RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 C20orf203Q8NBC4 194 aa7.9□□□□□ -1.14
PSPC1-207ENST00000635251 VPREB3Q9UKI3 123 aa7.9□□□□□ -1.14
PSPC1-207ENST00000635251 KNCNA6PVL3 124 aa7.9□□□□□ -1.15
PSPC1-207ENST00000635251 LEPROTO15243 131 aa7.9□□□□□ -1.15
PSPC1-207ENST00000635251 AZU1P20160 251 aa7.9□□□□□ -1.15
PSPC1-207ENST00000635251 TCTEX1D4Q5JR98 221 aa7.9□□□□□ -1.15
PSPC1-207ENST00000635251 ZNF418Q8TF45 676 aaPredicted RBP7.9□□□□□ -1.15
PSPC1-207ENST00000635251 VCX2Q9H322 139 aa7.9□□□□□ -1.15
PSPC1-207ENST00000635251 SPTAN1Q13813 2472 aaKnown RBP7.9□□□□□ -1.15
PSPC1-207ENST00000635251 TMEM223A0PJW6 202 aa7.89□□□□□ -1.15
PSPC1-207ENST00000635251 J3QLI3 93 aa7.89□□□□□ -1.15
PSPC1-207ENST00000635251 CFAP126Q5VTH2 177 aa7.89□□□□□ -1.15
PSPC1-207ENST00000635251 UBE2E2Q96LR5 201 aa7.89□□□□□ -1.15
PSPC1-207ENST00000635251 A0A0J9YXV3 536 aa7.89□□□□□ -1.15
PSPC1-207ENST00000635251 CFC1BP0CG36 223 aa7.89□□□□□ -1.15
PSPC1-207ENST00000635251 CFC1P0CG37 223 aa7.89□□□□□ -1.15
PSPC1-207ENST00000635251 SCGB1C2P0DMR2 95 aa7.89□□□□□ -1.15
PSPC1-207ENST00000635251 INSL3P51460 131 aa7.89□□□□□ -1.15
PSPC1-207ENST00000635251 SMAGPQ0VAQ4 97 aa7.89□□□□□ -1.15
PSPC1-207ENST00000635251 IGLV4-3A0A075B6K6 122 aa7.88□□□□□ -1.15
PSPC1-207ENST00000635251 RHODO00212 210 aa7.88□□□□□ -1.15
PSPC1-207ENST00000635251 ZNF22P17026 224 aaPredicted RBP7.88□□□□□ -1.15
PSPC1-207ENST00000635251 DEFB131AP59861 70 aa7.88□□□□□ -1.15
PSPC1-207ENST00000635251 UBE2D3P61077 147 aa7.88□□□□□ -1.15
PSPC1-207ENST00000635251 UBE2D2P62837 147 aa7.88□□□□□ -1.15
PSPC1-207ENST00000635251 CELSR1Q9NYQ6 3014 aa7.88□□□□□ -1.15
PSPC1-207ENST00000635251 TRAV2A0A0B4J234 112 aa7.87□□□□□ -1.15
PSPC1-207ENST00000635251 RBMY1A1P0DJD3 496 aaKnown RBP7.87□□□□□ -1.15
PSPC1-207ENST00000635251 RBMY1CP0DJD4 496 aa7.87□□□□□ -1.15
PSPC1-207ENST00000635251 CD28P10747 220 aa7.87□□□□□ -1.15
PSPC1-207ENST00000635251 SLURP1P55000 103 aa7.87□□□□□ -1.15
PSPC1-207ENST00000635251 RBMY1FQ15415 496 aaKnown RBP7.87□□□□□ -1.15
PSPC1-207ENST00000635251 C10orf126Q8N4M7 172 aa7.87□□□□□ -1.15
PSPC1-207ENST00000635251 DUX3Q96PT4 197 aa7.87□□□□□ -1.15
PSPC1-207ENST00000635251 AMELXQ99217 191 aa7.87□□□□□ -1.15
PSPC1-207ENST00000635251 C1QTNF4Q9BXJ3 329 aa7.87□□□□□ -1.15
PSPC1-207ENST00000635251 ZNF702PQ9H963 129 aa7.87□□□□□ -1.15
PSPC1-207ENST00000635251 DEFB136Q30KP8 78 aa7.87□□□□□ -1.15
PSPC1-207ENST00000635251 SPATA25Q9BR10 227 aa7.87□□□□□ -1.15
PSPC1-207ENST00000635251 BEX4Q9NWD9 120 aaPredicted RBP7.87□□□□□ -1.15
PSPC1-207ENST00000635251 PRO1854Q9UHT4 67 aa7.87□□□□□ -1.15
PSPC1-207ENST00000635251 TNFRSF18Q9Y5U5 241 aa7.87□□□□□ -1.15
PSPC1-207ENST00000635251 TCL1BO95988 128 aa7.86□□□□□ -1.15
PSPC1-207ENST00000635251 SMCPP49901 116 aaPredicted RBP7.86□□□□□ -1.15
PSPC1-207ENST00000635251 PROK1P58294 105 aa7.86□□□□□ -1.15
PSPC1-207ENST00000635251 FOXI1Q12951 378 aa7.86□□□□□ -1.15
PSPC1-207ENST00000635251 Q6YL49 198 aa7.86□□□□□ -1.15
PSPC1-207ENST00000635251 ACACBO00763 2458 aa7.86□□□□□ -1.15
PSPC1-207ENST00000635251 TRBV20-1A0A075B6N2 111 aa7.86□□□□□ -1.15
PSPC1-207ENST00000635251 ATP6V0E2Q8NHE4 81 aa7.86□□□□□ -1.15
PSPC1-207ENST00000635251 RAX2Q96IS3 184 aa7.86□□□□□ -1.15
PSPC1-207ENST00000635251 CHD8Q9HCK8 2581 aa7.85□□□□□ -1.15
PSPC1-207ENST00000635251 C18orf65Q6ZTR6 163 aa7.85□□□□□ -1.15
PSPC1-207ENST00000635251 RNF152Q8N8N0 203 aa7.85□□□□□ -1.15
PSPC1-207ENST00000635251 A0A096LNT2 108 aa7.85□□□□□ -1.15
PSPC1-207ENST00000635251 PRM2P04554 102 aa7.85□□□□□ -1.15
PSPC1-207ENST00000635251 SCGB1A1P11684 91 aa7.85□□□□□ -1.15
PSPC1-207ENST00000635251 KHDC1LQ5JSQ8 128 aa7.85□□□□□ -1.15
PSPC1-207ENST00000635251 MUSTN1Q8IVN3 82 aa7.85□□□□□ -1.15
PSPC1-207ENST00000635251 A8MWV9 139 aa7.84□□□□□ -1.15
PSPC1-207ENST00000635251 H3BMM0 161 aa7.84□□□□□ -1.15
PSPC1-207ENST00000635251 H7C2G1 150 aa7.84□□□□□ -1.15
PSPC1-207ENST00000635251 ZNF415Q09FC8 603 aa7.84□□□□□ -1.15
PSPC1-207ENST00000635251 RNASE13Q5GAN3 156 aaKnown RBP7.84□□□□□ -1.15
PSPC1-207ENST00000635251 CEMP1Q6PRD7 247 aaPredicted RBP7.84□□□□□ -1.15
PSPC1-207ENST00000635251 PTH2Q96A98 100 aa7.84□□□□□ -1.15
PSPC1-207ENST00000635251 TIMM21Q9BVV7 248 aa7.84□□□□□ -1.15
PSPC1-207ENST00000635251 M0R2P5 195 aa7.83□□□□□ -1.16
PSPC1-207ENST00000635251 Q1RN00 199 aa7.83□□□□□ -1.16
PSPC1-207ENST00000635251 PEMTQ9UBM1 199 aa7.83□□□□□ -1.16
PSPC1-207ENST00000635251 PYGO1Q9Y3Y4 419 aa7.83□□□□□ -1.16
PSPC1-207ENST00000635251 VPS13CQ709C8 3753 aa7.83□□□□□ -1.16
PSPC1-207ENST00000635251 ITPR1Q14643 2758 aa7.83□□□□□ -1.16
PSPC1-207ENST00000635251 ADARB2-AS1A8MUL3 147 aa7.83□□□□□ -1.16
PSPC1-207ENST00000635251 IGHV3-30-3P0DP02 117 aa7.83□□□□□ -1.16
PSPC1-207ENST00000635251 EDA2RQ9HAV5 297 aa7.83□□□□□ -1.16
PSPC1-207ENST00000635251 ERG28Q9UKR5 140 aa7.83□□□□□ -1.16
PSPC1-207ENST00000635251 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.82□□□□□ -1.16
PSPC1-207ENST00000635251 A0A0J9YXY3 114 aa7.82□□□□□ -1.16
PSPC1-207ENST00000635251 RBMY1BA6NDE4 496 aaKnown RBP7.82□□□□□ -1.16
PSPC1-207ENST00000635251 RBMY1EA6NEQ0 496 aaKnown RBP7.82□□□□□ -1.16
PSPC1-207ENST00000635251 RBMY1DP0C7P1 496 aaKnown RBP7.82□□□□□ -1.16
PSPC1-207ENST00000635251 IGHV4-31P0DP07 118 aa7.82□□□□□ -1.16
PSPC1-207ENST00000635251 TMEM61Q8N0U2 210 aa7.82□□□□□ -1.16
PSPC1-207ENST00000635251 DYNLRB2Q8TF09 96 aa7.82□□□□□ -1.16
PSPC1-207ENST00000635251 LINC01587Q99440 93 aa7.82□□□□□ -1.16
PSPC1-207ENST00000635251 TEN1Q86WV5 123 aa7.82□□□□□ -1.16
PSPC1-207ENST00000635251 TMEM263Q8WUH6 116 aaKnown RBP7.82□□□□□ -1.16
PSPC1-207ENST00000635251 PPDPFLQ8WWR9 84 aa7.82□□□□□ -1.16
PSPC1-207ENST00000635251 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.82□□□□□ -1.162e-23■■■■■ 173.4
PSPC1-207ENST00000635251 TRAV8-3A0A0A6YYJ7 113 aa7.81□□□□□ -1.16
PSPC1-207ENST00000635251 A0A0B4J2C4 111 aa7.81□□□□□ -1.16
PSPC1-207ENST00000635251 FSHBP01225 129 aa7.81□□□□□ -1.16
PSPC1-207ENST00000635251 IGHV3-33P01772 117 aa7.81□□□□□ -1.16
PSPC1-207ENST00000635251 MRPS36P82909 103 aaKnown RBP7.81□□□□□ -1.16
PSPC1-207ENST00000635251 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.81□□□□□ -1.16
PSPC1-207ENST00000635251 IGKV2-29A2NJV5 120 aaPredicted RBP7.81□□□□□ -1.16
PSPC1-207ENST00000635251 CRYBA4P53673 196 aa7.81□□□□□ -1.16
PSPC1-207ENST00000635251 Q6ZSN1 163 aa7.81□□□□□ -1.16
PSPC1-207ENST00000635251 Q9UF83 564 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms