -0.64
SCN8A-214ENST00000637709 I3L3M4 83 aa11.06□□□□□ -0.64
SCN8A-214ENST00000637709 PLNP26678 52 aa11.06□□□□□ -0.64
SCN8A-214ENST00000637709 TNFRSF18Q9Y5U5 241 aa11.06□□□□□ -0.64
SCN8A-214ENST00000637709 IGLV4-69A0A075B6H9 119 aa11.05□□□□□ -0.64
SCN8A-214ENST00000637709 TRBV25-1A0A075B6N4 114 aa11.05□□□□□ -0.64
SCN8A-214ENST00000637709 IGHV3-64A0A075B6Q5 118 aa11.05□□□□□ -0.64
SCN8A-214ENST00000637709 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.05□□□□□ -0.64
SCN8A-214ENST00000637709 IGKV2-29A2NJV5 120 aaPredicted RBP11.05□□□□□ -0.64
SCN8A-214ENST00000637709 A8MWV9 139 aa11.05□□□□□ -0.64
SCN8A-214ENST00000637709 C12orf54Q6X4T0 127 aa11.05□□□□□ -0.64
SCN8A-214ENST00000637709 RNASE8Q8TDE3 154 aaKnown RBP11.05□□□□□ -0.64
SCN8A-214ENST00000637709 RAB37Q96AX2 223 aa11.05□□□□□ -0.64
SCN8A-214ENST00000637709 TRAV12-1A0A0B4J245 112 aa11.04□□□□□ -0.64
SCN8A-214ENST00000637709 TAX1BP3O14907 124 aa11.04□□□□□ -0.64
SCN8A-214ENST00000637709 LINC00482Q8N8I6 264 aa11.04□□□□□ -0.64
SCN8A-214ENST00000637709 ZNRF2Q8NHG8 242 aa11.04□□□□□ -0.64
SCN8A-214ENST00000637709 CST9LQ9H4G1 147 aa11.04□□□□□ -0.64
SCN8A-214ENST00000637709 DLEU1O43261 78 aa11.03□□□□□ -0.64
SCN8A-214ENST00000637709 GCSHP23434 173 aa11.03□□□□□ -0.64
SCN8A-214ENST00000637709 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.03□□□□□ -0.64
SCN8A-214ENST00000637709 BEAN1Q3B7T3 259 aa11.03□□□□□ -0.64
SCN8A-214ENST00000637709 C20orf203Q8NBC4 194 aa11.03□□□□□ -0.64
SCN8A-214ENST00000637709 COX11Q9Y6N1 276 aa11.03□□□□□ -0.64
SCN8A-214ENST00000637709 MAST4O15021 2626 aa11.02□□□□□ -0.64
SCN8A-214ENST00000637709 GAGE12BA1L429 117 aa11.02□□□□□ -0.64
SCN8A-214ENST00000637709 GAGE7O76087 117 aa11.02□□□□□ -0.64
SCN8A-214ENST00000637709 GAGE12FP0CL80 117 aa11.02□□□□□ -0.64
SCN8A-214ENST00000637709 GAGE12GP0CL81 117 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms