RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 PHLDA3Q9Y5J5 127 aa1.4□□□□□ -2.19
TCF4-264ENST00000628391 LENEPQ9Y5L5 61 aa1.4□□□□□ -2.19
TCF4-264ENST00000628391 SNURFQ9Y675 71 aa1.4□□□□□ -2.19
TCF4-264ENST00000628391 GOLGA4Q13439 2230 aaKnown RBP1.4□□□□□ -2.19
TCF4-264ENST00000628391 ARID1BQ8NFD5 2236 aaPredicted RBP1.4□□□□□ -2.19
TCF4-264ENST00000628391 NOTCH4Q99466 2003 aa1.4□□□□□ -2.19
TCF4-264ENST00000628391 ESPL1Q14674 2120 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 IGLV4-3A0A075B6K6 122 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 TRAV21A0A0B4J279 112 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 A0A0J9YXV3 536 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 SPTY2D1-AS1A0A0U1RR47 76 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 hDV103S1A0JD37 113 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 VCYO14598 125 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 IGLV3-19P01714 112 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 IGHV3-9P01782 118 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 TFF1P04155 84 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 CCL3P10147 92 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 VPREB1P12018 145 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 FOLR3P41439 243 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 POLR2KP53803 58 aaKnown RBP1.39□□□□□ -2.19
TCF4-264ENST00000628391 RPL39P62891 51 aaKnown RBP1.39□□□□□ -2.19
TCF4-264ENST00000628391 CXCL6P80162 114 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 NREPQ16612 68 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 MRGPRG-AS1Q2M3A8 158 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 HCP5Q6MZN7 132 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 CLEC19AQ6UXS0 136 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 C9orf47Q6ZRZ4 202 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 C7orf65Q6ZTY9 151 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 LCA10Q71F78 164 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 PHF5AQ7RTV0 110 aaKnown RBP1.39□□□□□ -2.19
TCF4-264ENST00000628391 Q8N6K4 173 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.39□□□□□ -2.19
TCF4-264ENST00000628391 C20orf203Q8NBC4 194 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 LEAP2Q969E1 77 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 OPRPNQ99935 248 aaPredicted RBP1.39□□□□□ -2.19
TCF4-264ENST00000628391 RPP25Q9BUL9 199 aaKnown RBP1.39□□□□□ -2.19
TCF4-264ENST00000628391 Q9HAA7 133 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 ORMDL1Q9P0S3 153 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 C11orf21Q9P2W6 132 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 ALPK2Q86TB3 2170 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 FER1L5A0AVI2 2057 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 COL27A1Q8IZC6 1860 aaPredicted RBP1.39□□□□□ -2.19
TCF4-264ENST00000628391 USF3Q68DE3 2245 aa1.39□□□□□ -2.19
TCF4-264ENST00000628391 A0A0C4DFX4 3053 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 MED12Q93074 2177 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 DSCAML1Q8TD84 2053 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 IGLV5-45A0A087WSX0 123 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 A0A087WYN8 130 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 IGHV3-21A0A0B4J1V1 117 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 IGHV3-64DA0A0J9YX35 117 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 LOC100131303A0A0U1RQF7 123 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 A6NN06 94 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 C10orf142B7Z368 130 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 BUB1B-PAK6H3BSN5 160 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 K7EIM0 57 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 ZNHIT1O43257 154 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 S100A4P26447 101 aaKnown RBP1.38□□□□□ -2.19
TCF4-264ENST00000628391 NDPQ00604 133 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 SYCNQ0VAF6 134 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 PIK3CD-AS1Q5SR53 167 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 C9orf129Q5T035 196 aaKnown RBP1.38□□□□□ -2.19
TCF4-264ENST00000628391 SUMO4Q6EEV6 95 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 Q6ZRP5 223 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 Q6ZS52 159 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 Q6ZTC4 211 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 GPHB5Q86YW7 130 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 ABCA7Q8IZY2 2146 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 MIR7-3HGQ8N6C7 128 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 Q8NA96 180 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 ZNRF1Q8ND25 227 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 WFDC9Q8NEX5 89 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 LINC01560Q8TB33 94 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 DIRC1Q969H9 104 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 ZNF625Q96I27 306 aaPredicted RBP1.38□□□□□ -2.19
TCF4-264ENST00000628391 LINC00167Q96N53 147 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 GAFA1Q96PS6 74 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 ZNF580Q9UK33 172 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 KIF25-AS1Q9Y6Z4 181 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 CABIN1Q9Y6J0 2220 aa1.38□□□□□ -2.19
TCF4-264ENST00000628391 SZT2Q5T011 3432 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 IGHV1OR15-1A0A075B7D0 117 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 LOC110117498A0A087WWA1 95 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 A0A087WZ39 114 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 TRAV10A0A0B4J240 114 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 TRAV22A0A0B4J277 110 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 IGHV1-3A0A0C4DH29 117 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 IGLV5-39A0A0G2JS06 123 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 IGKV2-29A2NJV5 120 aaPredicted RBP1.37□□□□□ -2.19
TCF4-264ENST00000628391 EPOPA6NHQ4 379 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 A8MUN3 132 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 H3BQ85 93 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 NCR3O14931 201 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 LECT2O14960 151 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 LY6G6DO95868 133 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 RFPL3SP0C7P2 107 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 PRB4P10163 310 aaPredicted RBP1.37□□□□□ -2.19
TCF4-264ENST00000628391 RNASE3P12724 160 aaKnown RBP1.37□□□□□ -2.19
TCF4-264ENST00000628391 CCL4P13236 92 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 PDE6GP18545 87 aa1.37□□□□□ -2.19
TCF4-264ENST00000628391 MNX1P50219 401 aaPredicted RBP1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms