RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 RHODO00212 210 aa11.11□□□□□ -0.63
THUMPD1-206ENST00000636554 Q1RN00 199 aa11.11□□□□□ -0.63
THUMPD1-206ENST00000636554 BEX4Q9NWD9 120 aaPredicted RBP11.11□□□□□ -0.63
THUMPD1-206ENST00000636554 IGHV1-69P01742 117 aa11.11□□□□□ -0.63
THUMPD1-206ENST00000636554 NSUN5P1Q3KNT7 163 aa11.11□□□□□ -0.63
THUMPD1-206ENST00000636554 C9orf85Q96MD7 179 aa11.11□□□□□ -0.63
THUMPD1-206ENST00000636554 ANAPC13Q9BS18 74 aa11.11□□□□□ -0.63
THUMPD1-206ENST00000636554 IGHV4-39P01824 125 aa11.1□□□□□ -0.63
THUMPD1-206ENST00000636554 IGHV4-38-2P0DP08 117 aa11.1□□□□□ -0.63
THUMPD1-206ENST00000636554 Q8N1Y9 231 aa11.1□□□□□ -0.63
THUMPD1-206ENST00000636554 NTN5Q8WTR8 489 aaPredicted RBP11.1□□□□□ -0.63
THUMPD1-206ENST00000636554 USMG5Q96IX5 58 aa11.1□□□□□ -0.63
THUMPD1-206ENST00000636554 A0A0B4J2C4 111 aa11.1□□□□□ -0.63
THUMPD1-206ENST00000636554 H3BUX3 64 aa11.1□□□□□ -0.63
THUMPD1-206ENST00000636554 IGHG2P01859 326 aa11.09□□□□□ -0.63
THUMPD1-206ENST00000636554 CITED1Q99966 193 aa11.09□□□□□ -0.63
THUMPD1-206ENST00000636554 TMEM95Q3KNT9 176 aa11.09□□□□□ -0.63
THUMPD1-206ENST00000636554 ZFAND6Q6FIF0 208 aa11.09□□□□□ -0.63
THUMPD1-206ENST00000636554 C20orf203Q8NBC4 194 aa11.09□□□□□ -0.63
THUMPD1-206ENST00000636554 IGLV4-3A0A075B6K6 122 aa11.08□□□□□ -0.64
THUMPD1-206ENST00000636554 CRLF1O75462 422 aa11.08□□□□□ -0.64
THUMPD1-206ENST00000636554 PRRC2AP48634 2157 aaKnown RBP11.08□□□□□ -0.64
THUMPD1-206ENST00000636554 A0A0J9YXY3 114 aa11.08□□□□□ -0.64
THUMPD1-206ENST00000636554 TEX49A0A1B0GTD5 131 aa11.08□□□□□ -0.64
THUMPD1-206ENST00000636554 RHOHQ15669 191 aa11.08□□□□□ -0.64
THUMPD1-206ENST00000636554 TEX29Q8N6K0 151 aa11.08□□□□□ -0.64
THUMPD1-206ENST00000636554 DOPEY2Q9Y3R5 2298 aa11.08□□□□□ -0.64
THUMPD1-206ENST00000636554 TMEM262E9PQX1 116 aa11.07□□□□□ -0.64
THUMPD1-206ENST00000636554 SPINK13Q1W4C9 94 aa11.07□□□□□ -0.64
THUMPD1-206ENST00000636554 SPXQ9BT56 116 aa11.07□□□□□ -0.64
THUMPD1-206ENST00000636554 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.07□□□□□ -0.647e-18■■■■■ 35.4
THUMPD1-206ENST00000636554 TRAV8-3A0A0A6YYJ7 113 aa11.07□□□□□ -0.64
THUMPD1-206ENST00000636554 TRAV4A0A0B4J268 109 aa11.07□□□□□ -0.64
THUMPD1-206ENST00000636554 M0R2P5 195 aa11.07□□□□□ -0.64
THUMPD1-206ENST00000636554 ID1P41134 155 aa11.07□□□□□ -0.64
THUMPD1-206ENST00000636554 KLRB1Q12918 225 aa11.07□□□□□ -0.64
THUMPD1-206ENST00000636554 LINC01620Q4KN68 170 aa11.07□□□□□ -0.64
THUMPD1-206ENST00000636554 RNASE13Q5GAN3 156 aaKnown RBP11.07□□□□□ -0.64
THUMPD1-206ENST00000636554 CEMP1Q6PRD7 247 aaPredicted RBP11.07□□□□□ -0.64
THUMPD1-206ENST00000636554 TRIAP1O43715 76 aa11.06□□□□□ -0.64
THUMPD1-206ENST00000636554 IGHV3-30-3P0DP02 117 aa11.06□□□□□ -0.64
THUMPD1-206ENST00000636554 SS18L2Q9UHA2 77 aa11.06□□□□□ -0.64
THUMPD1-206ENST00000636554 IGHV3-73A0A0B4J1V6 119 aa11.05□□□□□ -0.64
THUMPD1-206ENST00000636554 H3BUA1 57 aa11.05□□□□□ -0.64
THUMPD1-206ENST00000636554 NHLRC4P0CG21 123 aaPredicted RBP11.05□□□□□ -0.64
THUMPD1-206ENST00000636554 NPC2P61916 151 aa11.05□□□□□ -0.64
THUMPD1-206ENST00000636554 ATXN8Q156A1 80 aa11.05□□□□□ -0.64
THUMPD1-206ENST00000636554 Q6ZSV7 163 aa11.05□□□□□ -0.64
THUMPD1-206ENST00000636554 LITAFQ99732 161 aa11.05□□□□□ -0.64
THUMPD1-206ENST00000636554 I3L3M4 83 aa11.05□□□□□ -0.64
THUMPD1-206ENST00000636554 IGLV1-40P01703 118 aa11.05□□□□□ -0.64
THUMPD1-206ENST00000636554 FAM104AQ969W3 186 aa11.05□□□□□ -0.64
THUMPD1-206ENST00000636554 IGHV4-61A0A0C4DH41 118 aa11.04□□□□□ -0.64
THUMPD1-206ENST00000636554 A8MZ25 164 aa11.04□□□□□ -0.64
THUMPD1-206ENST00000636554 BRI3O95415 125 aa11.04□□□□□ -0.64
THUMPD1-206ENST00000636554 C10orf99Q6UWK7 81 aa11.04□□□□□ -0.64
THUMPD1-206ENST00000636554 CELSR2Q9HCU4 2923 aa11.04□□□□□ -0.64
THUMPD1-206ENST00000636554 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.04□□□□□ -0.64
THUMPD1-206ENST00000636554 A6NDX4 124 aa11.04□□□□□ -0.64
THUMPD1-206ENST00000636554 M0QXV9 152 aa11.04□□□□□ -0.64
THUMPD1-206ENST00000636554 CSPG4Q6UVK1 2322 aa11.03□□□□□ -0.64
THUMPD1-206ENST00000636554 IGHV1OR15-1A0A075B7D0 117 aa11.03□□□□□ -0.64
THUMPD1-206ENST00000636554 A0A0J9YX75 114 aa11.03□□□□□ -0.64
THUMPD1-206ENST00000636554 PRSS2P07478 247 aa11.03□□□□□ -0.64
THUMPD1-206ENST00000636554 CD28P10747 220 aa11.03□□□□□ -0.64
THUMPD1-206ENST00000636554 NBL1P41271 181 aa11.03□□□□□ -0.64
THUMPD1-206ENST00000636554 PROK1P58294 105 aa11.03□□□□□ -0.64
THUMPD1-206ENST00000636554 ADAMTSL4-AS1Q5T5F5 129 aa11.03□□□□□ -0.64
THUMPD1-206ENST00000636554 TIMM21Q9BVV7 248 aa11.03□□□□□ -0.64
THUMPD1-206ENST00000636554 SNCGO76070 127 aa11.03□□□□□ -0.64
THUMPD1-206ENST00000636554 CSMD2Q7Z408 3487 aa11.02□□□□□ -0.64
THUMPD1-206ENST00000636554 C19orf84I3L1E1 186 aa11.02□□□□□ -0.65
THUMPD1-206ENST00000636554 SPG11Q96JI7 2443 aa11.01□□□□□ -0.65
THUMPD1-206ENST00000636554 HTN1P15515 57 aa11.01□□□□□ -0.65
THUMPD1-206ENST00000636554 CFHR3Q02985 330 aa11.01□□□□□ -0.65
THUMPD1-206ENST00000636554 GAGE2BQ13066 116 aa11.01□□□□□ -0.65
THUMPD1-206ENST00000636554 GAGE2EQ4V326 116 aa11.01□□□□□ -0.65
THUMPD1-206ENST00000636554 ODF3Q96PU9 254 aa11.01□□□□□ -0.65
THUMPD1-206ENST00000636554 GAGE2DQ9UEU5 116 aa11.01□□□□□ -0.65
THUMPD1-206ENST00000636554 Q9UF83 564 aa11.01□□□□□ -0.65
THUMPD1-206ENST00000636554 TRBV30A0A0K0K1B3 111 aa11.01□□□□□ -0.65
THUMPD1-206ENST00000636554 B5MCH6 92 aa11.01□□□□□ -0.65
THUMPD1-206ENST00000636554 TRBV10-2A0A0K0K1G8 114 aa11□□□□□ -0.65
THUMPD1-206ENST00000636554 K7EMT4 169 aa11□□□□□ -0.65
THUMPD1-206ENST00000636554 ICOSQ9Y6W8 199 aa11□□□□□ -0.65
THUMPD1-206ENST00000636554 PRM2P04554 102 aa11□□□□□ -0.65
THUMPD1-206ENST00000636554 RBMY1A1P0DJD3 496 aaKnown RBP11□□□□□ -0.65
THUMPD1-206ENST00000636554 RBMY1CP0DJD4 496 aa11□□□□□ -0.65
THUMPD1-206ENST00000636554 NDUFV3P56181 108 aaKnown RBP11□□□□□ -0.65
THUMPD1-206ENST00000636554 RBMY1FQ15415 496 aaKnown RBP11□□□□□ -0.65
THUMPD1-206ENST00000636554 CLEC2BQ92478 149 aa11□□□□□ -0.65
THUMPD1-206ENST00000636554 TRAV8-4A0A0B4J246 113 aa10.99□□□□□ -0.65
THUMPD1-206ENST00000636554 H3BMM0 161 aa10.99□□□□□ -0.65
THUMPD1-206ENST00000636554 UBE2WQ96B02 151 aa10.99□□□□□ -0.65
THUMPD1-206ENST00000636554 NACAE9PAV3 2078 aa10.99□□□□□ -0.65
THUMPD1-206ENST00000636554 CREBBPQ92793 2442 aa10.99□□□□□ -0.65
THUMPD1-206ENST00000636554 RPL13AP40429 203 aaKnown RBP10.99□□□□□ -0.65
THUMPD1-206ENST00000636554 SNRPD3P62318 126 aaKnown RBP10.99□□□□□ -0.65
THUMPD1-206ENST00000636554 MRPS36P82909 103 aaKnown RBP10.99□□□□□ -0.65
THUMPD1-206ENST00000636554 GAGE5Q13069 117 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms