RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 HLA-DQA1P01909 254 aa13.04□□□□□ -0.32
PNKP-224ENST00000631020 CRYGDP07320 174 aa13.04□□□□□ -0.32
PNKP-224ENST00000631020 CACNG7P62955 275 aa13.04□□□□□ -0.32
PNKP-224ENST00000631020 NUP35Q8NFH5 326 aa13.04□□□□□ -0.32
PNKP-224ENST00000631020 DNAH6Q9C0G6 4158 aa13.03□□□□□ -0.32
PNKP-224ENST00000631020 A0A087WWL8 130 aa13.03□□□□□ -0.32
PNKP-224ENST00000631020 IQCJQ1A5X6 159 aa13.03□□□□□ -0.32
PNKP-224ENST00000631020 Q6ZSN1 163 aa13.03□□□□□ -0.32
PNKP-224ENST00000631020 TRGV4A0A0C4DH28 118 aa13.02□□□□□ -0.33
PNKP-224ENST00000631020 VSIG2Q96IQ7 327 aa13.02□□□□□ -0.33
PNKP-224ENST00000631020 NAT8BQ9UHF3 227 aa13.02□□□□□ -0.33
PNKP-224ENST00000631020 KIF25-AS1Q9Y6Z4 181 aa13.02□□□□□ -0.33
PNKP-224ENST00000631020 TRAV26-1A0A087WT03 109 aa13.01□□□□□ -0.33
PNKP-224ENST00000631020 P0DMU3 169 aa13.01□□□□□ -0.33
PNKP-224ENST00000631020 FAM231AP0DMU4 169 aa13.01□□□□□ -0.33
PNKP-224ENST00000631020 FAM231CP0DMU5 169 aa13.01□□□□□ -0.33
PNKP-224ENST00000631020 Q0VG73 95 aa13.01□□□□□ -0.33
PNKP-224ENST00000631020 TWIST1Q15672 202 aa13.01□□□□□ -0.33
PNKP-224ENST00000631020 FAM74A4Q5TZK3 123 aa13.01□□□□□ -0.33
PNKP-224ENST00000631020 ZFP2Q6ZN57 461 aa13.01□□□□□ -0.33
PNKP-224ENST00000631020 C14orf178Q8N769 122 aaPredicted RBP13.01□□□□□ -0.33
PNKP-224ENST00000631020 HHLA3Q9XRX5 114 aa13.01□□□□□ -0.33
PNKP-224ENST00000631020 A0A0J9YY99 117 aa13□□□□□ -0.33
PNKP-224ENST00000631020 CIDEAO60543 219 aa13□□□□□ -0.33
PNKP-224ENST00000631020 ESDP10768 282 aa13□□□□□ -0.33
PNKP-224ENST00000631020 GATA1P15976 413 aaPredicted RBP13□□□□□ -0.33
PNKP-224ENST00000631020 EVI2AP22794 236 aa13□□□□□ -0.33
PNKP-224ENST00000631020 CRYBA4P53673 196 aa13□□□□□ -0.33
PNKP-224ENST00000631020 LINC00315P59091 139 aa13□□□□□ -0.33
PNKP-224ENST00000631020 OR10J3Q5JRS4 329 aa13□□□□□ -0.33
PNKP-224ENST00000631020 A0A1B0GUT8 65 aa12.99□□□□□ -0.33
PNKP-224ENST00000631020 BAGE3Q86Y29 109 aa12.99□□□□□ -0.33
PNKP-224ENST00000631020 PRO0255Q9UI72 69 aa12.99□□□□□ -0.33
PNKP-224ENST00000631020 RAB4BP61018 213 aa12.98□□□□□ -0.33
PNKP-224ENST00000631020 ATP5L2Q7Z4Y8 100 aa12.98□□□□□ -0.33
PNKP-224ENST00000631020 AP1S3Q96PC3 154 aa12.98□□□□□ -0.33
PNKP-224ENST00000631020 RHODO00212 210 aa12.98□□□□□ -0.33
PNKP-224ENST00000631020 TMEM136Q6ZRR5 245 aa12.98□□□□□ -0.33
PNKP-224ENST00000631020 SLC25A29Q8N8R3 303 aa12.98□□□□□ -0.33
PNKP-224ENST00000631020 DNAH10Q8IVF4 4471 aa12.97□□□□□ -0.33
PNKP-224ENST00000631020 PAX4O43316 350 aa12.97□□□□□ -0.33
PNKP-224ENST00000631020 SLAQ13239 276 aa12.97□□□□□ -0.33
PNKP-224ENST00000631020 BORCS7Q96B45 105 aa12.97□□□□□ -0.33
PNKP-224ENST00000631020 H3BNG1 76 aa12.96□□□□□ -0.33
PNKP-224ENST00000631020 APCSP02743 223 aa12.96□□□□□ -0.33
PNKP-224ENST00000631020 Q9UF83 564 aa12.96□□□□□ -0.33
PNKP-224ENST00000631020 LOC100131303A0A0U1RQF7 123 aa12.95□□□□□ -0.34
PNKP-224ENST00000631020 TRBV6-4A0A1B0GX49 114 aa12.95□□□□□ -0.34
PNKP-224ENST00000631020 RIGQ13278 110 aa12.95□□□□□ -0.34
PNKP-224ENST00000631020 MRPL54Q6P161 138 aaKnown RBP12.95□□□□□ -0.34
PNKP-224ENST00000631020 SCGB1D1O95968 90 aa12.94□□□□□ -0.34
PNKP-224ENST00000631020 SMIM17P0DL12 118 aa12.94□□□□□ -0.34
PNKP-224ENST00000631020 CDPF1Q6NVV7 123 aa12.94□□□□□ -0.34
PNKP-224ENST00000631020 DPH3P1Q9H4G8 78 aa12.94□□□□□ -0.34
PNKP-224ENST00000631020 DDTP30046 118 aa12.93□□□□□ -0.34
PNKP-224ENST00000631020 A0A1B0GXF2 115 aa12.93□□□□□ -0.34
PNKP-224ENST00000631020 F5H697 171 aa12.93□□□□□ -0.34
PNKP-224ENST00000631020 SERF1AO75920 110 aa12.93□□□□□ -0.34
PNKP-224ENST00000631020 NUDT3O95989 172 aa12.93□□□□□ -0.34
PNKP-224ENST00000631020 MGPP08493 103 aa12.93□□□□□ -0.34
PNKP-224ENST00000631020 GYPEP15421 78 aa12.93□□□□□ -0.34
PNKP-224ENST00000631020 ZNF56Q15929 161 aa12.93□□□□□ -0.34
PNKP-224ENST00000631020 HECTD4Q9Y4D8 3996 aa12.92□□□□□ -0.34
PNKP-224ENST00000631020 A0A096LPF7 62 aa12.92□□□□□ -0.34
PNKP-224ENST00000631020 CAMPP49913 170 aa12.92□□□□□ -0.34
PNKP-224ENST00000631020 C15orf53Q8NAA6 179 aa12.92□□□□□ -0.34
PNKP-224ENST00000631020 TMEM191AQ9H0A3 160 aa12.92□□□□□ -0.34
PNKP-224ENST00000631020 K7EQD1 137 aa12.91□□□□□ -0.34
PNKP-224ENST00000631020 RHOHQ15669 191 aa12.91□□□□□ -0.34
PNKP-224ENST00000631020 SMIM15Q7Z3B0 74 aa12.91□□□□□ -0.34
PNKP-224ENST00000631020 PRADC1Q9BSG0 188 aa12.91□□□□□ -0.34
PNKP-224ENST00000631020 SUMO4Q6EEV6 95 aa12.9□□□□□ -0.34
PNKP-224ENST00000631020 LINC00336Q6ZUF6 198 aa12.9□□□□□ -0.34
PNKP-224ENST00000631020 A0A1B0GW15 77 aa12.89□□□□□ -0.35
PNKP-224ENST00000631020 M0QY20 66 aa12.89□□□□□ -0.35
PNKP-224ENST00000631020 SRIP30626 198 aa12.89□□□□□ -0.35
PNKP-224ENST00000631020 HBBP68871 147 aa12.89□□□□□ -0.35
PNKP-224ENST00000631020 RNF185Q96GF1 192 aa12.89□□□□□ -0.35
PNKP-224ENST00000631020 PRO1933Q9H354 126 aa12.89□□□□□ -0.35
PNKP-224ENST00000631020 ICOSQ9Y6W8 199 aa12.89□□□□□ -0.35
PNKP-224ENST00000631020 MRPL23Q16540 153 aaKnown RBP12.88□□□□□ -0.35
PNKP-224ENST00000631020 AMN1Q8IY45 258 aa12.88□□□□□ -0.35
PNKP-224ENST00000631020 TRAV26-2A0A0B4J265 109 aa12.88□□□□□ -0.35
PNKP-224ENST00000631020 RAB4AP20338 218 aa12.88□□□□□ -0.35
PNKP-224ENST00000631020 LBHQ53QV2 105 aaPredicted RBP12.88□□□□□ -0.35
PNKP-224ENST00000631020 GATD1Q8NB37 220 aa12.88□□□□□ -0.35
PNKP-224ENST00000631020 GAGE12JA6NER3 117 aa12.87□□□□□ -0.35
PNKP-224ENST00000631020 NUPR1O60356 82 aa12.87□□□□□ -0.35
PNKP-224ENST00000631020 GAGE1Q13065 139 aa12.87□□□□□ -0.35
PNKP-224ENST00000631020 GAGE4Q13068 117 aa12.87□□□□□ -0.35
PNKP-224ENST00000631020 GAGE5Q13069 117 aa12.87□□□□□ -0.35
PNKP-224ENST00000631020 GAGE13Q4V321 117 aa12.87□□□□□ -0.35
PNKP-224ENST00000631020 UBE2DNLQ8IWF7 75 aa12.87□□□□□ -0.35
PNKP-224ENST00000631020 ZNF664Q8N3J9 261 aa12.87□□□□□ -0.35
PNKP-224ENST00000631020 TRBV10-1A0A0K0K1A3 114 aa12.86□□□□□ -0.35
PNKP-224ENST00000631020 GAS8-AS1O95177 125 aa12.86□□□□□ -0.35
PNKP-224ENST00000631020 LINC00694P0DN24 101 aa12.86□□□□□ -0.35
PNKP-224ENST00000631020 AMTP48728 403 aa12.86□□□□□ -0.35
PNKP-224ENST00000631020 FAM104BQ5XKR9 115 aa12.86□□□□□ -0.35
PNKP-224ENST00000631020 NEXN-AS1Q8NBZ9 246 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms