RNA–Protein interactions for RNA: ENST00000626012.2

HDAC10-222, Transcript of histone deacetylase 10, human

TSL 5 BASIC

Gene HDAC10, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC10-222	ENST00000626012	C11orf44	Q8N8P7	122 aa		12.96	□□□□□ -0.33
HDAC10-222	ENST00000626012	ZNF876P	Q49A33	203 aa		12.95	□□□□□ -0.34
HDAC10-222	ENST00000626012		K7EMT4	169 aa		12.95	□□□□□ -0.34
HDAC10-222	ENST00000626012	BRI3	O95415	125 aa		12.95	□□□□□ -0.34
HDAC10-222	ENST00000626012	LINC01356	Q8N9X3	169 aa		12.95	□□□□□ -0.34
HDAC10-222	ENST00000626012		E9PLD3	99 aa		12.94	□□□□□ -0.34
HDAC10-222	ENST00000626012	KHDC1L	Q5JSQ8	128 aa		12.94	□□□□□ -0.34
HDAC10-222	ENST00000626012		M0QY20	66 aa		12.94	□□□□□ -0.34
HDAC10-222	ENST00000626012	APOM	O95445	188 aa		12.93	□□□□□ -0.34
HDAC10-222	ENST00000626012	COX6B1	P14854	86 aa		12.93	□□□□□ -0.34
HDAC10-222	ENST00000626012	SNRPD3	P62318	126 aa	Known RBP	12.93	□□□□□ -0.34
HDAC10-222	ENST00000626012	ZNF702P	Q9H963	129 aa		12.93	□□□□□ -0.34
HDAC10-222	ENST00000626012	MED14OS	P0DP75	135 aa		12.93	□□□□□ -0.34
HDAC10-222	ENST00000626012	TCTEX1D4	Q5JR98	221 aa		12.93	□□□□□ -0.34
HDAC10-222	ENST00000626012	C9orf85	Q96MD7	179 aa		12.93	□□□□□ -0.34
HDAC10-222	ENST00000626012	KIR2DL4	Q99706	377 aa		12.93	□□□□□ -0.34
HDAC10-222	ENST00000626012	INSL3	P51460	131 aa		12.92	□□□□□ -0.34
HDAC10-222	ENST00000626012	SRSF9	Q13242	221 aa	Known RBP eCLIP	12.92	□□□□□ -0.34
HDAC10-222	ENST00000626012	NBEAL2	Q6ZNJ1	2754 aa		12.92	□□□□□ -0.34
HDAC10-222	ENST00000626012	IGHV1OR15-1	A0A075B7D0	117 aa		12.92	□□□□□ -0.34
HDAC10-222	ENST00000626012		G3V4G9	280 aa		12.92	□□□□□ -0.34
HDAC10-222	ENST00000626012	DEFB131A	P59861	70 aa		12.92	□□□□□ -0.34
HDAC10-222	ENST00000626012	ETDB	Q3ZM63	59 aa		12.92	□□□□□ -0.34
HDAC10-222	ENST00000626012	POM121L12	Q8N7R1	296 aa		12.92	□□□□□ -0.34
HDAC10-222	ENST00000626012	PGPEP1	Q9NXJ5	209 aa		12.92	□□□□□ -0.34
HDAC10-222	ENST00000626012	RBMY1B	A6NDE4	496 aa	Known RBP	12.92	□□□□□ -0.34
HDAC10-222	ENST00000626012	RBMY1E	A6NEQ0	496 aa	Known RBP	12.92	□□□□□ -0.34
HDAC10-222	ENST00000626012	RBMY1D	P0C7P1	496 aa	Known RBP	12.92	□□□□□ -0.34
HDAC10-222	ENST00000626012	FN1	P02751	2386 aa	Known RBP	12.92	□□□□□ -0.34
HDAC10-222	ENST00000626012	ADARB2-AS1	A8MUL3	147 aa		12.91	□□□□□ -0.34
HDAC10-222	ENST00000626012	VCY	O14598	125 aa		12.91	□□□□□ -0.34
HDAC10-222	ENST00000626012	LINC01549	A6NIU2	74 aa		12.91	□□□□□ -0.34
HDAC10-222	ENST00000626012	OR5A1	Q8NGJ0	315 aa		12.91	□□□□□ -0.34
HDAC10-222	ENST00000626012	VPREB3	Q9UKI3	123 aa		12.91	□□□□□ -0.34
HDAC10-222	ENST00000626012	FOXI2	Q6ZQN5	318 aa		12.9	□□□□□ -0.34
HDAC10-222	ENST00000626012	PMVK	Q15126	192 aa		12.9	□□□□□ -0.35
HDAC10-222	ENST00000626012		Q6ZSN1	163 aa		12.9	□□□□□ -0.35
HDAC10-222	ENST00000626012	LGALS9	O00182	355 aa		12.89	□□□□□ -0.35
HDAC10-222	ENST00000626012	RRN3P1	Q2M238	152 aa		12.89	□□□□□ -0.35
HDAC10-222	ENST00000626012	HIST2H2BC	Q6DN03	193 aa		12.89	□□□□□ -0.35
HDAC10-222	ENST00000626012	TRBV7-9	A0A0J9YWB2	115 aa		12.88	□□□□□ -0.35
HDAC10-222	ENST00000626012	TRBV27	A0A0K0K1C4	114 aa		12.88	□□□□□ -0.35
HDAC10-222	ENST00000626012	IGHV4-31	P0DP07	118 aa		12.88	□□□□□ -0.35
HDAC10-222	ENST00000626012	TMEM61	Q8N0U2	210 aa		12.88	□□□□□ -0.35
HDAC10-222	ENST00000626012	MRPL16	Q9NX20	251 aa	Known RBP	12.88	□□□□□ -0.35
HDAC10-222	ENST00000626012	NOTCH2	Q04721	2471 aa		12.87	□□□□□ -0.35
HDAC10-222	ENST00000626012		A0A0J9YXV3	536 aa		12.87	□□□□□ -0.35
HDAC10-222	ENST00000626012	SPAG8	Q99932	426 aa	Predicted RBP	12.87	□□□□□ -0.35
HDAC10-222	ENST00000626012	IGHV3-38	A0A0C4DH36	116 aa		12.87	□□□□□ -0.35
HDAC10-222	ENST00000626012	LOC107984156	A0A0G2JMH3	177 aa		12.87	□□□□□ -0.35
HDAC10-222	ENST00000626012		A0A0J9YY99	117 aa		12.87	□□□□□ -0.35
HDAC10-222	ENST00000626012	ARL17A	Q8IVW1	177 aa		12.87	□□□□□ -0.35
HDAC10-222	ENST00000626012	GCN1	Q92616	2671 aa	Known RBP	12.86	□□□□□ -0.35
HDAC10-222	ENST00000626012		A8MZ25	164 aa		12.86	□□□□□ -0.35
HDAC10-222	ENST00000626012		Q6YL49	198 aa		12.85	□□□□□ -0.35
HDAC10-222	ENST00000626012		A0A1W2PRX2	142 aa		12.85	□□□□□ -0.35
HDAC10-222	ENST00000626012	PTH2	Q96A98	100 aa		12.85	□□□□□ -0.35
HDAC10-222	ENST00000626012	AMELX	Q99217	191 aa		12.85	□□□□□ -0.35
HDAC10-222	ENST00000626012	PPP1R17	O96001	155 aa		12.84	□□□□□ -0.35
HDAC10-222	ENST00000626012	TAL2	Q16559	108 aa		12.84	□□□□□ -0.35
HDAC10-222	ENST00000626012	SPANXB1	Q9NS25	103 aa	Predicted RBP	12.84	□□□□□ -0.35
HDAC10-222	ENST00000626012	HELZ2	Q9BYK8	2649 aa	Known RBP	12.84	□□□□□ -0.35
HDAC10-222	ENST00000626012	TSPAN13	O95857	204 aa		12.84	□□□□□ -0.35
HDAC10-222	ENST00000626012	VWF	P04275	2813 aa		12.84	□□□□□ -0.35
HDAC10-222	ENST00000626012		H7C2G1	150 aa		12.83	□□□□□ -0.36
HDAC10-222	ENST00000626012	GATA3	P23771	443 aa		12.83	□□□□□ -0.36
HDAC10-222	ENST00000626012	DLX4	Q92988	240 aa	Predicted RBP	12.83	□□□□□ -0.36
HDAC10-222	ENST00000626012	FAM104A	Q969W3	186 aa		12.83	□□□□□ -0.36
HDAC10-222	ENST00000626012	IGHV3OR16-12	A0A075B7B8	117 aa		12.83	□□□□□ -0.36
HDAC10-222	ENST00000626012	EIF4EBP3	O60516	100 aa	Predicted RBP	12.83	□□□□□ -0.36
HDAC10-222	ENST00000626012	SYT8	Q8NBV8	401 aa		12.83	□□□□□ -0.36
HDAC10-222	ENST00000626012	TRAV8-3	A0A0A6YYJ7	113 aa		12.82	□□□□□ -0.36
HDAC10-222	ENST00000626012		Q5PR19	223 aa		12.82	□□□□□ -0.36
HDAC10-222	ENST00000626012	ZNF418	Q8TF45	676 aa	Predicted RBP	12.82	□□□□□ -0.36
HDAC10-222	ENST00000626012	UBE2E2	Q96LR5	201 aa		12.82	□□□□□ -0.36
HDAC10-222	ENST00000626012	PRO0461	Q9UI25	63 aa		12.82	□□□□□ -0.36
HDAC10-222	ENST00000626012		J3QQQ9	107 aa		12.82	□□□□□ -0.36
HDAC10-222	ENST00000626012		Q96MF0	132 aa		12.82	□□□□□ -0.36
HDAC10-222	ENST00000626012	TIMM17A	Q99595	171 aa		12.82	□□□□□ -0.36
HDAC10-222	ENST00000626012	SPX	Q9BT56	116 aa		12.82	□□□□□ -0.36
HDAC10-222	ENST00000626012	GTSF1L	Q9H1H1	148 aa		12.82	□□□□□ -0.36
HDAC10-222	ENST00000626012		A0A1B0GWB2	263 aa		12.81	□□□□□ -0.36
HDAC10-222	ENST00000626012	PSMB2	P49721	201 aa		12.81	□□□□□ -0.36
HDAC10-222	ENST00000626012	C20orf203	Q8NBC4	194 aa		12.81	□□□□□ -0.36
HDAC10-222	ENST00000626012	IGLV4-3	A0A075B6K6	122 aa		12.81	□□□□□ -0.36
HDAC10-222	ENST00000626012	CD28	P10747	220 aa		12.81	□□□□□ -0.36
HDAC10-222	ENST00000626012	SMCP	P49901	116 aa	Predicted RBP	12.81	□□□□□ -0.36
HDAC10-222	ENST00000626012	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	12.8	□□□□□ -0.36
HDAC10-222	ENST00000626012	TRBV6-5	A0A0K0K1A5	114 aa		12.8	□□□□□ -0.36
HDAC10-222	ENST00000626012	IGKV2-29	A2NJV5	120 aa	Predicted RBP	12.8	□□□□□ -0.36
HDAC10-222	ENST00000626012		H3BMM0	161 aa		12.8	□□□□□ -0.36
HDAC10-222	ENST00000626012	COTL1	Q14019	142 aa		12.8	□□□□□ -0.36
HDAC10-222	ENST00000626012	TRPT1	Q86TN4	253 aa	Known RBP	12.8	□□□□□ -0.36
HDAC10-222	ENST00000626012	RAX2	Q96IS3	184 aa		12.8	□□□□□ -0.36
HDAC10-222	ENST00000626012	TSSC4	Q9Y5U2	329 aa	Predicted RBP	12.8	□□□□□ -0.36
HDAC10-222	ENST00000626012	CFC1B	P0CG36	223 aa		12.8	□□□□□ -0.36
HDAC10-222	ENST00000626012	CFC1	P0CG37	223 aa		12.8	□□□□□ -0.36
HDAC10-222	ENST00000626012	ZNF22	P17026	224 aa	Predicted RBP	12.8	□□□□□ -0.36
HDAC10-222	ENST00000626012	UBE2D1	P51668	147 aa		12.8	□□□□□ -0.36
HDAC10-222	ENST00000626012	GAGE13	Q4V321	117 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms