RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 GLS2Q9UI32 602 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 FUT9Q9Y231 359 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 TP53TG1Q9Y2A0 90 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 UFC1Q9Y3C8 167 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 LSM5Q9Y4Y9 91 aaKnown RBP0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 URGCP-MRPS24S4R325 110 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 V9GYY9 64 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 USH2AO75445 5202 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 NEBP20929 6669 aa0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 MUC12Q9UKN1 5478 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 SSPOA2VEC9 5147 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 TRBV24-1A0A075B6N3 115 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 TRGV2A0A075B6R0 118 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 TRAV14DV4A0A0A6YYC5 116 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 LOC100130705A0A1B0GUX0 176 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 IGSF23A1L1A6 192 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 GRIFINA4D1Z8 144 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 EFCAB10A6NFE3 127 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 RBFOX3A6NFN3 312 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 IFITM5A6NNB3 132 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 CEBPZOSA8MTT3 80 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 FAM25AB3EWG3 89 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 FAM25CB3EWG5 89 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 FAM25GB3EWG6 89 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 C9JCJ5 164 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 H3BQ15 152 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 K7EPK0 472 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 M0QXV9 152 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 M0R036 132 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 GPR31O00270 319 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 MRPS14O60783 128 aaKnown RBP0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 SULT1C4O75897 302 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 ATG12O94817 140 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 FAM107AO95990 144 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 ANGP03950 147 aaKnown RBP0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 CD3DP04234 171 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 CRYGDP07320 174 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 MGPP08493 103 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 OR5G3P0C626 314 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 OR10J4P0C629 311 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 METTL15P1P0C7V9 234 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 SPART-AS1P0CW21 52 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 TRAPPC2P0DI81 140 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 TRAPPC2BP0DI82 140 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 ARL14EPLP0DKL9 152 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 LINC00694P0DN24 101 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 GZMBP10144 247 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 BCL2P10415 239 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 NQO2P16083 231 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 ZNF22P17026 224 aaPredicted RBP0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 ORM2P19652 201 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 CXCL3P19876 107 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 TUBG1P23258 451 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 CD40LGP29965 261 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 SRIP30626 198 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 SDC2P34741 201 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 PSMB3P49720 205 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 EIF2B2P49770 351 aaKnown RBP0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 RAB5CP51148 216 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 ZNF80P51504 273 aaPredicted RBP0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 CRYBA4P53673 196 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 CCL18P55774 89 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 TCL1AP56279 114 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 PIGPP57054 158 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 KRTAP12-1P59990 96 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 S100A10P60903 97 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 VBP1P61758 197 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 SNRPGP62308 76 aaKnown RBP0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 POLR2GP62487 172 aaKnown RBP eCLIP0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 SUPT4H1P63272 117 aaKnown RBP0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 UBE2L3P68036 154 aaKnown RBP0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 PSG9Q00887 426 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 PPP1R1AQ13522 171 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 TAL2Q16559 108 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 KRTAP6-3Q3LI67 103 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 NMSQ5H8A3 153 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 OR10J3Q5JRS4 329 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 IBA57Q5T440 356 aaKnown RBP0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 OGFRL1Q5TC84 451 aaPredicted RBP0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 GLT8D1Q68CQ7 371 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 LAMTOR1Q6IAA8 161 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 LPCAT3Q6P1A2 487 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 PATE2Q6UY27 113 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 FOXI2Q6ZQN5 318 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 PHF5AQ7RTV0 110 aaKnown RBP0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 FAM19A5Q7Z5A7 132 aaPredicted RBP0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 Q86TA4 180 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 C8orf59Q8N0T1 100 aaPredicted RBP0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 C3orf22Q8N5N4 141 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 ZFAND2AQ8N6M9 145 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 FER1L6-AS1Q8NA97 138 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 ZNF555Q8NEP9 628 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 OR10P1Q8NGE3 313 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 GLYATL2Q8WU03 294 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 RAB2BQ8WUD1 216 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 TMEM263Q8WUH6 116 aaKnown RBP0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 HIST1H2BAQ96A08 127 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 CMTM5Q96DZ9 223 aa0.42□□□□□ -2.34
SMARCB1-209ENST00000635578 FMC1Q96HJ9 113 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 209.5 ms